RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 KIR2DL5BA0A0G2JPC4 375 aa15.18■□□□□ 0.02
PKNOX1-202ENST00000418336 A0A1W2PS18 150 aa15.18■□□□□ 0.02
PKNOX1-202ENST00000418336 BUB3O43684 328 aa15.18■□□□□ 0.02
PKNOX1-202ENST00000418336 KIR2DL5AQ8N109 375 aa15.18■□□□□ 0.02
PKNOX1-202ENST00000418336 KIR2DL5BQ8NHK3 375 aa15.18■□□□□ 0.02
PKNOX1-202ENST00000418336 TMEM231Q9H6L2 316 aa15.18■□□□□ 0.02
PKNOX1-202ENST00000418336 PTTG2Q9NZH5 202 aa15.18■□□□□ 0.02
PKNOX1-202ENST00000418336 H3BP45 60 aa15.17■□□□□ 0.02
PKNOX1-202ENST00000418336 RAB11AP62491 216 aa15.17■□□□□ 0.02
PKNOX1-202ENST00000418336 ASAH1Q13510 395 aa15.17■□□□□ 0.02
PKNOX1-202ENST00000418336 WFDC3Q8IUB2 231 aa15.17■□□□□ 0.02
PKNOX1-202ENST00000418336 ZBTB8BQ8NAP8 495 aaPredicted RBP15.17■□□□□ 0.02
PKNOX1-202ENST00000418336 OR51G1Q8NGK1 321 aa15.17■□□□□ 0.02
PKNOX1-202ENST00000418336 S100ZQ8WXG8 99 aa15.17■□□□□ 0.02
PKNOX1-202ENST00000418336 RNF125Q96EQ8 232 aa15.17■□□□□ 0.02
PKNOX1-202ENST00000418336 SLC35E1Q96K37 410 aa15.17■□□□□ 0.02
PKNOX1-202ENST00000418336 TRGV9Q99603 122 aa15.17■□□□□ 0.02
PKNOX1-202ENST00000418336 SEC22CQ9BRL7 303 aa15.17■□□□□ 0.02
PKNOX1-202ENST00000418336 NUDT15Q9NV35 164 aa15.17■□□□□ 0.02
PKNOX1-202ENST00000418336 RCL1Q9Y2P8 373 aaKnown RBP15.17■□□□□ 0.02
PKNOX1-202ENST00000418336 TRAV6A0A075B6T7 132 aa15.16■□□□□ 0.02
PKNOX1-202ENST00000418336 CCNKO75909 580 aa15.16■□□□□ 0.02
PKNOX1-202ENST00000418336 NKX2-1P43699 371 aaPredicted RBP15.16■□□□□ 0.02
PKNOX1-202ENST00000418336 TMEM182Q6ZP80 229 aaPredicted RBP15.16■□□□□ 0.02
PKNOX1-202ENST00000418336 Q6ZWC4 215 aa15.16■□□□□ 0.02
PKNOX1-202ENST00000418336 IFNA21P01568 189 aa15.15■□□□□ 0.02
PKNOX1-202ENST00000418336 RPL35AP18077 110 aaKnown RBP15.15■□□□□ 0.02
PKNOX1-202ENST00000418336 CMC4P56277 68 aaPredicted RBP15.15■□□□□ 0.02
PKNOX1-202ENST00000418336 PAFAH1B2P68402 229 aa15.15■□□□□ 0.02
PKNOX1-202ENST00000418336 IAH1Q2TAA2 248 aaPredicted RBP15.15■□□□□ 0.02
PKNOX1-202ENST00000418336 SPANXN5Q5MJ07 72 aa15.15■□□□□ 0.02
PKNOX1-202ENST00000418336 TMEM14EPQ6UXP3 125 aa15.15■□□□□ 0.02
PKNOX1-202ENST00000418336 GRAMD2BQ96HH9 432 aa15.15■□□□□ 0.02
PKNOX1-202ENST00000418336 SMIM8Q96KF7 97 aa15.15■□□□□ 0.02
PKNOX1-202ENST00000418336 C11orf1Q9H5F2 150 aa15.15■□□□□ 0.02
PKNOX1-202ENST00000418336 TP53TG1Q9Y2A0 90 aa15.15■□□□□ 0.02
PKNOX1-202ENST00000418336 ZFP92A6NM28 416 aa15.14■□□□□ 0.01
PKNOX1-202ENST00000418336 UBE2CO00762 179 aa15.14■□□□□ 0.01
PKNOX1-202ENST00000418336 CCSO14618 274 aa15.14■□□□□ 0.01
PKNOX1-202ENST00000418336 APOC4P55056 127 aa15.14■□□□□ 0.01
PKNOX1-202ENST00000418336 DEFB131AP59861 70 aa15.14■□□□□ 0.01
PKNOX1-202ENST00000418336 OR8G2PQ6IF36 304 aa15.14■□□□□ 0.01
PKNOX1-202ENST00000418336 ZNF431Q8TF32 576 aaPredicted RBP15.14■□□□□ 0.01
PKNOX1-202ENST00000418336 RNF183Q96D59 192 aa15.14■□□□□ 0.01
PKNOX1-202ENST00000418336 AGRNO00468 2067 aa15.13■□□□□ 0.01
PKNOX1-202ENST00000418336 SSSCA1O60232 199 aa15.13■□□□□ 0.01
PKNOX1-202ENST00000418336 UPK1BO75841 260 aa15.13■□□□□ 0.01
PKNOX1-202ENST00000418336 MBPP02686 304 aaPredicted RBP15.13■□□□□ 0.01
PKNOX1-202ENST00000418336 GIG44P09565 113 aaPredicted RBP15.13■□□□□ 0.01
PKNOX1-202ENST00000418336 LYL1P12980 280 aa15.13■□□□□ 0.01
PKNOX1-202ENST00000418336 EIF2B2P49770 351 aaKnown RBP15.13■□□□□ 0.01
PKNOX1-202ENST00000418336 RPP30P78346 268 aaKnown RBP15.13■□□□□ 0.01
PKNOX1-202ENST00000418336 EWSR1Q01844 656 aaKnown RBP eCLIP15.13■□□□□ 0.014e-7■■■■□ 19.7
PKNOX1-202ENST00000418336 IL15RAQ13261 267 aa15.13■□□□□ 0.01
PKNOX1-202ENST00000418336 DEFB135Q30KP9 77 aa15.13■□□□□ 0.01
PKNOX1-202ENST00000418336 LEMD1Q68G75 181 aa15.13■□□□□ 0.01
PKNOX1-202ENST00000418336 ACOT7LQ6ZUV0 252 aa15.13■□□□□ 0.01
PKNOX1-202ENST00000418336 STXBP6Q8NFX7 210 aa15.13■□□□□ 0.01
PKNOX1-202ENST00000418336 C17orf77Q96MU5 243 aa15.13■□□□□ 0.01
PKNOX1-202ENST00000418336 PSENENQ9NZ42 101 aa15.13■□□□□ 0.01
PKNOX1-202ENST00000418336 RABAC1Q9UI14 185 aa15.13■□□□□ 0.01
PKNOX1-202ENST00000418336 STRAPQ9Y3F4 350 aaKnown RBP15.13■□□□□ 0.01
PKNOX1-202ENST00000418336 DNASE2O00115 360 aaPredicted RBP15.12■□□□□ 0.01
PKNOX1-202ENST00000418336 H2AFB2P0C5Z0 115 aa15.12■□□□□ 0.01
PKNOX1-202ENST00000418336 RPL11P62913 178 aaKnown RBP15.12■□□□□ 0.01
PKNOX1-202ENST00000418336 PAIP2BQ9ULR5 123 aaKnown RBP15.12■□□□□ 0.01
PKNOX1-202ENST00000418336 ALMS1Q8TCU4 4167 aa15.12■□□□□ 0.01
PKNOX1-202ENST00000418336 TENM2Q9NT68 2774 aa15.12■□□□□ 0.01
PKNOX1-202ENST00000418336 HELTA6NFD8 242 aa15.11■□□□□ 0.01
PKNOX1-202ENST00000418336 TAS2R30P59541 319 aa15.11■□□□□ 0.01
PKNOX1-202ENST00000418336 ARL16Q0P5N6 197 aa15.11■□□□□ 0.01
PKNOX1-202ENST00000418336 ZFAND6Q6FIF0 208 aa15.11■□□□□ 0.01
PKNOX1-202ENST00000418336 NARS2Q96I59 477 aaKnown RBP15.11■□□□□ 0.01
PKNOX1-202ENST00000418336 WDR12Q9GZL7 423 aaKnown RBP15.11■□□□□ 0.01
PKNOX1-202ENST00000418336 C7orf66A4D0T2 115 aa15.1■□□□□ 0.01
PKNOX1-202ENST00000418336 SOCS3O14543 225 aa15.1■□□□□ 0.01
PKNOX1-202ENST00000418336 SPRY2O43597 315 aa15.1■□□□□ 0.01
PKNOX1-202ENST00000418336 ZNF688P0C7X2 276 aa15.1■□□□□ 0.01
PKNOX1-202ENST00000418336 GATA2P23769 480 aaPredicted RBP15.1■□□□□ 0.01
PKNOX1-202ENST00000418336 OR2F1Q13607 317 aa15.1■□□□□ 0.01
PKNOX1-202ENST00000418336 ZNF846Q147U1 533 aa15.1■□□□□ 0.01
PKNOX1-202ENST00000418336 SIGLEC15Q6ZMC9 328 aa15.1■□□□□ 0.01
PKNOX1-202ENST00000418336 TMEM144Q7Z5S9 345 aa15.1■□□□□ 0.01
PKNOX1-202ENST00000418336 TRPT1Q86TN4 253 aaKnown RBP15.1■□□□□ 0.01
PKNOX1-202ENST00000418336 PBDC1Q9BVG4 233 aa15.1■□□□□ 0.01
PKNOX1-202ENST00000418336 CSTL1Q9H114 145 aa15.1■□□□□ 0.01
PKNOX1-202ENST00000418336 FAM240BA0A1B0GVZ2 78 aa15.09■□□□□ 0.01
PKNOX1-202ENST00000418336 TSC22D2O75157 780 aa15.09■□□□□ 0.01
PKNOX1-202ENST00000418336 LYZP61626 148 aa15.09■□□□□ 0.01
PKNOX1-202ENST00000418336 C12orf45Q8N5I9 185 aaPredicted RBP15.09■□□□□ 0.01
PKNOX1-202ENST00000418336 RAB40CQ96S21 281 aa15.09■□□□□ 0.01
PKNOX1-202ENST00000418336 NRN1Q9NPD7 142 aa15.09■□□□□ 0.01
PKNOX1-202ENST00000418336 SNRPGP15A8MWD9 76 aa15.08■□□□□ 0
PKNOX1-202ENST00000418336 SCGB1D2O95969 90 aa15.08■□□□□ 0
PKNOX1-202ENST00000418336 IL5P05113 134 aa15.08■□□□□ 0
PKNOX1-202ENST00000418336 METTL15P1P0C7V9 234 aa15.08■□□□□ 0
PKNOX1-202ENST00000418336 AP2S1P53680 142 aaPredicted RBP15.08■□□□□ 0
PKNOX1-202ENST00000418336 SEPSECSQ9HD40 501 aaKnown RBP15.08■□□□□ 0
PKNOX1-202ENST00000418336 GSKIPQ9P0R6 139 aa15.08■□□□□ 0
PKNOX1-202ENST00000418336 KNCNA6PVL3 124 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms