RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 SLC35E1Q96K37 410 aa8.48□□□□□ -1.05
LINC00963-201ENST00000412141 CLEC5AQ9NY25 188 aa8.48□□□□□ -1.05
LINC00963-201ENST00000412141 CACFD1Q9UGQ2 172 aa8.48□□□□□ -1.05
LINC00963-201ENST00000412141 U3KQE9 123 aa8.48□□□□□ -1.05
LINC00963-201ENST00000412141 FRAS1Q86XX4 4008 aa8.47□□□□□ -1.05
LINC00963-201ENST00000412141 WRBO00258 174 aa8.47□□□□□ -1.05
LINC00963-201ENST00000412141 INPP1P49441 399 aa8.47□□□□□ -1.05
LINC00963-201ENST00000412141 GAMTQ14353 236 aa8.47□□□□□ -1.05
LINC00963-201ENST00000412141 SPANXN2Q5MJ10 180 aa8.47□□□□□ -1.05
LINC00963-201ENST00000412141 LINC00476Q8WZB0 136 aa8.47□□□□□ -1.05
LINC00963-201ENST00000412141 SLC25A21Q9BQT8 299 aaPredicted RBP8.47□□□□□ -1.05
LINC00963-201ENST00000412141 KLK5Q9Y337 293 aaPredicted RBP8.47□□□□□ -1.05
LINC00963-201ENST00000412141 SFT2D2O95562 160 aa8.46□□□□□ -1.06
LINC00963-201ENST00000412141 GIG44P09565 113 aaPredicted RBP8.46□□□□□ -1.06
LINC00963-201ENST00000412141 C4BPBP20851 252 aa8.46□□□□□ -1.06
LINC00963-201ENST00000412141 AP2S1P53680 142 aaPredicted RBP8.46□□□□□ -1.06
LINC00963-201ENST00000412141 DEFB1P60022 68 aa8.46□□□□□ -1.06
LINC00963-201ENST00000412141 LYZP61626 148 aa8.46□□□□□ -1.06
LINC00963-201ENST00000412141 RAB11AP62491 216 aa8.46□□□□□ -1.06
LINC00963-201ENST00000412141 SIGLEC15Q6ZMC9 328 aa8.46□□□□□ -1.06
LINC00963-201ENST00000412141 TRPT1Q86TN4 253 aaKnown RBP8.46□□□□□ -1.06
LINC00963-201ENST00000412141 CENPSQ8N2Z9 138 aa8.46□□□□□ -1.06
LINC00963-201ENST00000412141 C11orf45Q8TAV5 145 aa8.46□□□□□ -1.06
LINC00963-201ENST00000412141 PPP1R14BQ96C90 147 aa8.46□□□□□ -1.06
LINC00963-201ENST00000412141 RNF125Q96EQ8 232 aa8.46□□□□□ -1.06
LINC00963-201ENST00000412141 RAB40CQ96S21 281 aa8.46□□□□□ -1.06
LINC00963-201ENST00000412141 RBM38Q9H0Z9 239 aaKnown RBP8.46□□□□□ -1.06
LINC00963-201ENST00000412141 FLVCR2Q9UPI3 526 aa8.46□□□□□ -1.06
LINC00963-201ENST00000412141 IGKV1D-37A0A075B6S9 117 aa8.45□□□□□ -1.06
LINC00963-201ENST00000412141 FAM90A26D6RGX4 464 aa8.45□□□□□ -1.06
LINC00963-201ENST00000412141 H3BP45 60 aa8.45□□□□□ -1.06
LINC00963-201ENST00000412141 BUB3O43684 328 aa8.45□□□□□ -1.06
LINC00963-201ENST00000412141 PITX3O75364 302 aa8.45□□□□□ -1.06
LINC00963-201ENST00000412141 ADAP1O75689 374 aa8.45□□□□□ -1.06
LINC00963-201ENST00000412141 IGKV3-20P01619 116 aa8.45□□□□□ -1.06
LINC00963-201ENST00000412141 GPX4P36969 197 aaPredicted RBP8.45□□□□□ -1.06
LINC00963-201ENST00000412141 BAK1Q16611 211 aa8.45□□□□□ -1.06
LINC00963-201ENST00000412141 GGNBP1Q5YKI7 109 aa8.45□□□□□ -1.06
LINC00963-201ENST00000412141 TRIQKQ629K1 86 aa8.45□□□□□ -1.06
LINC00963-201ENST00000412141 LINC00052Q96N35 136 aa8.45□□□□□ -1.06
LINC00963-201ENST00000412141 SRRQ9GZT4 340 aa8.45□□□□□ -1.06
LINC00963-201ENST00000412141 NRN1Q9NPD7 142 aa8.45□□□□□ -1.06
LINC00963-201ENST00000412141 IGHV4-28A0A0C4DH34 117 aa8.44□□□□□ -1.06
LINC00963-201ENST00000412141 DUXBA0A1W2PPF3 345 aa8.44□□□□□ -1.06
LINC00963-201ENST00000412141 SNRPD3P62318 126 aaKnown RBP8.44□□□□□ -1.06
LINC00963-201ENST00000412141 SPANXN5Q5MJ07 72 aa8.44□□□□□ -1.06
LINC00963-201ENST00000412141 LRTM2Q8N967 370 aa8.44□□□□□ -1.06
LINC00963-201ENST00000412141 XCL2Q9UBD3 114 aa8.44□□□□□ -1.06
LINC00963-201ENST00000412141 TMED3Q9Y3Q3 217 aa8.44□□□□□ -1.06
LINC00963-201ENST00000412141 PIGBOS1A0A0B4J2F0 54 aa8.43□□□□□ -1.06
LINC00963-201ENST00000412141 SNRPGP15A8MWD9 76 aa8.43□□□□□ -1.06
LINC00963-201ENST00000412141 SYNGR2O43760 224 aa8.43□□□□□ -1.06
LINC00963-201ENST00000412141 MED6O75586 246 aa8.43□□□□□ -1.06
LINC00963-201ENST00000412141 RBMY1A1P0DJD3 496 aaKnown RBP8.43□□□□□ -1.06
LINC00963-201ENST00000412141 RBMY1CP0DJD4 496 aa8.43□□□□□ -1.06
LINC00963-201ENST00000412141 SPP1P10451 314 aa8.43□□□□□ -1.06
LINC00963-201ENST00000412141 ATF4P18848 351 aaPredicted RBP8.43□□□□□ -1.06
LINC00963-201ENST00000412141 ATP5IP56385 69 aaPredicted RBP8.43□□□□□ -1.06
LINC00963-201ENST00000412141 FXYD7P58549 80 aa8.43□□□□□ -1.06
LINC00963-201ENST00000412141 RBMY1FQ15415 496 aaKnown RBP8.43□□□□□ -1.06
LINC00963-201ENST00000412141 WDR12Q9GZL7 423 aaKnown RBP8.43□□□□□ -1.06
LINC00963-201ENST00000412141 C11orf68Q9H3H3 251 aaKnown RBP8.43□□□□□ -1.06
LINC00963-201ENST00000412141 PFDN2Q9UHV9 154 aa8.43□□□□□ -1.06
LINC00963-201ENST00000412141 DNAH10Q8IVF4 4471 aa8.43□□□□□ -1.06
LINC00963-201ENST00000412141 IGKV1OR2-108A0A075B7D4 117 aa8.42□□□□□ -1.06
LINC00963-201ENST00000412141 C9orf170A2RU37 121 aa8.42□□□□□ -1.06
LINC00963-201ENST00000412141 SMCO3A2RU48 225 aa8.42□□□□□ -1.06
LINC00963-201ENST00000412141 DEDDO75618 318 aa8.42□□□□□ -1.06
LINC00963-201ENST00000412141 FABP1P07148 127 aa8.42□□□□□ -1.06
LINC00963-201ENST00000412141 SLC25A6P12236 298 aa8.42□□□□□ -1.06
LINC00963-201ENST00000412141 ANXA7P20073 488 aaKnown RBP8.42□□□□□ -1.06
LINC00963-201ENST00000412141 GATA2P23769 480 aaPredicted RBP8.42□□□□□ -1.06
LINC00963-201ENST00000412141 POLR2GP62487 172 aaKnown RBP eCLIP8.42□□□□□ -1.06
LINC00963-201ENST00000412141 GDF5OSQ5U4N7 250 aa8.42□□□□□ -1.06
LINC00963-201ENST00000412141 OR8G2PQ6IF36 304 aa8.42□□□□□ -1.06
LINC00963-201ENST00000412141 MORN3Q6PF18 240 aaPredicted RBP8.42□□□□□ -1.06
LINC00963-201ENST00000412141 OR8I2Q8N0Y5 310 aa8.42□□□□□ -1.06
LINC00963-201ENST00000412141 Q8NAQ8 132 aa8.42□□□□□ -1.06
LINC00963-201ENST00000412141 CIB3Q96Q77 187 aaPredicted RBP8.42□□□□□ -1.06
LINC00963-201ENST00000412141 MFFQ9GZY8 342 aa8.42□□□□□ -1.06
LINC00963-201ENST00000412141 SLC25A22Q9H936 323 aa8.42□□□□□ -1.06
LINC00963-201ENST00000412141 TBC1D24Q9ULP9 559 aa8.42□□□□□ -1.06
LINC00963-201ENST00000412141 KMT2AQ03164 3969 aa8.42□□□□□ -1.06
LINC00963-201ENST00000412141 IGHV3OR16-12A0A075B7B8 117 aa8.41□□□□□ -1.06
LINC00963-201ENST00000412141 H3BMM0 161 aa8.41□□□□□ -1.06
LINC00963-201ENST00000412141 NDUFB6O95139 128 aa8.41□□□□□ -1.06
LINC00963-201ENST00000412141 SCGB1D2O95969 90 aa8.41□□□□□ -1.06
LINC00963-201ENST00000412141 ORM2P19652 201 aa8.41□□□□□ -1.06
LINC00963-201ENST00000412141 HLA-DMBP28068 263 aa8.41□□□□□ -1.06
LINC00963-201ENST00000412141 RPP30P78346 268 aaKnown RBP8.41□□□□□ -1.06
LINC00963-201ENST00000412141 AKR1C1Q04828 323 aa8.41□□□□□ -1.06
LINC00963-201ENST00000412141 C4orf46Q504U0 113 aa8.41□□□□□ -1.06
LINC00963-201ENST00000412141 TMEM182Q6ZP80 229 aaPredicted RBP8.41□□□□□ -1.06
LINC00963-201ENST00000412141 ZNF767PQ75MW2 155 aa8.41□□□□□ -1.06
LINC00963-201ENST00000412141 RPP25LQ8N5L8 163 aaKnown RBP8.41□□□□□ -1.06
LINC00963-201ENST00000412141 COQ8AQ8NI60 647 aa8.41□□□□□ -1.06
LINC00963-201ENST00000412141 TRGV9Q99603 122 aa8.41□□□□□ -1.06
LINC00963-201ENST00000412141 SDHCQ99643 169 aaPredicted RBP8.41□□□□□ -1.06
LINC00963-201ENST00000412141 STRAPQ9Y3F4 350 aaKnown RBP8.41□□□□□ -1.06
LINC00963-201ENST00000412141 X6R8D5 127 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms