RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 BPIFCQ8NFQ6 507 aa10.97□□□□□ -0.65
SF3B1-204ENST00000414963 OR51G1Q8NGK1 321 aa10.97□□□□□ -0.65
SF3B1-204ENST00000414963 TMED6Q8WW62 240 aa10.97□□□□□ -0.65
SF3B1-204ENST00000414963 RFNGQ9Y644 331 aa10.97□□□□□ -0.65
SF3B1-204ENST00000414963 WI2-2373I1.2A0A1W2PRP0 233 aa10.96□□□□□ -0.65
SF3B1-204ENST00000414963 UMAD1C9J7I0 102 aa10.96□□□□□ -0.65
SF3B1-204ENST00000414963 YIF1AO95070 293 aa10.96□□□□□ -0.65
SF3B1-204ENST00000414963 MBP02144 154 aa10.96□□□□□ -0.65
SF3B1-204ENST00000414963 GATA2P23769 480 aaPredicted RBP10.96□□□□□ -0.65
SF3B1-204ENST00000414963 B2MP61769 119 aa10.96□□□□□ -0.65
SF3B1-204ENST00000414963 FFAR4Q5NUL3 377 aa10.96□□□□□ -0.65
SF3B1-204ENST00000414963 C18orf65Q6ZTR6 163 aa10.96□□□□□ -0.65
SF3B1-204ENST00000414963 NDUFA11Q86Y39 141 aa10.96□□□□□ -0.65
SF3B1-204ENST00000414963 GPHB5Q86YW7 130 aa10.96□□□□□ -0.65
SF3B1-204ENST00000414963 LURAP1LQ8IV03 231 aa10.96□□□□□ -0.65
SF3B1-204ENST00000414963 ZNF680Q8NEM1 530 aa10.96□□□□□ -0.65
SF3B1-204ENST00000414963 OR5B12Q96R08 314 aa10.96□□□□□ -0.65
SF3B1-204ENST00000414963 C19orf24Q9BVV8 132 aa10.96□□□□□ -0.65
SF3B1-204ENST00000414963 PLA2G2EQ9NZK7 142 aa10.96□□□□□ -0.65
SF3B1-204ENST00000414963 ADARB2-AS1A8MUL3 147 aa10.95□□□□□ -0.66
SF3B1-204ENST00000414963 NDUFA4O00483 81 aa10.95□□□□□ -0.66
SF3B1-204ENST00000414963 RAB5CP51148 216 aa10.95□□□□□ -0.66
SF3B1-204ENST00000414963 IFITM2Q01629 132 aa10.95□□□□□ -0.66
SF3B1-204ENST00000414963 TOMM20LQ6UXN7 152 aa10.95□□□□□ -0.66
SF3B1-204ENST00000414963 Q6ZRG5 221 aa10.95□□□□□ -0.66
SF3B1-204ENST00000414963 C11orf44Q8N8P7 122 aa10.95□□□□□ -0.66
SF3B1-204ENST00000414963 KLHL30-AS1Q8NEE0 82 aa10.95□□□□□ -0.66
SF3B1-204ENST00000414963 TMEM158Q8WZ71 300 aa10.95□□□□□ -0.66
SF3B1-204ENST00000414963 ELOA3CA0A087WX78 387 aaPredicted RBP10.94□□□□□ -0.66
SF3B1-204ENST00000414963 IFNA7P01567 189 aa10.94□□□□□ -0.66
SF3B1-204ENST00000414963 M6PRP20645 277 aa10.94□□□□□ -0.66
SF3B1-204ENST00000414963 ZP3P21754 424 aa10.94□□□□□ -0.66
SF3B1-204ENST00000414963 SULT1A2P50226 295 aa10.94□□□□□ -0.66
SF3B1-204ENST00000414963 ACOT6Q3I5F7 207 aaPredicted RBP10.94□□□□□ -0.66
SF3B1-204ENST00000414963 KHDC1LQ5JSQ8 128 aa10.94□□□□□ -0.66
SF3B1-204ENST00000414963 ALKAL2Q6UX46 152 aa10.94□□□□□ -0.66
SF3B1-204ENST00000414963 OR1N2Q8NGR9 330 aa10.94□□□□□ -0.66
SF3B1-204ENST00000414963 CITED1Q99966 193 aa10.94□□□□□ -0.66
SF3B1-204ENST00000414963 ZFAND3Q9H8U3 227 aa10.94□□□□□ -0.66
SF3B1-204ENST00000414963 DNAJC4Q9NNZ3 241 aa10.94□□□□□ -0.66
SF3B1-204ENST00000414963 MRPL27Q9P0M9 148 aaKnown RBP10.94□□□□□ -0.66
SF3B1-204ENST00000414963 PUS1Q9Y606 427 aaKnown RBP eCLIP10.94□□□□□ -0.66
SF3B1-204ENST00000414963 FBN1P35555 2871 aaKnown RBP10.93□□□□□ -0.66
SF3B1-204ENST00000414963 IGHV4OR15-8A0A075B7B6 117 aa10.93□□□□□ -0.66
SF3B1-204ENST00000414963 A0A087WW49 117 aa10.93□□□□□ -0.66
SF3B1-204ENST00000414963 NUDT19A8MXV4 375 aa10.93□□□□□ -0.66
SF3B1-204ENST00000414963 HYPMO75409 117 aa10.93□□□□□ -0.66
SF3B1-204ENST00000414963 TMEM41BQ5BJD5 291 aa10.93□□□□□ -0.66
SF3B1-204ENST00000414963 AKR1C8PQ5T2L2 129 aa10.93□□□□□ -0.66
SF3B1-204ENST00000414963 PATE2Q6UY27 113 aa10.93□□□□□ -0.66
SF3B1-204ENST00000414963 DPPA3Q6W0C5 159 aa10.93□□□□□ -0.66
SF3B1-204ENST00000414963 OR1L4Q8NGR5 311 aa10.93□□□□□ -0.66
SF3B1-204ENST00000414963 GATAD1Q8WUU5 269 aa10.93□□□□□ -0.66
SF3B1-204ENST00000414963 RNF125Q96EQ8 232 aa10.93□□□□□ -0.66
SF3B1-204ENST00000414963 PFDN5Q99471 154 aa10.93□□□□□ -0.66
SF3B1-204ENST00000414963 RPRMQ9NS64 109 aa10.93□□□□□ -0.66
SF3B1-204ENST00000414963 TENM1Q9UKZ4 2725 aa10.93□□□□□ -0.66
SF3B1-204ENST00000414963 SEC14L6B5MCN3 397 aa10.92□□□□□ -0.66
SF3B1-204ENST00000414963 LINC01619G3V211 115 aa10.92□□□□□ -0.66
SF3B1-204ENST00000414963 LGALS9O00182 355 aa10.92□□□□□ -0.66
SF3B1-204ENST00000414963 IL4P05112 153 aa10.92□□□□□ -0.66
SF3B1-204ENST00000414963 ELLP55199 621 aaPredicted RBP10.92□□□□□ -0.66
SF3B1-204ENST00000414963 RAB2AP61019 212 aa10.92□□□□□ -0.66
SF3B1-204ENST00000414963 FHL3Q13643 280 aa10.92□□□□□ -0.66
SF3B1-204ENST00000414963 KLF5Q13887 457 aaPredicted RBP10.92□□□□□ -0.66
SF3B1-204ENST00000414963 FAM106AQ4KMX7 169 aa10.92□□□□□ -0.66
SF3B1-204ENST00000414963 GCSAMLQ5JQS6 135 aa10.92□□□□□ -0.66
SF3B1-204ENST00000414963 C8orf86Q6ZUL3 223 aa10.92□□□□□ -0.66
SF3B1-204ENST00000414963 ZNF767PQ75MW2 155 aa10.92□□□□□ -0.66
SF3B1-204ENST00000414963 RPP25LQ8N5L8 163 aaKnown RBP10.92□□□□□ -0.66
SF3B1-204ENST00000414963 OR11H1Q8NG94 326 aa10.92□□□□□ -0.66
SF3B1-204ENST00000414963 OR10G4Q8NGN3 311 aa10.92□□□□□ -0.66
SF3B1-204ENST00000414963 OR10G9Q8NGN4 311 aa10.92□□□□□ -0.66
SF3B1-204ENST00000414963 OR10G7Q8NGN6 311 aa10.92□□□□□ -0.66
SF3B1-204ENST00000414963 RNF141Q8WVD5 230 aa10.92□□□□□ -0.66
SF3B1-204ENST00000414963 TMEM37Q8WXS4 190 aa10.92□□□□□ -0.66
SF3B1-204ENST00000414963 TMEM190Q8WZ59 177 aa10.92□□□□□ -0.66
SF3B1-204ENST00000414963 DPF1Q92782 380 aa10.92□□□□□ -0.66
SF3B1-204ENST00000414963 RAX2Q96IS3 184 aa10.92□□□□□ -0.66
SF3B1-204ENST00000414963 RNF2Q99496 336 aa10.92□□□□□ -0.66
SF3B1-204ENST00000414963 ZNF747Q9BV97 191 aa10.92□□□□□ -0.66
SF3B1-204ENST00000414963 VSIRQ9H7M9 311 aa10.92□□□□□ -0.66
SF3B1-204ENST00000414963 IGHV3-35A0A0C4DH35 117 aa10.91□□□□□ -0.66
SF3B1-204ENST00000414963 K7EMT4 169 aa10.91□□□□□ -0.66
SF3B1-204ENST00000414963 CCL24O00175 119 aa10.91□□□□□ -0.66
SF3B1-204ENST00000414963 COX7A2P2O60397 106 aa10.91□□□□□ -0.66
SF3B1-204ENST00000414963 OR5G3P0C626 314 aa10.91□□□□□ -0.66
SF3B1-204ENST00000414963 ORM2P19652 201 aa10.91□□□□□ -0.66
SF3B1-204ENST00000414963 HOXD3P31249 432 aaPredicted RBP10.91□□□□□ -0.66
SF3B1-204ENST00000414963 LYZP61626 148 aa10.91□□□□□ -0.66
SF3B1-204ENST00000414963 USF2Q15853 346 aaPredicted RBP10.91□□□□□ -0.66
SF3B1-204ENST00000414963 RPEL1Q2QD12 228 aa10.91□□□□□ -0.66
SF3B1-204ENST00000414963 C10orf113Q5VZT2 155 aa10.91□□□□□ -0.66
SF3B1-204ENST00000414963 HIST2H2BDQ6DRA6 164 aa10.91□□□□□ -0.66
SF3B1-204ENST00000414963 REC114Q7Z4M0 266 aa10.91□□□□□ -0.66
SF3B1-204ENST00000414963 S100A7AQ86SG5 101 aa10.91□□□□□ -0.66
SF3B1-204ENST00000414963 OR1B1Q8NGR6 318 aa10.91□□□□□ -0.66
SF3B1-204ENST00000414963 RCC1LQ96I51 464 aaKnown RBP10.91□□□□□ -0.66
SF3B1-204ENST00000414963 UBQLN2Q9UHD9 624 aa10.91□□□□□ -0.66
SF3B1-204ENST00000414963 A0A1W2PRX2 142 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms