RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 GRAMD2BQ96HH9 432 aa10.96□□□□□ -0.65
LIMS4-201ENST00000413601 OVOL2Q9BRP0 275 aa10.96□□□□□ -0.65
LIMS4-201ENST00000413601 NUDT15Q9NV35 164 aa10.96□□□□□ -0.65
LIMS4-201ENST00000413601 AGRNO00468 2067 aa10.96□□□□□ -0.66
LIMS4-201ENST00000413601 NKX2-1P43699 371 aaPredicted RBP10.95□□□□□ -0.66
LIMS4-201ENST00000413601 CASC10Q5T4H9 136 aa10.95□□□□□ -0.66
LIMS4-201ENST00000413601 C16orf54Q6UWD8 224 aa10.95□□□□□ -0.66
LIMS4-201ENST00000413601 OR51G1Q8NGK1 321 aa10.95□□□□□ -0.66
LIMS4-201ENST00000413601 STRAPQ9Y3F4 350 aaKnown RBP10.95□□□□□ -0.66
LIMS4-201ENST00000413601 TRAV2A0A0B4J234 112 aa10.94□□□□□ -0.66
LIMS4-201ENST00000413601 PRSS46E5RG02 174 aa10.94□□□□□ -0.66
LIMS4-201ENST00000413601 K7EQG2 157 aa10.94□□□□□ -0.66
LIMS4-201ENST00000413601 SSSCA1O60232 199 aa10.94□□□□□ -0.66
LIMS4-201ENST00000413601 DEFB131AP59861 70 aa10.94□□□□□ -0.66
LIMS4-201ENST00000413601 IAH1Q2TAA2 248 aaPredicted RBP10.94□□□□□ -0.66
LIMS4-201ENST00000413601 ZFAND6Q6FIF0 208 aa10.94□□□□□ -0.66
LIMS4-201ENST00000413601 GLMPQ8WWB7 406 aa10.94□□□□□ -0.66
LIMS4-201ENST00000413601 RNF125Q96EQ8 232 aa10.94□□□□□ -0.66
LIMS4-201ENST00000413601 SEC22CQ9BRL7 303 aa10.94□□□□□ -0.66
LIMS4-201ENST00000413601 PBDC1Q9BVG4 233 aa10.94□□□□□ -0.66
LIMS4-201ENST00000413601 GSKIPQ9P0R6 139 aa10.94□□□□□ -0.66
LIMS4-201ENST00000413601 TBC1D24Q9ULP9 559 aa10.94□□□□□ -0.66
LIMS4-201ENST00000413601 IGKV1OR2-108A0A075B7D4 117 aa10.93□□□□□ -0.66
LIMS4-201ENST00000413601 KIR2DL5BA0A0G2JN68 375 aa10.93□□□□□ -0.66
LIMS4-201ENST00000413601 KIR2DL5BA0A0G2JPC4 375 aa10.93□□□□□ -0.66
LIMS4-201ENST00000413601 UBE2CO00762 179 aa10.93□□□□□ -0.66
LIMS4-201ENST00000413601 SCGB1D2O95969 90 aa10.93□□□□□ -0.66
LIMS4-201ENST00000413601 H2AFB2P0C5Z0 115 aa10.93□□□□□ -0.66
LIMS4-201ENST00000413601 OR2F1Q13607 317 aa10.93□□□□□ -0.66
LIMS4-201ENST00000413601 DEFB135Q30KP9 77 aa10.93□□□□□ -0.66
LIMS4-201ENST00000413601 LEMD1Q68G75 181 aa10.93□□□□□ -0.66
LIMS4-201ENST00000413601 KIR2DL5AQ8N109 375 aa10.93□□□□□ -0.66
LIMS4-201ENST00000413601 STPG3Q8N7X2 389 aa10.93□□□□□ -0.66
LIMS4-201ENST00000413601 ZBTB8BQ8NAP8 495 aaPredicted RBP10.93□□□□□ -0.66
LIMS4-201ENST00000413601 KIR2DL5BQ8NHK3 375 aa10.93□□□□□ -0.66
LIMS4-201ENST00000413601 PSENENQ9NZ42 101 aa10.93□□□□□ -0.66
LIMS4-201ENST00000413601 FAM240BA0A1B0GVZ2 78 aa10.92□□□□□ -0.66
LIMS4-201ENST00000413601 HELTA6NFD8 242 aa10.92□□□□□ -0.66
LIMS4-201ENST00000413601 CCSO14618 274 aa10.92□□□□□ -0.66
LIMS4-201ENST00000413601 BUB3O43684 328 aa10.92□□□□□ -0.66
LIMS4-201ENST00000413601 FABP1P07148 127 aa10.92□□□□□ -0.66
LIMS4-201ENST00000413601 EIF2B2P49770 351 aaKnown RBP10.92□□□□□ -0.66
LIMS4-201ENST00000413601 PAX9P55771 341 aa10.92□□□□□ -0.66
LIMS4-201ENST00000413601 LYZP61626 148 aa10.92□□□□□ -0.66
LIMS4-201ENST00000413601 MZT2BQ6NZ67 158 aa10.92□□□□□ -0.66
LIMS4-201ENST00000413601 Q6ZWC4 215 aa10.92□□□□□ -0.66
LIMS4-201ENST00000413601 THAP8Q8NA92 274 aa10.92□□□□□ -0.66
LIMS4-201ENST00000413601 DCANP1Q8TF63 244 aa10.92□□□□□ -0.66
LIMS4-201ENST00000413601 SMIM8Q96KF7 97 aa10.92□□□□□ -0.66
LIMS4-201ENST00000413601 TRGV9Q99603 122 aa10.92□□□□□ -0.66
LIMS4-201ENST00000413601 PTTG2Q9NZH5 202 aa10.92□□□□□ -0.66
LIMS4-201ENST00000413601 SNRPGP15A8MWD9 76 aa10.91□□□□□ -0.66
LIMS4-201ENST00000413601 SPRY2O43597 315 aa10.91□□□□□ -0.66
LIMS4-201ENST00000413601 ZNF688P0C7X2 276 aa10.91□□□□□ -0.66
LIMS4-201ENST00000413601 AP2S1P53680 142 aaPredicted RBP10.91□□□□□ -0.66
LIMS4-201ENST00000413601 ASAH1Q13510 395 aa10.91□□□□□ -0.66
LIMS4-201ENST00000413601 ZNF846Q147U1 533 aa10.91□□□□□ -0.66
LIMS4-201ENST00000413601 OR8G2PQ6IF36 304 aa10.91□□□□□ -0.66
LIMS4-201ENST00000413601 ACOT7LQ6ZUV0 252 aa10.91□□□□□ -0.66
LIMS4-201ENST00000413601 ZNF431Q8TF32 576 aaPredicted RBP10.91□□□□□ -0.66
LIMS4-201ENST00000413601 WDR12Q9GZL7 423 aaKnown RBP10.91□□□□□ -0.66
LIMS4-201ENST00000413601 PMS2P5A8MQ11 134 aa10.9□□□□□ -0.66
LIMS4-201ENST00000413601 FAM25EA8MYX2 175 aa10.9□□□□□ -0.66
LIMS4-201ENST00000413601 UPK1BO75841 260 aa10.9□□□□□ -0.66
LIMS4-201ENST00000413601 CCNKO75909 580 aa10.9□□□□□ -0.66
LIMS4-201ENST00000413601 MBPP02686 304 aaPredicted RBP10.9□□□□□ -0.66
LIMS4-201ENST00000413601 AKR1C1Q04828 323 aa10.9□□□□□ -0.66
LIMS4-201ENST00000413601 SIGLEC15Q6ZMC9 328 aa10.9□□□□□ -0.66
LIMS4-201ENST00000413601 RNF183Q96D59 192 aa10.9□□□□□ -0.66
LIMS4-201ENST00000413601 RAB40CQ96S21 281 aa10.9□□□□□ -0.66
LIMS4-201ENST00000413601 CSTL1Q9H114 145 aa10.9□□□□□ -0.66
LIMS4-201ENST00000413601 TP53TG1Q9Y2A0 90 aa10.9□□□□□ -0.66
LIMS4-201ENST00000413601 RCL1Q9Y2P8 373 aaKnown RBP10.9□□□□□ -0.66
LIMS4-201ENST00000413601 METTL15P1P0C7V9 234 aa10.89□□□□□ -0.67
LIMS4-201ENST00000413601 IFITM3Q01628 133 aa10.89□□□□□ -0.67
LIMS4-201ENST00000413601 C12orf45Q8N5I9 185 aaPredicted RBP10.89□□□□□ -0.67
LIMS4-201ENST00000413601 NRN1Q9NPD7 142 aa10.89□□□□□ -0.67
LIMS4-201ENST00000413601 PFDN2Q9UHV9 154 aa10.89□□□□□ -0.67
LIMS4-201ENST00000413601 SMCO3A2RU48 225 aa10.88□□□□□ -0.67
LIMS4-201ENST00000413601 C5orf51A6NDU8 294 aa10.88□□□□□ -0.67
LIMS4-201ENST00000413601 KNCNA6PVL3 124 aa10.88□□□□□ -0.67
LIMS4-201ENST00000413601 GATA2P23769 480 aaPredicted RBP10.88□□□□□ -0.67
LIMS4-201ENST00000413601 NUP62P37198 522 aaPredicted RBP10.88□□□□□ -0.67
LIMS4-201ENST00000413601 RRAS2P62070 204 aaPredicted RBP10.88□□□□□ -0.67
LIMS4-201ENST00000413601 TMEM14EPQ6UXP3 125 aa10.88□□□□□ -0.67
LIMS4-201ENST00000413601 TMEM182Q6ZP80 229 aaPredicted RBP10.88□□□□□ -0.67
LIMS4-201ENST00000413601 TMEM144Q7Z5S9 345 aa10.88□□□□□ -0.67
LIMS4-201ENST00000413601 STHQ8IWL8 128 aa10.88□□□□□ -0.67
LIMS4-201ENST00000413601 PPP1R14BQ96C90 147 aa10.88□□□□□ -0.67
LIMS4-201ENST00000413601 A0A0J9YWU9 116 aa10.87□□□□□ -0.67
LIMS4-201ENST00000413601 C7orf66A4D0T2 115 aa10.87□□□□□ -0.67
LIMS4-201ENST00000413601 TSC22D2O75157 780 aa10.87□□□□□ -0.67
LIMS4-201ENST00000413601 TAS2R30P59541 319 aa10.87□□□□□ -0.67
LIMS4-201ENST00000413601 PSMG4Q5JS54 123 aa10.87□□□□□ -0.67
LIMS4-201ENST00000413601 ENKURQ8TC29 256 aa10.87□□□□□ -0.67
LIMS4-201ENST00000413601 BATF3Q9NR55 127 aa10.87□□□□□ -0.67
LIMS4-201ENST00000413601 LSM5Q9Y4Y9 91 aaKnown RBP10.87□□□□□ -0.67
LIMS4-201ENST00000413601 DNAH7Q8WXX0 4024 aa10.87□□□□□ -0.67
LIMS4-201ENST00000413601 KMT2CQ8NEZ4 4911 aaKnown RBP10.86□□□□□ -0.67
LIMS4-201ENST00000413601 CFDP00746 253 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms