RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 CIB3Q96Q77 187 aaPredicted RBP12.81□□□□□ -0.36
HSPG2-204ENST00000412328 TMEM231Q9H6L2 316 aa12.81□□□□□ -0.36
HSPG2-204ENST00000412328 RCL1Q9Y2P8 373 aaKnown RBP12.81□□□□□ -0.36
HSPG2-204ENST00000412328 DNAH1Q9P2D7 4330 aa12.8□□□□□ -0.36
HSPG2-204ENST00000412328 A0A1W2PS18 150 aa12.8□□□□□ -0.36
HSPG2-204ENST00000412328 H3BP45 60 aa12.8□□□□□ -0.36
HSPG2-204ENST00000412328 WRBO00258 174 aa12.8□□□□□ -0.36
HSPG2-204ENST00000412328 BUB3O43684 328 aa12.8□□□□□ -0.36
HSPG2-204ENST00000412328 PAX9P55771 341 aa12.8□□□□□ -0.36
HSPG2-204ENST00000412328 POLR2GP62487 172 aaKnown RBP eCLIP12.8□□□□□ -0.36
HSPG2-204ENST00000412328 RNF125Q96EQ8 232 aa12.8□□□□□ -0.36
HSPG2-204ENST00000412328 SLC35E1Q96K37 410 aa12.8□□□□□ -0.36
HSPG2-204ENST00000412328 NUDT15Q9NV35 164 aa12.8□□□□□ -0.36
HSPG2-204ENST00000412328 PTTG2Q9NZH5 202 aa12.8□□□□□ -0.36
HSPG2-204ENST00000412328 RD3LP0DJH9 198 aa12.79□□□□□ -0.36
HSPG2-204ENST00000412328 Q6ZWC4 215 aa12.79□□□□□ -0.36
HSPG2-204ENST00000412328 OR51G1Q8NGK1 321 aa12.79□□□□□ -0.36
HSPG2-204ENST00000412328 GRAMD2BQ96HH9 432 aa12.79□□□□□ -0.36
HSPG2-204ENST00000412328 TP53TG1Q9Y2A0 90 aa12.79□□□□□ -0.36
HSPG2-204ENST00000412328 RPL35AP18077 110 aaKnown RBP12.78□□□□□ -0.36
HSPG2-204ENST00000412328 NKX2-1P43699 371 aaPredicted RBP12.78□□□□□ -0.36
HSPG2-204ENST00000412328 APOC4P55056 127 aa12.78□□□□□ -0.36
HSPG2-204ENST00000412328 RAB11AP62491 216 aa12.78□□□□□ -0.36
HSPG2-204ENST00000412328 IFITM3Q01628 133 aa12.78□□□□□ -0.36
HSPG2-204ENST00000412328 ASAH1Q13510 395 aa12.78□□□□□ -0.36
HSPG2-204ENST00000412328 DEFB135Q30KP9 77 aa12.78□□□□□ -0.36
HSPG2-204ENST00000412328 ZBTB8BQ8NAP8 495 aaPredicted RBP12.78□□□□□ -0.36
HSPG2-204ENST00000412328 S100ZQ8WXG8 99 aa12.78□□□□□ -0.36
HSPG2-204ENST00000412328 TRGV9Q99603 122 aa12.78□□□□□ -0.36
HSPG2-204ENST00000412328 SEC22CQ9BRL7 303 aa12.78□□□□□ -0.36
HSPG2-204ENST00000412328 TRAV6A0A075B6T7 132 aa12.77□□□□□ -0.37
HSPG2-204ENST00000412328 SSSCA1O60232 199 aa12.77□□□□□ -0.37
HSPG2-204ENST00000412328 CCNKO75909 580 aa12.77□□□□□ -0.37
HSPG2-204ENST00000412328 DEFB131AP59861 70 aa12.77□□□□□ -0.37
HSPG2-204ENST00000412328 PAFAH1B2P68402 229 aa12.77□□□□□ -0.37
HSPG2-204ENST00000412328 SPANXN5Q5MJ07 72 aa12.77□□□□□ -0.37
HSPG2-204ENST00000412328 OR8G2PQ6IF36 304 aa12.77□□□□□ -0.37
HSPG2-204ENST00000412328 TMEM14EPQ6UXP3 125 aa12.77□□□□□ -0.37
HSPG2-204ENST00000412328 ACOT7LQ6ZUV0 252 aa12.77□□□□□ -0.37
HSPG2-204ENST00000412328 STXBP6Q8NFX7 210 aa12.77□□□□□ -0.37
HSPG2-204ENST00000412328 RNF183Q96D59 192 aa12.77□□□□□ -0.37
HSPG2-204ENST00000412328 ZFP92A6NM28 416 aa12.76□□□□□ -0.37
HSPG2-204ENST00000412328 UBE2CO00762 179 aa12.76□□□□□ -0.37
HSPG2-204ENST00000412328 CCSO14618 274 aa12.76□□□□□ -0.37
HSPG2-204ENST00000412328 LYL1P12980 280 aa12.76□□□□□ -0.37
HSPG2-204ENST00000412328 EIF2B2P49770 351 aaKnown RBP12.76□□□□□ -0.37
HSPG2-204ENST00000412328 CMC4P56277 68 aaPredicted RBP12.76□□□□□ -0.37
HSPG2-204ENST00000412328 EWSR1Q01844 656 aaKnown RBP eCLIP12.76□□□□□ -0.37
HSPG2-204ENST00000412328 IAH1Q2TAA2 248 aaPredicted RBP12.76□□□□□ -0.37
HSPG2-204ENST00000412328 LEMD1Q68G75 181 aa12.76□□□□□ -0.37
HSPG2-204ENST00000412328 SMIM8Q96KF7 97 aa12.76□□□□□ -0.37
HSPG2-204ENST00000412328 C11orf1Q9H5F2 150 aa12.76□□□□□ -0.37
HSPG2-204ENST00000412328 RABAC1Q9UI14 185 aa12.76□□□□□ -0.37
HSPG2-204ENST00000412328 IFNA21P01568 189 aa12.75□□□□□ -0.37
HSPG2-204ENST00000412328 ZFAND6Q6FIF0 208 aa12.75□□□□□ -0.37
HSPG2-204ENST00000412328 TMEM182Q6ZP80 229 aaPredicted RBP12.75□□□□□ -0.37
HSPG2-204ENST00000412328 TRPT1Q86TN4 253 aaKnown RBP12.75□□□□□ -0.37
HSPG2-204ENST00000412328 ZNF431Q8TF32 576 aaPredicted RBP12.75□□□□□ -0.37
HSPG2-204ENST00000412328 NARS2Q96I59 477 aaKnown RBP12.75□□□□□ -0.37
HSPG2-204ENST00000412328 STRAPQ9Y3F4 350 aaKnown RBP12.75□□□□□ -0.37
HSPG2-204ENST00000412328 HELTA6NFD8 242 aa12.74□□□□□ -0.37
HSPG2-204ENST00000412328 DNASE2O00115 360 aaPredicted RBP12.74□□□□□ -0.37
HSPG2-204ENST00000412328 SOCS3O14543 225 aa12.74□□□□□ -0.37
HSPG2-204ENST00000412328 UPK1BO75841 260 aa12.74□□□□□ -0.37
HSPG2-204ENST00000412328 MBPP02686 304 aaPredicted RBP12.74□□□□□ -0.37
HSPG2-204ENST00000412328 GIG44P09565 113 aaPredicted RBP12.74□□□□□ -0.37
HSPG2-204ENST00000412328 ZNF688P0C7X2 276 aa12.74□□□□□ -0.37
HSPG2-204ENST00000412328 RPL11P62913 178 aaKnown RBP12.74□□□□□ -0.37
HSPG2-204ENST00000412328 RPP30P78346 268 aaKnown RBP12.74□□□□□ -0.37
HSPG2-204ENST00000412328 SIGLEC15Q6ZMC9 328 aa12.74□□□□□ -0.37
HSPG2-204ENST00000412328 C17orf77Q96MU5 243 aa12.74□□□□□ -0.37
HSPG2-204ENST00000412328 WDR12Q9GZL7 423 aaKnown RBP12.74□□□□□ -0.37
HSPG2-204ENST00000412328 PSENENQ9NZ42 101 aa12.74□□□□□ -0.37
HSPG2-204ENST00000412328 PAIP2BQ9ULR5 123 aaKnown RBP12.74□□□□□ -0.37
HSPG2-204ENST00000412328 SPRY2O43597 315 aa12.73□□□□□ -0.37
HSPG2-204ENST00000412328 TSC22D2O75157 780 aa12.73□□□□□ -0.37
HSPG2-204ENST00000412328 IL15RAQ13261 267 aa12.73□□□□□ -0.37
HSPG2-204ENST00000412328 OR2F1Q13607 317 aa12.73□□□□□ -0.37
HSPG2-204ENST00000412328 PBDC1Q9BVG4 233 aa12.73□□□□□ -0.37
HSPG2-204ENST00000412328 NRN1Q9NPD7 142 aa12.73□□□□□ -0.37
HSPG2-204ENST00000412328 C7orf66A4D0T2 115 aa12.72□□□□□ -0.37
HSPG2-204ENST00000412328 SCGB1D2O95969 90 aa12.72□□□□□ -0.37
HSPG2-204ENST00000412328 H2AFB2P0C5Z0 115 aa12.72□□□□□ -0.37
HSPG2-204ENST00000412328 C4BPBP20851 252 aa12.72□□□□□ -0.37
HSPG2-204ENST00000412328 NUP62P37198 522 aaPredicted RBP12.72□□□□□ -0.37
HSPG2-204ENST00000412328 TAS2R30P59541 319 aa12.72□□□□□ -0.37
HSPG2-204ENST00000412328 LYZP61626 148 aa12.72□□□□□ -0.37
HSPG2-204ENST00000412328 ARL16Q0P5N6 197 aa12.72□□□□□ -0.37
HSPG2-204ENST00000412328 TMEM144Q7Z5S9 345 aa12.72□□□□□ -0.37
HSPG2-204ENST00000412328 RAB40CQ96S21 281 aa12.72□□□□□ -0.37
HSPG2-204ENST00000412328 CSTL1Q9H114 145 aa12.72□□□□□ -0.37
HSPG2-204ENST00000412328 SEPSECSQ9HD40 501 aaKnown RBP12.72□□□□□ -0.37
HSPG2-204ENST00000412328 A0A0J9YWU9 116 aa12.71□□□□□ -0.37
HSPG2-204ENST00000412328 METTL15P1P0C7V9 234 aa12.71□□□□□ -0.37
HSPG2-204ENST00000412328 GATA2P23769 480 aaPredicted RBP12.71□□□□□ -0.37
HSPG2-204ENST00000412328 AP2S1P53680 142 aaPredicted RBP12.71□□□□□ -0.37
HSPG2-204ENST00000412328 DLK1P80370 383 aa12.71□□□□□ -0.37
HSPG2-204ENST00000412328 ZNF846Q147U1 533 aa12.71□□□□□ -0.37
HSPG2-204ENST00000412328 SLC45A2Q9UMX9 530 aa12.71□□□□□ -0.37
HSPG2-204ENST00000412328 FAM240BA0A1B0GVZ2 78 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms