RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 TMED4Q7Z7H5 227 aa12.81□□□□□ -0.36
PDLIM2-208ENST00000416159 OR51G1Q8NGK1 321 aa12.81□□□□□ -0.36
PDLIM2-208ENST00000416159 DEDD2Q8WXF8 326 aa12.81□□□□□ -0.36
PDLIM2-208ENST00000416159 SLC35E1Q96K37 410 aa12.81□□□□□ -0.36
PDLIM2-208ENST00000416159 RAB40CQ96S21 281 aa12.81□□□□□ -0.36
PDLIM2-208ENST00000416159 NRN1Q9NPD7 142 aa12.81□□□□□ -0.36
PDLIM2-208ENST00000416159 PFDN2Q9UHV9 154 aa12.81□□□□□ -0.36
PDLIM2-208ENST00000416159 DEFB4AO15263 64 aa12.8□□□□□ -0.36
PDLIM2-208ENST00000416159 PITX3O75364 302 aa12.8□□□□□ -0.36
PDLIM2-208ENST00000416159 S100A5P33763 92 aa12.8□□□□□ -0.36
PDLIM2-208ENST00000416159 SNRPD3P62318 126 aaKnown RBP12.8□□□□□ -0.36
PDLIM2-208ENST00000416159 PSMG4Q5JS54 123 aa12.8□□□□□ -0.36
PDLIM2-208ENST00000416159 SIGLEC15Q6ZMC9 328 aa12.8□□□□□ -0.36
PDLIM2-208ENST00000416159 LRTM2Q8N967 370 aa12.8□□□□□ -0.36
PDLIM2-208ENST00000416159 SLC25A21Q9BQT8 299 aaPredicted RBP12.8□□□□□ -0.36
PDLIM2-208ENST00000416159 V9GYH0 126 aa12.8□□□□□ -0.36
PDLIM2-208ENST00000416159 CCDC160A6NGH7 325 aa12.79□□□□□ -0.36
PDLIM2-208ENST00000416159 ZFP92A6NM28 416 aa12.79□□□□□ -0.36
PDLIM2-208ENST00000416159 FAM90A26D6RGX4 464 aa12.79□□□□□ -0.36
PDLIM2-208ENST00000416159 SLC25A6P12236 298 aa12.79□□□□□ -0.36
PDLIM2-208ENST00000416159 MIFP14174 115 aa12.79□□□□□ -0.36
PDLIM2-208ENST00000416159 RAB11AP62491 216 aa12.79□□□□□ -0.36
PDLIM2-208ENST00000416159 GAMTQ14353 236 aa12.79□□□□□ -0.36
PDLIM2-208ENST00000416159 LGALS9CQ6DKI2 356 aa12.79□□□□□ -0.36
PDLIM2-208ENST00000416159 OR8G2PQ6IF36 304 aa12.79□□□□□ -0.36
PDLIM2-208ENST00000416159 Q8NAQ8 132 aa12.79□□□□□ -0.36
PDLIM2-208ENST00000416159 RNF125Q96EQ8 232 aa12.79□□□□□ -0.36
PDLIM2-208ENST00000416159 ZNF705EA8MWA4 302 aaPredicted RBP12.78□□□□□ -0.36
PDLIM2-208ENST00000416159 MED6O75586 246 aa12.78□□□□□ -0.36
PDLIM2-208ENST00000416159 FABP1P07148 127 aa12.78□□□□□ -0.36
PDLIM2-208ENST00000416159 C4BPBP20851 252 aa12.78□□□□□ -0.36
PDLIM2-208ENST00000416159 VAMP1P23763 118 aa12.78□□□□□ -0.36
PDLIM2-208ENST00000416159 PBDC1Q9BVG4 233 aa12.78□□□□□ -0.36
PDLIM2-208ENST00000416159 HRH4Q9H3N8 390 aa12.78□□□□□ -0.36
PDLIM2-208ENST00000416159 IGHV4-28A0A0C4DH34 117 aa12.77□□□□□ -0.37
PDLIM2-208ENST00000416159 SFT2D2O95562 160 aa12.77□□□□□ -0.37
PDLIM2-208ENST00000416159 TCTAP57738 103 aa12.77□□□□□ -0.37
PDLIM2-208ENST00000416159 NUTF2P61970 127 aaKnown RBP12.77□□□□□ -0.37
PDLIM2-208ENST00000416159 ZNF79Q15937 498 aa12.77□□□□□ -0.37
PDLIM2-208ENST00000416159 C2CD4CQ8TF44 421 aa12.77□□□□□ -0.37
PDLIM2-208ENST00000416159 TMED3Q9Y3Q3 217 aa12.77□□□□□ -0.37
PDLIM2-208ENST00000416159 IGKV1D-37A0A075B6S9 117 aa12.76□□□□□ -0.37
PDLIM2-208ENST00000416159 SNRPGP15A8MWD9 76 aa12.76□□□□□ -0.37
PDLIM2-208ENST00000416159 C11orf94C9JXX5 98 aa12.76□□□□□ -0.37
PDLIM2-208ENST00000416159 RBMY1A1P0DJD3 496 aaKnown RBP12.76□□□□□ -0.37
PDLIM2-208ENST00000416159 RBMY1CP0DJD4 496 aa12.76□□□□□ -0.37
PDLIM2-208ENST00000416159 IAPPP10997 89 aa12.76□□□□□ -0.37
PDLIM2-208ENST00000416159 RPP30P78346 268 aaKnown RBP12.76□□□□□ -0.37
PDLIM2-208ENST00000416159 ZNF90Q03938 601 aa12.76□□□□□ -0.37
PDLIM2-208ENST00000416159 RBMY1FQ15415 496 aaKnown RBP12.76□□□□□ -0.37
PDLIM2-208ENST00000416159 CCDC190Q86UF4 302 aa12.76□□□□□ -0.37
PDLIM2-208ENST00000416159 CSNK1G2-AS1Q8NCQ2 148 aa12.76□□□□□ -0.37
PDLIM2-208ENST00000416159 CIB3Q96Q77 187 aaPredicted RBP12.76□□□□□ -0.37
PDLIM2-208ENST00000416159 C1QTNF4Q9BXJ3 329 aa12.76□□□□□ -0.37
PDLIM2-208ENST00000416159 TBC1D24Q9ULP9 559 aa12.76□□□□□ -0.37
PDLIM2-208ENST00000416159 X6R8D5 127 aa12.76□□□□□ -0.37
PDLIM2-208ENST00000416159 H3BMM0 161 aa12.75□□□□□ -0.37
PDLIM2-208ENST00000416159 NKX2-1P43699 371 aaPredicted RBP12.75□□□□□ -0.37
PDLIM2-208ENST00000416159 PPP1R1AQ13522 171 aa12.75□□□□□ -0.37
PDLIM2-208ENST00000416159 C1orf194Q5T5A4 169 aa12.75□□□□□ -0.37
PDLIM2-208ENST00000416159 CENPSQ8N2Z9 138 aa12.75□□□□□ -0.37
PDLIM2-208ENST00000416159 TRGV9Q99603 122 aa12.75□□□□□ -0.37
PDLIM2-208ENST00000416159 CLEC5AQ9NY25 188 aa12.75□□□□□ -0.37
PDLIM2-208ENST00000416159 PAIP2BQ9ULR5 123 aaKnown RBP12.75□□□□□ -0.37
PDLIM2-208ENST00000416159 ID1P41134 155 aa12.74□□□□□ -0.37
PDLIM2-208ENST00000416159 LYZP61626 148 aa12.74□□□□□ -0.37
PDLIM2-208ENST00000416159 SYNGR2O43760 224 aa12.73□□□□□ -0.37
PDLIM2-208ENST00000416159 CFDP00746 253 aaPredicted RBP12.73□□□□□ -0.37
PDLIM2-208ENST00000416159 HOXB5P09067 269 aa12.73□□□□□ -0.37
PDLIM2-208ENST00000416159 HLA-DRB4P13762 266 aa12.73□□□□□ -0.37
PDLIM2-208ENST00000416159 UBE2MP61081 183 aaKnown RBP12.73□□□□□ -0.37
PDLIM2-208ENST00000416159 OR2F1Q13607 317 aa12.73□□□□□ -0.37
PDLIM2-208ENST00000416159 SPANXN2Q5MJ10 180 aa12.73□□□□□ -0.37
PDLIM2-208ENST00000416159 THAP8Q8NA92 274 aa12.73□□□□□ -0.37
PDLIM2-208ENST00000416159 PPP1R14BQ96C90 147 aa12.73□□□□□ -0.37
PDLIM2-208ENST00000416159 HLA-DRB4X5D2U9 266 aa12.73□□□□□ -0.37
PDLIM2-208ENST00000416159 ELOA3CA0A087WX78 387 aaPredicted RBP12.72□□□□□ -0.37
PDLIM2-208ENST00000416159 WRBO00258 174 aa12.72□□□□□ -0.37
PDLIM2-208ENST00000416159 HLA-DMBP28068 263 aa12.72□□□□□ -0.37
PDLIM2-208ENST00000416159 GGNBP1Q5YKI7 109 aa12.72□□□□□ -0.37
PDLIM2-208ENST00000416159 RPP25LQ8N5L8 163 aaKnown RBP12.72□□□□□ -0.37
PDLIM2-208ENST00000416159 MAGT1Q9H0U3 335 aa12.72□□□□□ -0.37
PDLIM2-208ENST00000416159 XCL2Q9UBD3 114 aa12.72□□□□□ -0.37
PDLIM2-208ENST00000416159 TRAV10A0A0B4J240 114 aa12.71□□□□□ -0.37
PDLIM2-208ENST00000416159 NAP1L6A6NFF2 107 aa12.71□□□□□ -0.37
PDLIM2-208ENST00000416159 IGLL5B9A064 214 aa12.71□□□□□ -0.37
PDLIM2-208ENST00000416159 ZNF701M0R085 212 aaPredicted RBP12.71□□□□□ -0.37
PDLIM2-208ENST00000416159 INPP1P49441 399 aa12.71□□□□□ -0.37
PDLIM2-208ENST00000416159 PSMB3P49720 205 aa12.71□□□□□ -0.37
PDLIM2-208ENST00000416159 OR8I2Q8N0Y5 310 aa12.71□□□□□ -0.37
PDLIM2-208ENST00000416159 LINC00052Q96N35 136 aa12.71□□□□□ -0.37
PDLIM2-208ENST00000416159 WDR12Q9GZL7 423 aaKnown RBP12.71□□□□□ -0.37
PDLIM2-208ENST00000416159 SRRQ9GZT4 340 aa12.71□□□□□ -0.37
PDLIM2-208ENST00000416159 RBM38Q9H0Z9 239 aaKnown RBP12.71□□□□□ -0.37
PDLIM2-208ENST00000416159 IGKV1OR2-108A0A075B7D4 117 aa12.7□□□□□ -0.38
PDLIM2-208ENST00000416159 DEDDO75618 318 aa12.7□□□□□ -0.38
PDLIM2-208ENST00000416159 FOXI2Q6ZQN5 318 aa12.7□□□□□ -0.38
PDLIM2-208ENST00000416159 SAV1Q9H4B6 383 aaPredicted RBP12.7□□□□□ -0.38
PDLIM2-208ENST00000416159 APLNQ9ULZ1 77 aa12.7□□□□□ -0.38
PDLIM2-208ENST00000416159 C9orf170A2RU37 121 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms