RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 PUS1Q9Y606 427 aaKnown RBP eCLIP6.67□□□□□ -1.34
LINC01238-201ENST00000416204 VPS13BQ7Z7G8 4022 aa6.66□□□□□ -1.34
LINC01238-201ENST00000416204 A0A1B0GU03 582 aa6.66□□□□□ -1.34
LINC01238-201ENST00000416204 MARCH11A6NNE9 402 aa6.66□□□□□ -1.34
LINC01238-201ENST00000416204 K7EQG2 157 aa6.66□□□□□ -1.34
LINC01238-201ENST00000416204 PPYP01298 95 aa6.66□□□□□ -1.34
LINC01238-201ENST00000416204 TAS2R46P59540 309 aa6.66□□□□□ -1.34
LINC01238-201ENST00000416204 ERVK-16P61578 105 aa6.66□□□□□ -1.34
LINC01238-201ENST00000416204 POU2AF1Q16633 256 aa6.66□□□□□ -1.34
LINC01238-201ENST00000416204 SPINK9Q5DT21 86 aa6.66□□□□□ -1.34
LINC01238-201ENST00000416204 PSMG4Q5JS54 123 aa6.66□□□□□ -1.34
LINC01238-201ENST00000416204 SPATA12Q7Z6I5 190 aa6.66□□□□□ -1.34
LINC01238-201ENST00000416204 HOGA1Q86XE5 327 aa6.66□□□□□ -1.34
LINC01238-201ENST00000416204 C9orf62Q8N4C0 152 aa6.66□□□□□ -1.34
LINC01238-201ENST00000416204 MOB3AQ96BX8 217 aa6.66□□□□□ -1.34
LINC01238-201ENST00000416204 AIFM2Q9BRQ8 373 aa6.66□□□□□ -1.34
LINC01238-201ENST00000416204 GINS3Q9BRX5 216 aa6.66□□□□□ -1.34
LINC01238-201ENST00000416204 ZFAND3Q9H8U3 227 aa6.66□□□□□ -1.34
LINC01238-201ENST00000416204 HSPB11Q9Y547 144 aa6.66□□□□□ -1.34
LINC01238-201ENST00000416204 M0QYG6 137 aa6.65□□□□□ -1.34
LINC01238-201ENST00000416204 RBFOX2O43251 390 aaKnown RBP eCLIP6.65□□□□□ -1.34
LINC01238-201ENST00000416204 IGKV3-20P01619 116 aa6.65□□□□□ -1.34
LINC01238-201ENST00000416204 OR4E1P0C645 316 aa6.65□□□□□ -1.34
LINC01238-201ENST00000416204 LPAR6P43657 344 aa6.65□□□□□ -1.34
LINC01238-201ENST00000416204 DEFB1P60022 68 aa6.65□□□□□ -1.34
LINC01238-201ENST00000416204 CATR1Q13166 79 aa6.65□□□□□ -1.34
LINC01238-201ENST00000416204 C4orf46Q504U0 113 aa6.65□□□□□ -1.34
LINC01238-201ENST00000416204 THOC7Q6I9Y2 204 aaKnown RBP6.65□□□□□ -1.34
LINC01238-201ENST00000416204 TMEM88Q6PEY1 159 aa6.65□□□□□ -1.34
LINC01238-201ENST00000416204 GSG1LQ6UXU4 331 aa6.65□□□□□ -1.34
LINC01238-201ENST00000416204 HSD17B13Q7Z5P4 300 aaPredicted RBP6.65□□□□□ -1.34
LINC01238-201ENST00000416204 C12orf45Q8N5I9 185 aaPredicted RBP6.65□□□□□ -1.34
LINC01238-201ENST00000416204 OR13C8Q8NGS7 320 aa6.65□□□□□ -1.34
LINC01238-201ENST00000416204 OR2T35Q8NGX2 323 aa6.65□□□□□ -1.34
LINC01238-201ENST00000416204 OR1P1Q8NH06 330 aa6.65□□□□□ -1.34
LINC01238-201ENST00000416204 TERB2Q8NHR7 220 aa6.65□□□□□ -1.34
LINC01238-201ENST00000416204 RAB40CQ96S21 281 aa6.65□□□□□ -1.34
LINC01238-201ENST00000416204 PLEKHA2Q9HB19 425 aa6.65□□□□□ -1.34
LINC01238-201ENST00000416204 A0A0B4J2A0 478 aa6.64□□□□□ -1.35
LINC01238-201ENST00000416204 HMSDA8MTL9 139 aa6.64□□□□□ -1.35
LINC01238-201ENST00000416204 SMLR1H3BR10 107 aa6.64□□□□□ -1.35
LINC01238-201ENST00000416204 SPART-AS1P0CW21 52 aa6.64□□□□□ -1.35
LINC01238-201ENST00000416204 HRH1P35367 487 aa6.64□□□□□ -1.35
LINC01238-201ENST00000416204 P2RY1P47900 373 aa6.64□□□□□ -1.35
LINC01238-201ENST00000416204 FGL1Q08830 312 aa6.64□□□□□ -1.35
LINC01238-201ENST00000416204 DHRS2Q13268 280 aa6.64□□□□□ -1.35
LINC01238-201ENST00000416204 SURF2Q15527 256 aaPredicted RBP6.64□□□□□ -1.35
LINC01238-201ENST00000416204 SCGB2B2Q4G0G5 96 aa6.64□□□□□ -1.35
LINC01238-201ENST00000416204 TMEM41BQ5BJD5 291 aa6.64□□□□□ -1.35
LINC01238-201ENST00000416204 Q5BKY6 102 aa6.64□□□□□ -1.35
LINC01238-201ENST00000416204 OR5H2Q8NGV7 314 aa6.64□□□□□ -1.35
LINC01238-201ENST00000416204 ATP6V0BQ99437 205 aa6.64□□□□□ -1.35
LINC01238-201ENST00000416204 COMMD9Q9P000 198 aa6.64□□□□□ -1.35
LINC01238-201ENST00000416204 SHPKQ9UHJ6 478 aa6.64□□□□□ -1.35
LINC01238-201ENST00000416204 NACAE9PAV3 2078 aa6.64□□□□□ -1.35
LINC01238-201ENST00000416204 TRAV2A0A0B4J234 112 aa6.63□□□□□ -1.35
LINC01238-201ENST00000416204 IFNA7P01567 189 aa6.63□□□□□ -1.35
LINC01238-201ENST00000416204 PMP2P02689 132 aa6.63□□□□□ -1.35
LINC01238-201ENST00000416204 FUSP35637 526 aaKnown RBP eCLIP6.63□□□□□ -1.35
LINC01238-201ENST00000416204 KRTAP10-2P60368 255 aa6.63□□□□□ -1.35
LINC01238-201ENST00000416204 LGALSLQ3ZCW2 172 aaPredicted RBP6.63□□□□□ -1.35
LINC01238-201ENST00000416204 FAM222AQ5U5X8 452 aa6.63□□□□□ -1.35
LINC01238-201ENST00000416204 C6orf223Q8N319 242 aa6.63□□□□□ -1.35
LINC01238-201ENST00000416204 ZBTB34Q8NCN2 500 aa6.63□□□□□ -1.35
LINC01238-201ENST00000416204 OR11H4Q8NGC9 324 aa6.63□□□□□ -1.35
LINC01238-201ENST00000416204 OR5AP2Q8NGF4 316 aa6.63□□□□□ -1.35
LINC01238-201ENST00000416204 DCANP1Q8TF63 244 aa6.63□□□□□ -1.35
LINC01238-201ENST00000416204 MITD1Q8WV92 249 aa6.63□□□□□ -1.35
LINC01238-201ENST00000416204 TMEM56Q96MV1 263 aa6.63□□□□□ -1.35
LINC01238-201ENST00000416204 MRPL36Q9P0J6 103 aaKnown RBP6.63□□□□□ -1.35
LINC01238-201ENST00000416204 GPR132Q9UNW8 380 aa6.63□□□□□ -1.35
LINC01238-201ENST00000416204 TMED3Q9Y3Q3 217 aa6.63□□□□□ -1.35
LINC01238-201ENST00000416204 C9orf170A2RU37 121 aa6.62□□□□□ -1.35
LINC01238-201ENST00000416204 HELTA6NFD8 242 aa6.62□□□□□ -1.35
LINC01238-201ENST00000416204 G3V3Q6 166 aa6.62□□□□□ -1.35
LINC01238-201ENST00000416204 GOSR2O14653 212 aa6.62□□□□□ -1.35
LINC01238-201ENST00000416204 CD5P06127 495 aa6.62□□□□□ -1.35
LINC01238-201ENST00000416204 INAFM2P0DMQ5 153 aa6.62□□□□□ -1.35
LINC01238-201ENST00000416204 NPPCP23582 126 aa6.62□□□□□ -1.35
LINC01238-201ENST00000416204 GNRHRP30968 328 aa6.62□□□□□ -1.35
LINC01238-201ENST00000416204 TSPAN5P62079 268 aa6.62□□□□□ -1.35
LINC01238-201ENST00000416204 DLK1P80370 383 aa6.62□□□□□ -1.35
LINC01238-201ENST00000416204 IZUMO4Q1ZYL8 232 aa6.62□□□□□ -1.35
LINC01238-201ENST00000416204 RNF212Q495C1 297 aa6.62□□□□□ -1.35
LINC01238-201ENST00000416204 TMEM128Q5BJH2 165 aa6.62□□□□□ -1.35
LINC01238-201ENST00000416204 ZNF600Q6ZNG1 722 aa6.62□□□□□ -1.35
LINC01238-201ENST00000416204 TMED4Q7Z7H5 227 aa6.62□□□□□ -1.35
LINC01238-201ENST00000416204 LHFPL1Q86WI0 220 aa6.62□□□□□ -1.35
LINC01238-201ENST00000416204 GRAMD2BQ96HH9 432 aa6.62□□□□□ -1.35
LINC01238-201ENST00000416204 TXN2Q99757 166 aa6.62□□□□□ -1.35
LINC01238-201ENST00000416204 NIPSNAP3BQ9BS92 247 aa6.62□□□□□ -1.35
LINC01238-201ENST00000416204 ATG101Q9BSB4 218 aa6.62□□□□□ -1.35
LINC01238-201ENST00000416204 TMEM231Q9H6L2 316 aa6.62□□□□□ -1.35
LINC01238-201ENST00000416204 DKK2Q9UBU2 259 aa6.62□□□□□ -1.35
LINC01238-201ENST00000416204 PRNDQ9UKY0 176 aa6.62□□□□□ -1.35
LINC01238-201ENST00000416204 SRRM2Q9UQ35 2752 aaKnown RBP6.61□□□□□ -1.35
LINC01238-201ENST00000416204 NBDYA0A0U1RRE5 68 aa6.61□□□□□ -1.35
LINC01238-201ENST00000416204 EPM2AB3EWF7 344 aa6.61□□□□□ -1.35
LINC01238-201ENST00000416204 L7N2F9 121 aa6.61□□□□□ -1.35
LINC01238-201ENST00000416204 PGLYRP1O75594 196 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms