RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 ASAH2BP0C7U1 165 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 PPIBP23284 216 aaKnown RBP0.68□□□□□ -2.3
ATG4C-204ENST00000414558 CASP1P29466 404 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 HSPE1P61604 102 aaKnown RBP0.68□□□□□ -2.3
ATG4C-204ENST00000414558 RHOGP84095 191 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 DEFB115Q30KQ5 88 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 NUP210LQ5VU65 1888 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 FMN1Q68DA7 1419 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 LYG2Q86SG7 212 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 ALPK2Q86TB3 2170 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 LINC00311Q8N616 119 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 SELENOSQ9BQE4 189 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 ZNF106Q9H2Y7 1883 aaKnown RBP0.68□□□□□ -2.3
ATG4C-204ENST00000414558 YTHDC2Q9H6S0 1430 aaKnown RBP0.68□□□□□ -2.3
ATG4C-204ENST00000414558 PARVBQ9HBI1 364 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 ENY2Q9NPA8 101 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 OSTCQ9NRP0 149 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 C14orf105Q9NVL8 296 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 PYCARDQ9ULZ3 195 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 EPDR1Q9UM22 224 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 HS3ST2Q9Y278 367 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 MED12LQ86YW9 2145 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 SCN10AQ9Y5Y9 1956 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 MUC5BQ9HC84 5762 aaPredicted RBP0.68□□□□□ -2.3
ATG4C-204ENST00000414558 VIRMAQ69YN4 1812 aaKnown RBP0.68□□□□□ -2.3
ATG4C-204ENST00000414558 ARFGEF3Q5TH69 2177 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 MED1Q15648 1581 aaPredicted RBP0.67□□□□□ -2.3
ATG4C-204ENST00000414558 EXPH5Q8NEV8 1989 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 MIA2Q96PC5 1412 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 hCG_1818297A0A087WSY0 165 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 C7orf71A4D174 169 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 A8MT66 165 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 AIPO00170 330 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 HYPMO75409 117 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 UBL3O95164 117 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 OR4E1P0C645 316 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 ERP29P30040 261 aaKnown RBP0.67□□□□□ -2.3
ATG4C-204ENST00000414558 GNG10P50151 68 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 TCTAP57738 103 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 DEFA1P59665 94 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 RAB4BP61018 213 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 B2MP61769 119 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 DR1Q01658 176 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 SNCBQ16143 134 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 LYRM7Q5U5X0 104 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 TRIQKQ629K1 86 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 GOLT1AQ6ZVE7 132 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 S100A7AQ86SG5 101 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 OR11H6Q8NGC7 330 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 OR13D1Q8NGV5 346 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 OR13C6PQ8NH95 151 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 OR10J5Q8NHC4 309 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 FAM172AQ8WUF8 416 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 LINC00526Q96FQ7 95 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 MRPL57Q9BQC6 102 aaKnown RBP0.67□□□□□ -2.3
ATG4C-204ENST00000414558 TMEM70Q9BUB7 260 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 BOLA2Q9H3K6 86 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 CENPHQ9H3R5 247 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 UQCC1Q9NVA1 299 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 TVP23BQ9NYZ1 205 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 PIK3C2AO00443 1686 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 RP1P56715 2156 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 OBSL1O75147 1896 aa0.67□□□□□ -2.3
ATG4C-204ENST00000414558 ADGRB2O60241 1585 aa0.66□□□□□ -2.3
ATG4C-204ENST00000414558 CACNA1BQ00975 2339 aa0.66□□□□□ -2.3
ATG4C-204ENST00000414558 UHRF1BP1Q6BDS2 1440 aa0.66□□□□□ -2.3
ATG4C-204ENST00000414558 AHNAKQ09666 5890 aaKnown RBP0.66□□□□□ -2.3
ATG4C-204ENST00000414558 TRBV19A0A075B6N1 114 aa0.66□□□□□ -2.3
ATG4C-204ENST00000414558 A0A087X0T9 212 aa0.66□□□□□ -2.3
ATG4C-204ENST00000414558 TRAV1-1A0A0B4J248 108 aa0.66□□□□□ -2.3
ATG4C-204ENST00000414558 TRAV4A0A0B4J268 109 aa0.66□□□□□ -2.3
ATG4C-204ENST00000414558 A0A1B0GV72 72 aa0.66□□□□□ -2.3
ATG4C-204ENST00000414558 G3V2T6 193 aa0.66□□□□□ -2.3
ATG4C-204ENST00000414558 HMGB3O15347 200 aaKnown RBP0.66□□□□□ -2.3
ATG4C-204ENST00000414558 LYZL6O75951 148 aa0.66□□□□□ -2.3
ATG4C-204ENST00000414558 IFNA7P01567 189 aa0.66□□□□□ -2.3
ATG4C-204ENST00000414558 FABP1P07148 127 aa0.66□□□□□ -2.3
ATG4C-204ENST00000414558 G0S2P27469 103 aa0.66□□□□□ -2.3
ATG4C-204ENST00000414558 SERPINB1P30740 379 aa0.66□□□□□ -2.3
ATG4C-204ENST00000414558 SSR2P43308 183 aa0.66□□□□□ -2.3
ATG4C-204ENST00000414558 GNG3P63215 75 aa0.66□□□□□ -2.3
ATG4C-204ENST00000414558 TSNQ15631 228 aaKnown RBP0.66□□□□□ -2.3
ATG4C-204ENST00000414558 SMIM15Q7Z3B0 74 aa0.66□□□□□ -2.3
ATG4C-204ENST00000414558 FAM19A2Q8N3H0 131 aa0.66□□□□□ -2.3
ATG4C-204ENST00000414558 OR52R1Q8NGF1 315 aa0.66□□□□□ -2.3
ATG4C-204ENST00000414558 NEK7Q8TDX7 302 aa0.66□□□□□ -2.3
ATG4C-204ENST00000414558 ZHX1-C8orf76Q96EF9 292 aa0.66□□□□□ -2.3
ATG4C-204ENST00000414558 GINS3Q9BRX5 216 aa0.66□□□□□ -2.3
ATG4C-204ENST00000414558 IMUPQ9GZP8 106 aa0.66□□□□□ -2.3
ATG4C-204ENST00000414558 RNASE7Q9H1E1 156 aaKnown RBP0.66□□□□□ -2.3
ATG4C-204ENST00000414558 SH3BGRL3Q9H299 93 aa0.66□□□□□ -2.3
ATG4C-204ENST00000414558 BIN3Q9NQY0 253 aa0.66□□□□□ -2.3
ATG4C-204ENST00000414558 LYRM2Q9NU23 88 aaPredicted RBP0.66□□□□□ -2.3
ATG4C-204ENST00000414558 GID8Q9NWU2 228 aa0.66□□□□□ -2.3
ATG4C-204ENST00000414558 CAMSAP2Q08AD1 1489 aa0.66□□□□□ -2.3
ATG4C-204ENST00000414558 POLEQ07864 2286 aa0.66□□□□□ -2.3
ATG4C-204ENST00000414558 DIDO1Q9BTC0 2240 aaKnown RBP0.65□□□□□ -2.3
ATG4C-204ENST00000414558 TRPM1Q7Z4N2 1603 aa0.65□□□□□ -2.31
ATG4C-204ENST00000414558 TRAV12-1A0A0B4J245 112 aa0.65□□□□□ -2.31
ATG4C-204ENST00000414558 PPP5D1E7EU14 171 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms