RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 NIPSNAP3BQ9BS92 247 aa10.14□□□□□ -0.79
HLA-DQB2-229ENST00000411527 VCX3AQ9NNX9 186 aa10.14□□□□□ -0.79
HLA-DQB2-229ENST00000411527 MTFP1Q9UDX5 166 aa10.14□□□□□ -0.79
HLA-DQB2-229ENST00000411527 NACAE9PAV3 2078 aa10.13□□□□□ -0.79
HLA-DQB2-229ENST00000411527 TEX48A0A1B0GUV7 120 aa10.13□□□□□ -0.79
HLA-DQB2-229ENST00000411527 OR5AC1P0C628 307 aa10.13□□□□□ -0.79
HLA-DQB2-229ENST00000411527 PSG1P11464 419 aa10.13□□□□□ -0.79
HLA-DQB2-229ENST00000411527 TBPP20226 339 aa10.13□□□□□ -0.79
HLA-DQB2-229ENST00000411527 VBP1P61758 197 aa10.13□□□□□ -0.79
HLA-DQB2-229ENST00000411527 C1orf134Q5TEV5 83 aa10.13□□□□□ -0.79
HLA-DQB2-229ENST00000411527 SELENOHQ8IZQ5 122 aaKnown RBP10.13□□□□□ -0.79
HLA-DQB2-229ENST00000411527 OR4B1Q8NGF8 309 aa10.13□□□□□ -0.79
HLA-DQB2-229ENST00000411527 LHFPL5Q8TAF8 219 aa10.13□□□□□ -0.79
HLA-DQB2-229ENST00000411527 GLYATL2Q8WU03 294 aa10.13□□□□□ -0.79
HLA-DQB2-229ENST00000411527 GPR146Q96CH1 333 aa10.13□□□□□ -0.79
HLA-DQB2-229ENST00000411527 SAV1Q9H4B6 383 aaPredicted RBP10.13□□□□□ -0.79
HLA-DQB2-229ENST00000411527 CACNG5Q9UF02 275 aa10.13□□□□□ -0.79
HLA-DQB2-229ENST00000411527 TEX13DA0A0J9YY54 714 aaPredicted RBP10.12□□□□□ -0.79
HLA-DQB2-229ENST00000411527 ID1P41134 155 aa10.12□□□□□ -0.79
HLA-DQB2-229ENST00000411527 MEF2DQ14814 521 aa10.12□□□□□ -0.79
HLA-DQB2-229ENST00000411527 FOXI2Q6ZQN5 318 aa10.12□□□□□ -0.79
HLA-DQB2-229ENST00000411527 RBPMSQ93062 196 aaKnown RBP10.12□□□□□ -0.79
HLA-DQB2-229ENST00000411527 RNF125Q96EQ8 232 aa10.12□□□□□ -0.79
HLA-DQB2-229ENST00000411527 ABHD1Q96SE0 405 aa10.12□□□□□ -0.79
HLA-DQB2-229ENST00000411527 PBDC1Q9BVG4 233 aa10.12□□□□□ -0.79
HLA-DQB2-229ENST00000411527 WDR12Q9GZL7 423 aaKnown RBP10.12□□□□□ -0.79
HLA-DQB2-229ENST00000411527 A0A087WXM4 84 aa10.11□□□□□ -0.79
HLA-DQB2-229ENST00000411527 TNFAIP8O95379 198 aa10.11□□□□□ -0.79
HLA-DQB2-229ENST00000411527 RAB3DO95716 219 aa10.11□□□□□ -0.79
HLA-DQB2-229ENST00000411527 RORCP51449 518 aa10.11□□□□□ -0.79
HLA-DQB2-229ENST00000411527 OXA1LQ15070 435 aa10.11□□□□□ -0.79
HLA-DQB2-229ENST00000411527 TMEM268Q5VZI3 342 aa10.11□□□□□ -0.79
HLA-DQB2-229ENST00000411527 MZT2AQ6P582 158 aa10.11□□□□□ -0.79
HLA-DQB2-229ENST00000411527 NOXA1Q86UR1 476 aa10.11□□□□□ -0.79
HLA-DQB2-229ENST00000411527 ZNF709Q8N972 641 aa10.11□□□□□ -0.79
HLA-DQB2-229ENST00000411527 TMEM229BQ8NBD8 167 aa10.11□□□□□ -0.79
HLA-DQB2-229ENST00000411527 RTBDNQ9BSG5 229 aaPredicted RBP10.11□□□□□ -0.79
HLA-DQB2-229ENST00000411527 FUNDC2Q9BWH2 189 aa10.11□□□□□ -0.79
HLA-DQB2-229ENST00000411527 SLC35B3Q9H1N7 401 aa10.11□□□□□ -0.79
HLA-DQB2-229ENST00000411527 PFDN2Q9UHV9 154 aa10.11□□□□□ -0.79
HLA-DQB2-229ENST00000411527 C14orf166Q9Y224 244 aaKnown RBP10.11□□□□□ -0.79
HLA-DQB2-229ENST00000411527 LOC102723971A0A1B0GUV8 181 aa10.1□□□□□ -0.79
HLA-DQB2-229ENST00000411527 HBE1P02100 147 aa10.1□□□□□ -0.79
HLA-DQB2-229ENST00000411527 NUP62P37198 522 aaPredicted RBP10.1□□□□□ -0.79
HLA-DQB2-229ENST00000411527 PSMB3P49720 205 aa10.1□□□□□ -0.79
HLA-DQB2-229ENST00000411527 TAS2R19P59542 299 aa10.1□□□□□ -0.79
HLA-DQB2-229ENST00000411527 KLF9Q13886 244 aaPredicted RBP10.1□□□□□ -0.79
HLA-DQB2-229ENST00000411527 STEAP1BQ6NZ63 245 aa10.1□□□□□ -0.79
HLA-DQB2-229ENST00000411527 TMEM88Q6PEY1 159 aa10.1□□□□□ -0.79
HLA-DQB2-229ENST00000411527 GSG1LQ6UXU4 331 aa10.1□□□□□ -0.79
HLA-DQB2-229ENST00000411527 C1orf158Q8N1D5 194 aa10.1□□□□□ -0.79
HLA-DQB2-229ENST00000411527 COQ8AQ8NI60 647 aa10.1□□□□□ -0.79
HLA-DQB2-229ENST00000411527 CLUHP3Q96NS8 147 aa10.1□□□□□ -0.79
HLA-DQB2-229ENST00000411527 C7orf50Q9BRJ6 194 aaKnown RBP10.1□□□□□ -0.79
HLA-DQB2-229ENST00000411527 NAA60Q9H7X0 242 aa10.1□□□□□ -0.79
HLA-DQB2-229ENST00000411527 EXTL2Q9UBQ6 330 aa10.1□□□□□ -0.79
HLA-DQB2-229ENST00000411527 GOLT1BQ9Y3E0 138 aa10.1□□□□□ -0.79
HLA-DQB2-229ENST00000411527 YTHDF2Q9Y5A9 579 aaKnown RBP10.1□□□□□ -0.79
HLA-DQB2-229ENST00000411527 DAD1P61803 113 aa10.09□□□□□ -0.79
HLA-DQB2-229ENST00000411527 PSG9Q00887 426 aa10.09□□□□□ -0.79
HLA-DQB2-229ENST00000411527 ZNF79Q15937 498 aa10.09□□□□□ -0.79
HLA-DQB2-229ENST00000411527 NMSQ5H8A3 153 aa10.09□□□□□ -0.79
HLA-DQB2-229ENST00000411527 FAM78BQ5VT40 261 aa10.09□□□□□ -0.79
HLA-DQB2-229ENST00000411527 OR8G2PQ6IF36 304 aa10.09□□□□□ -0.79
HLA-DQB2-229ENST00000411527 TMED3Q9Y3Q3 217 aa10.09□□□□□ -0.79
HLA-DQB2-229ENST00000411527 ZFP92A6NM28 416 aa10.08□□□□□ -0.8
HLA-DQB2-229ENST00000411527 F6UB75 175 aa10.08□□□□□ -0.8
HLA-DQB2-229ENST00000411527 SOCS3O14543 225 aa10.08□□□□□ -0.8
HLA-DQB2-229ENST00000411527 SULT1A3P0DMM9 295 aa10.08□□□□□ -0.8
HLA-DQB2-229ENST00000411527 SULT1A4P0DMN0 295 aa10.08□□□□□ -0.8
HLA-DQB2-229ENST00000411527 ZNF90Q03938 601 aa10.08□□□□□ -0.8
HLA-DQB2-229ENST00000411527 RRN3P1Q2M238 152 aa10.08□□□□□ -0.8
HLA-DQB2-229ENST00000411527 GPR107Q5VW38 600 aa10.08□□□□□ -0.8
HLA-DQB2-229ENST00000411527 SPATA31B1PQ5VZV4 182 aa10.08□□□□□ -0.8
HLA-DQB2-229ENST00000411527 FAAP20Q6NZ36 180 aa10.08□□□□□ -0.8
HLA-DQB2-229ENST00000411527 EBLN2Q6P2I7 272 aa10.08□□□□□ -0.8
HLA-DQB2-229ENST00000411527 C15orf40Q8WUR7 153 aa10.08□□□□□ -0.8
HLA-DQB2-229ENST00000411527 MAGT1Q9H0U3 335 aa10.08□□□□□ -0.8
HLA-DQB2-229ENST00000411527 CACFD1Q9UGQ2 172 aa10.08□□□□□ -0.8
HLA-DQB2-229ENST00000411527 U3KQ87 197 aa10.08□□□□□ -0.8
HLA-DQB2-229ENST00000411527 HSPG2P98160 4391 aa10.08□□□□□ -0.8
HLA-DQB2-229ENST00000411527 CRYM-AS1A6NIL9 109 aa10.07□□□□□ -0.8
HLA-DQB2-229ENST00000411527 PAX9P55771 341 aa10.07□□□□□ -0.8
HLA-DQB2-229ENST00000411527 SUPT4H1P63272 117 aaKnown RBP10.07□□□□□ -0.8
HLA-DQB2-229ENST00000411527 SURF2Q15527 256 aaPredicted RBP10.07□□□□□ -0.8
HLA-DQB2-229ENST00000411527 LGI3Q8N145 548 aa10.07□□□□□ -0.8
HLA-DQB2-229ENST00000411527 AP3S1Q92572 193 aa10.07□□□□□ -0.8
HLA-DQB2-229ENST00000411527 GPR132Q9UNW8 380 aa10.07□□□□□ -0.8
HLA-DQB2-229ENST00000411527 TMEM56-RWDD3S4R434 201 aa10.07□□□□□ -0.8
HLA-DQB2-229ENST00000411527 IGKV1D-37A0A075B6S9 117 aa10.06□□□□□ -0.8
HLA-DQB2-229ENST00000411527 A0A0J9YX75 114 aa10.06□□□□□ -0.8
HLA-DQB2-229ENST00000411527 C16orf90A8MZG2 172 aa10.06□□□□□ -0.8
HLA-DQB2-229ENST00000411527 DISC1C4P0D8 188 aa10.06□□□□□ -0.8
HLA-DQB2-229ENST00000411527 ISLRO14498 428 aa10.06□□□□□ -0.8
HLA-DQB2-229ENST00000411527 ZNF182P17025 639 aaPredicted RBP10.06□□□□□ -0.8
HLA-DQB2-229ENST00000411527 FAM3BP58499 235 aaPredicted RBP10.06□□□□□ -0.8
HLA-DQB2-229ENST00000411527 LYZP61626 148 aa10.06□□□□□ -0.8
HLA-DQB2-229ENST00000411527 TNP2Q05952 138 aa10.06□□□□□ -0.8
HLA-DQB2-229ENST00000411527 GAMTQ14353 236 aa10.06□□□□□ -0.8
HLA-DQB2-229ENST00000411527 C1orf194Q5T5A4 169 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms