RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 NANOGNBQ7Z5D8 188 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 EXOC8Q8IYI6 725 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 SLC38A6Q8IZM9 456 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 CYP4Z2PQ8N1L4 340 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 CBR4Q8N4T8 237 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 TTC29Q8NA56 475 aaPredicted RBP-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 MRPL30Q8TCC3 161 aaKnown RBP-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 SLC37A2Q8TED4 501 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 DOK4Q8TEW6 326 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 BIRC8Q96P09 236 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 RPRD1AQ96P16 312 aaPredicted RBP-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 NMNAT3Q96T66 252 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 COPS8Q99627 209 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 PSMG3Q9BT73 122 aaPredicted RBP-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 CALN1Q9BXU9 219 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 XPO4Q9C0E2 1151 aaKnown RBP-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 NAA50Q9GZZ1 169 aaKnown RBP-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 SLC35B3Q9H1N7 401 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 REEP4Q9H6H4 257 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 NOP10Q9NPE3 64 aaKnown RBP-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 MRPL40Q9NQ50 206 aaKnown RBP-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 ORC3Q9UBD5 711 aaPredicted RBP-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 RABL2AQ9UBK7 228 aaPredicted RBP-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 ARHGEF11O15085 1522 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 CLASP1Q7Z460 1538 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 PARP4Q9UKK3 1724 aaKnown RBP-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 MYH6P13533 1939 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 TET3O43151 1660 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 KDM5CP41229 1560 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 A0A1W2PPH5 198 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 MYL12BO14950 172 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 PAGE4O60829 102 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 AGTP01019 485 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 IGKCP01834 107 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 RHOCP08134 193 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 ANXA4P09525 319 aaPredicted RBP-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 MYL9P24844 172 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 MRPL19P49406 292 aaKnown RBP-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 RGS4P49798 205 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 NAPAP54920 295 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 YBEYP58557 167 aaPredicted RBP-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 HERVK_113P63121 156 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 MRPS6P82932 125 aaKnown RBP-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 BFSP1Q12934 665 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 HIST3H3Q16695 136 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 Q499Y3 187 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 CTXN3Q4LDR2 81 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 KHDC3LQ587J8 217 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 C9orf116Q5BN46 136 aaPredicted RBP-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 CARD16Q5EG05 197 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 PLCXD3Q63HM9 321 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 RWDD4Q6NW29 188 aaKnown RBP-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 SFXN4Q6P4A7 337 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 ANKRD37Q7Z713 158 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 LRRC6Q86X45 466 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 C1orf162Q8NEQ5 155 aaPredicted RBP-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 OR8J3Q8NGG0 315 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 OR5AR1Q8NGP9 310 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 OR2G2Q8NGZ5 317 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 SLC38A4Q969I6 547 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 TMEM230Q96A57 120 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 C12orf66Q96MD2 445 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 EBNA1BP2Q99848 306 aaKnown RBP-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 WFDC6Q9BQY6 131 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 ANAPC13Q9BS18 74 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 CRLF2Q9HC73 371 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 XAGE1AQ9HD64 81 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 FAM153AQ9UHL3 310 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 QRICH2Q9H0J4 1663 aa-2.61□□□□□ -2.83
RNU4-88P-201ENST00000411220 MAGI3Q5TCQ9 1506 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 ZFYVE16Q7Z3T8 1539 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 ROBO1Q9Y6N7 1651 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 A2ML1A8K2U0 1454 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 ZNF816-ZNF321PA0A0X1KG74 233 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 M0R135 149 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 OR1F1O43749 312 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 GMFGO60234 142 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 PRPSAP2O60256 369 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 TPST1O60507 370 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 HUS1O60921 280 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 MTX2O75431 263 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 DIRAS1O95057 198 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 OXSR1O95747 527 aaPredicted RBP-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 FGF1P05230 155 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 FBP1P09467 338 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 CRYGSP22914 178 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 CCR1P32246 355 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 CSKP41240 450 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 GEMP55040 296 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 RRAS2P62070 204 aaPredicted RBP-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 TFDP2Q14188 446 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 MAPK14Q16539 360 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 HFEQ30201 348 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 CCDC184Q52MB2 194 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 SPATA1Q5VX52 437 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 NPSR1Q6W5P4 371 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 CCDC186Q7Z3E2 898 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 TMEM17Q86X19 198 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 BAGE3Q86Y29 109 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 VKORC1L1Q8N0U8 176 aa-2.62□□□□□ -2.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms