RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 Q6ZRG5 221 aa14.36□□□□□ -0.11
CDC42-204ENST00000411827 STOML3Q8TAV4 291 aa14.36□□□□□ -0.11
CDC42-204ENST00000411827 CHRDL1Q9BU40 450 aa14.36□□□□□ -0.11
CDC42-204ENST00000411827 ZNF471Q9BX82 626 aaPredicted RBP14.36□□□□□ -0.11
CDC42-204ENST00000411827 ARV1Q9H2C2 271 aa14.36□□□□□ -0.11
CDC42-204ENST00000411827 SLC45A2Q9UMX9 530 aa14.36□□□□□ -0.11
CDC42-204ENST00000411827 LGALS9O00182 355 aa14.35□□□□□ -0.11
CDC42-204ENST00000411827 ELLP55199 621 aaPredicted RBP14.35□□□□□ -0.11
CDC42-204ENST00000411827 RPL7L1Q6DKI1 246 aaKnown RBP14.35□□□□□ -0.11
CDC42-204ENST00000411827 LAMTOR1Q6IAA8 161 aa14.35□□□□□ -0.11
CDC42-204ENST00000411827 C8orf86Q6ZUL3 223 aa14.35□□□□□ -0.11
CDC42-204ENST00000411827 C1QL4Q86Z23 238 aa14.35□□□□□ -0.11
CDC42-204ENST00000411827 MGST2Q99735 147 aa14.35□□□□□ -0.11
CDC42-204ENST00000411827 GINS3Q9BRX5 216 aa14.35□□□□□ -0.11
CDC42-204ENST00000411827 GGTLC1Q9BX51 225 aa14.35□□□□□ -0.11
CDC42-204ENST00000411827 CYTL1Q9NRR1 136 aa14.35□□□□□ -0.11
CDC42-204ENST00000411827 IGHV4OR15-8A0A075B7B6 117 aa14.34□□□□□ -0.11
CDC42-204ENST00000411827 A0A087WW49 117 aa14.34□□□□□ -0.11
CDC42-204ENST00000411827 A0A1W2PRX2 142 aa14.34□□□□□ -0.11
CDC42-204ENST00000411827 PPP5D1E7EU14 171 aa14.34□□□□□ -0.11
CDC42-204ENST00000411827 K7EMT4 169 aa14.34□□□□□ -0.11
CDC42-204ENST00000411827 M0QZ24 198 aa14.34□□□□□ -0.11
CDC42-204ENST00000411827 PSG1P11464 419 aa14.34□□□□□ -0.11
CDC42-204ENST00000411827 HOXD3P31249 432 aaPredicted RBP14.34□□□□□ -0.11
CDC42-204ENST00000411827 PLP1P60201 277 aa14.34□□□□□ -0.11
CDC42-204ENST00000411827 NSUN5P1Q3KNT7 163 aa14.34□□□□□ -0.11
CDC42-204ENST00000411827 REC114Q7Z4M0 266 aa14.34□□□□□ -0.11
CDC42-204ENST00000411827 BAP18Q8IXM2 172 aa14.34□□□□□ -0.11
CDC42-204ENST00000411827 UFC1Q9Y3C8 167 aa14.34□□□□□ -0.11
CDC42-204ENST00000411827 ANK2Q01484 3957 aa14.33□□□□□ -0.12
CDC42-204ENST00000411827 ELOA3CA0A087WX78 387 aaPredicted RBP14.33□□□□□ -0.12
CDC42-204ENST00000411827 TSPAN15O95858 294 aa14.33□□□□□ -0.12
CDC42-204ENST00000411827 TRBV12-3P01733 135 aa14.33□□□□□ -0.12
CDC42-204ENST00000411827 MBP02144 154 aa14.33□□□□□ -0.12
CDC42-204ENST00000411827 PRR20EP86478 221 aa14.33□□□□□ -0.12
CDC42-204ENST00000411827 PRR20CP86479 221 aa14.33□□□□□ -0.12
CDC42-204ENST00000411827 PRR20DP86480 221 aa14.33□□□□□ -0.12
CDC42-204ENST00000411827 PRR20BP86481 221 aa14.33□□□□□ -0.12
CDC42-204ENST00000411827 PRR20AP86496 221 aa14.33□□□□□ -0.12
CDC42-204ENST00000411827 KLF5Q13887 457 aaPredicted RBP14.33□□□□□ -0.12
CDC42-204ENST00000411827 OR2G3Q8NGZ4 309 aa14.33□□□□□ -0.12
CDC42-204ENST00000411827 RAX2Q96IS3 184 aa14.33□□□□□ -0.12
CDC42-204ENST00000411827 SLC39A9Q9NUM3 307 aa14.33□□□□□ -0.12
CDC42-204ENST00000411827 PEMTQ9UBM1 199 aa14.33□□□□□ -0.12
CDC42-204ENST00000411827 PUS1Q9Y606 427 aaKnown RBP eCLIP14.33□□□□□ -0.12
CDC42-204ENST00000411827 BOLA2-SMG1P6H3BVE0 249 aa14.32□□□□□ -0.12
CDC42-204ENST00000411827 YIF1AO95070 293 aa14.32□□□□□ -0.12
CDC42-204ENST00000411827 SEC11BP0C7V7 166 aa14.32□□□□□ -0.12
CDC42-204ENST00000411827 BMI1P35226 326 aa14.32□□□□□ -0.12
CDC42-204ENST00000411827 B2MP61769 119 aa14.32□□□□□ -0.12
CDC42-204ENST00000411827 ZNF90Q03938 601 aa14.32□□□□□ -0.12
CDC42-204ENST00000411827 OR1L4Q8NGR5 311 aa14.32□□□□□ -0.12
CDC42-204ENST00000411827 TMEM190Q8WZ59 177 aa14.32□□□□□ -0.12
CDC42-204ENST00000411827 MARC2Q969Z3 335 aa14.32□□□□□ -0.12
CDC42-204ENST00000411827 RNF125Q96EQ8 232 aa14.32□□□□□ -0.12
CDC42-204ENST00000411827 NARS2Q96I59 477 aaKnown RBP14.32□□□□□ -0.12
CDC42-204ENST00000411827 PFDN5Q99471 154 aa14.32□□□□□ -0.12
CDC42-204ENST00000411827 PXMP4Q9Y6I8 212 aa14.32□□□□□ -0.12
CDC42-204ENST00000411827 WI2-2373I1.2A0A1W2PRP0 233 aa14.31□□□□□ -0.12
CDC42-204ENST00000411827 A8MWP6 167 aa14.31□□□□□ -0.12
CDC42-204ENST00000411827 PF4P02776 101 aa14.31□□□□□ -0.12
CDC42-204ENST00000411827 LINC00869P0C866 280 aa14.31□□□□□ -0.12
CDC42-204ENST00000411827 ATP6V0CP27449 155 aa14.31□□□□□ -0.12
CDC42-204ENST00000411827 NKX2-5P52952 324 aaPredicted RBP14.31□□□□□ -0.12
CDC42-204ENST00000411827 TOMM20LQ6UXN7 152 aa14.31□□□□□ -0.12
CDC42-204ENST00000411827 C18orf65Q6ZTR6 163 aa14.31□□□□□ -0.12
CDC42-204ENST00000411827 STPG3Q8N7X2 389 aa14.31□□□□□ -0.12
CDC42-204ENST00000411827 HSD17B11Q8NBQ5 300 aa14.31□□□□□ -0.12
CDC42-204ENST00000411827 GATAD1Q8WUU5 269 aa14.31□□□□□ -0.12
CDC42-204ENST00000411827 PHYHIPLQ96FC7 376 aa14.31□□□□□ -0.12
CDC42-204ENST00000411827 RNF2Q99496 336 aa14.31□□□□□ -0.12
CDC42-204ENST00000411827 DAZ1Q9NQZ3 744 aaKnown RBP14.31□□□□□ -0.12
CDC42-204ENST00000411827 ZNF320A2RRD8 509 aa14.3□□□□□ -0.12
CDC42-204ENST00000411827 UMAD1C9J7I0 102 aa14.3□□□□□ -0.12
CDC42-204ENST00000411827 HYPMO75409 117 aa14.3□□□□□ -0.12
CDC42-204ENST00000411827 IL4P05112 153 aa14.3□□□□□ -0.12
CDC42-204ENST00000411827 SPP1P10451 314 aa14.3□□□□□ -0.12
CDC42-204ENST00000411827 DEFB136Q30KP8 78 aa14.3□□□□□ -0.12
CDC42-204ENST00000411827 METTL26Q96S19 204 aa14.3□□□□□ -0.12
CDC42-204ENST00000411827 A0A1W2PS18 150 aa14.29□□□□□ -0.12
CDC42-204ENST00000411827 NPPCP23582 126 aa14.29□□□□□ -0.12
CDC42-204ENST00000411827 ACOT6Q3I5F7 207 aaPredicted RBP14.29□□□□□ -0.12
CDC42-204ENST00000411827 RSG1Q9BU20 258 aa14.29□□□□□ -0.12
CDC42-204ENST00000411827 TMEM231Q9H6L2 316 aa14.29□□□□□ -0.12
CDC42-204ENST00000411827 ZFAND3Q9H8U3 227 aa14.29□□□□□ -0.12
CDC42-204ENST00000411827 DNAJC4Q9NNZ3 241 aa14.29□□□□□ -0.12
CDC42-204ENST00000411827 RABAC1Q9UI14 185 aa14.29□□□□□ -0.12
CDC42-204ENST00000411827 COX7A2P2O60397 106 aa14.28□□□□□ -0.12
CDC42-204ENST00000411827 CD5P06127 495 aa14.28□□□□□ -0.12
CDC42-204ENST00000411827 SYNJ2BPP57105 145 aa14.28□□□□□ -0.12
CDC42-204ENST00000411827 MIC13Q5XKP0 118 aa14.28□□□□□ -0.12
CDC42-204ENST00000411827 SPATA3Q8NHX4 192 aa14.28□□□□□ -0.12
CDC42-204ENST00000411827 ST8SIA2Q92186 375 aa14.28□□□□□ -0.12
CDC42-204ENST00000411827 ELOVL1Q9BW60 279 aa14.28□□□□□ -0.12
CDC42-204ENST00000411827 M6PRP20645 277 aa14.27□□□□□ -0.13
CDC42-204ENST00000411827 CRYBB3P26998 211 aa14.27□□□□□ -0.13
CDC42-204ENST00000411827 RAB5CP51148 216 aa14.27□□□□□ -0.13
CDC42-204ENST00000411827 LYZP61626 148 aa14.27□□□□□ -0.13
CDC42-204ENST00000411827 FFAR4Q5NUL3 377 aa14.27□□□□□ -0.13
CDC42-204ENST00000411827 OR9G4Q8NGQ1 327 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms