RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 PATE2Q6UY27 113 aa10.79□□□□□ -0.68
LIMS1-205ENST00000410093 Q8N6K4 173 aa10.79□□□□□ -0.68
LIMS1-205ENST00000410093 IGFBPL1Q8WX77 278 aa10.79□□□□□ -0.68
LIMS1-205ENST00000410093 C12orf57Q99622 126 aa10.79□□□□□ -0.68
LIMS1-205ENST00000410093 CHRDL1Q9BU40 450 aa10.79□□□□□ -0.68
LIMS1-205ENST00000410093 WNT10AQ9GZT5 417 aa10.79□□□□□ -0.68
LIMS1-205ENST00000410093 OSTCQ9NRP0 149 aa10.79□□□□□ -0.68
LIMS1-205ENST00000410093 IL36BQ9NZH7 164 aa10.79□□□□□ -0.68
LIMS1-205ENST00000410093 TMEM14CQ9P0S9 112 aa10.79□□□□□ -0.68
LIMS1-205ENST00000410093 HILPDAQ9Y5L2 63 aa10.79□□□□□ -0.68
LIMS1-205ENST00000410093 A0A1W2PPQ1 181 aa10.79□□□□□ -0.68
LIMS1-205ENST00000410093 A0A1W2PPR1 153 aa10.79□□□□□ -0.68
LIMS1-205ENST00000410093 ISLRO14498 428 aa10.79□□□□□ -0.68
LIMS1-205ENST00000410093 TOX4O94842 621 aa10.79□□□□□ -0.68
LIMS1-205ENST00000410093 TRGC1P0CF51 173 aa10.79□□□□□ -0.68
LIMS1-205ENST00000410093 IGLC1P0CG04 106 aa10.79□□□□□ -0.68
LIMS1-205ENST00000410093 CRYBB3P26998 211 aa10.79□□□□□ -0.68
LIMS1-205ENST00000410093 S100A2P29034 98 aa10.79□□□□□ -0.68
LIMS1-205ENST00000410093 CNN1P51911 297 aaKnown RBP10.79□□□□□ -0.68
LIMS1-205ENST00000410093 NDUFA6P56556 154 aa10.79□□□□□ -0.68
LIMS1-205ENST00000410093 COA6Q5JTJ3 125 aaKnown RBP10.79□□□□□ -0.68
LIMS1-205ENST00000410093 LDLRAD2Q5SZI1 272 aa10.79□□□□□ -0.68
LIMS1-205ENST00000410093 FXYD5Q96DB9 178 aa10.79□□□□□ -0.68
LIMS1-205ENST00000410093 RASL11BQ9BPW5 248 aa10.79□□□□□ -0.68
LIMS1-205ENST00000410093 HIGD1AQ9Y241 93 aa10.79□□□□□ -0.68
LIMS1-205ENST00000410093 TRBV9A0A0B4J1U6 114 aa10.78□□□□□ -0.68
LIMS1-205ENST00000410093 GGTLC3B5MD39 225 aa10.78□□□□□ -0.68
LIMS1-205ENST00000410093 FCN1O00602 326 aa10.78□□□□□ -0.68
LIMS1-205ENST00000410093 GCGP01275 180 aa10.78□□□□□ -0.68
LIMS1-205ENST00000410093 DLX1P56177 255 aa10.78□□□□□ -0.68
LIMS1-205ENST00000410093 HES1Q14469 280 aa10.78□□□□□ -0.68
LIMS1-205ENST00000410093 CENPWQ5EE01 88 aa10.78□□□□□ -0.68
LIMS1-205ENST00000410093 ACTL10Q5JWF8 245 aa10.78□□□□□ -0.68
LIMS1-205ENST00000410093 TTC9CQ8N5M4 171 aa10.78□□□□□ -0.68
LIMS1-205ENST00000410093 NECAP1Q8NC96 275 aa10.78□□□□□ -0.68
LIMS1-205ENST00000410093 OR1B1Q8NGR6 318 aa10.78□□□□□ -0.68
LIMS1-205ENST00000410093 SGMS2Q8NHU3 365 aa10.78□□□□□ -0.68
LIMS1-205ENST00000410093 FRZBQ92765 325 aa10.78□□□□□ -0.68
LIMS1-205ENST00000410093 TMEM68Q96MH6 324 aa10.78□□□□□ -0.68
LIMS1-205ENST00000410093 RBM14Q96PK6 669 aaKnown RBP10.78□□□□□ -0.68
LIMS1-205ENST00000410093 GAR1Q9NY12 217 aaKnown RBP10.78□□□□□ -0.68
LIMS1-205ENST00000410093 CSMD1Q96PZ7 3565 aa10.78□□□□□ -0.68
LIMS1-205ENST00000410093 LRBAP50851 2863 aa10.77□□□□□ -0.68
LIMS1-205ENST00000410093 NAV3Q8IVL0 2385 aa10.77□□□□□ -0.69
LIMS1-205ENST00000410093 DCHS2Q6V1P9 2916 aa10.77□□□□□ -0.69
LIMS1-205ENST00000410093 HIST1H1BP16401 226 aaKnown RBP10.77□□□□□ -0.69
LIMS1-205ENST00000410093 ORM2P19652 201 aa10.77□□□□□ -0.69
LIMS1-205ENST00000410093 ZFP36P26651 326 aaKnown RBP10.77□□□□□ -0.69
LIMS1-205ENST00000410093 YPEL3P61236 119 aaPredicted RBP10.77□□□□□ -0.69
LIMS1-205ENST00000410093 LMO4P61968 165 aa10.77□□□□□ -0.69
LIMS1-205ENST00000410093 OR5T1Q8NG75 326 aa10.77□□□□□ -0.69
LIMS1-205ENST00000410093 ARPC1AQ92747 370 aa10.77□□□□□ -0.69
LIMS1-205ENST00000410093 MRPL36Q9P0J6 103 aaKnown RBP10.77□□□□□ -0.69
LIMS1-205ENST00000410093 FBN2P35556 2912 aa10.76□□□□□ -0.69
LIMS1-205ENST00000410093 MYCNOSP40205 109 aa10.76□□□□□ -0.69
LIMS1-205ENST00000410093 ERVFC1-1P60608 527 aa10.76□□□□□ -0.69
LIMS1-205ENST00000410093 KLRD1Q13241 179 aa10.76□□□□□ -0.69
LIMS1-205ENST00000410093 RPEL1Q2QD12 228 aa10.76□□□□□ -0.69
LIMS1-205ENST00000410093 DNLZQ5SXM8 178 aa10.76□□□□□ -0.69
LIMS1-205ENST00000410093 FAM231DQ6ZW35 169 aa10.76□□□□□ -0.69
LIMS1-205ENST00000410093 LHFPL4Q7Z7J7 247 aa10.76□□□□□ -0.69
LIMS1-205ENST00000410093 ZNF329Q86UD4 541 aa10.76□□□□□ -0.69
LIMS1-205ENST00000410093 TXN2Q99757 166 aa10.76□□□□□ -0.69
LIMS1-205ENST00000410093 ELOVL1Q9BW60 279 aa10.76□□□□□ -0.69
LIMS1-205ENST00000410093 TRAV5A0A0B4J249 113 aa10.75□□□□□ -0.69
LIMS1-205ENST00000410093 A0A0U1RQK1 487 aa10.75□□□□□ -0.69
LIMS1-205ENST00000410093 ZNF320A2RRD8 509 aa10.75□□□□□ -0.69
LIMS1-205ENST00000410093 K7EIM0 57 aa10.75□□□□□ -0.69
LIMS1-205ENST00000410093 PEX7O00628 323 aa10.75□□□□□ -0.69
LIMS1-205ENST00000410093 TOMM40O96008 361 aa10.75□□□□□ -0.69
LIMS1-205ENST00000410093 HLA-DRB1P01911 266 aa10.75□□□□□ -0.69
LIMS1-205ENST00000410093 NBEAP1P0C6P0 100 aa10.75□□□□□ -0.69
LIMS1-205ENST00000410093 RD3LP0DJH9 198 aa10.75□□□□□ -0.69
LIMS1-205ENST00000410093 TMEM11P17152 192 aa10.75□□□□□ -0.69
LIMS1-205ENST00000410093 FCGR2BP31994 310 aaPredicted RBP10.75□□□□□ -0.69
LIMS1-205ENST00000410093 KLK9Q2XQG4 91 aa10.75□□□□□ -0.69
LIMS1-205ENST00000410093 IGF2BP2-AS1Q96M15 143 aa10.75□□□□□ -0.69
LIMS1-205ENST00000410093 PIMREGQ9BSJ6 248 aa10.75□□□□□ -0.69
LIMS1-205ENST00000410093 KLK9Q9UKQ9 250 aa10.75□□□□□ -0.69
LIMS1-205ENST00000410093 DMRT1Q9Y5R6 373 aa10.75□□□□□ -0.69
LIMS1-205ENST00000410093 CSMD2Q7Z408 3487 aa10.75□□□□□ -0.69
LIMS1-205ENST00000410093 IGLV11-55A0A075B6I3 123 aa10.74□□□□□ -0.69
LIMS1-205ENST00000410093 K7EN84 100 aa10.74□□□□□ -0.69
LIMS1-205ENST00000410093 PSG1P11464 419 aa10.74□□□□□ -0.69
LIMS1-205ENST00000410093 MFAP4P55083 255 aa10.74□□□□□ -0.69
LIMS1-205ENST00000410093 TMEM183BQ1AE95 376 aa10.74□□□□□ -0.69
LIMS1-205ENST00000410093 TMEM183AQ8IXX5 376 aa10.74□□□□□ -0.69
LIMS1-205ENST00000410093 LYPD1Q8N2G4 141 aa10.74□□□□□ -0.69
LIMS1-205ENST00000410093 C5orf17Q8NAS9 161 aa10.74□□□□□ -0.69
LIMS1-205ENST00000410093 BPESC1Q9GZL8 116 aa10.74□□□□□ -0.69
LIMS1-205ENST00000410093 MRPL27Q9P0M9 148 aaKnown RBP10.74□□□□□ -0.69
LIMS1-205ENST00000410093 EPDR1Q9UM22 224 aa10.74□□□□□ -0.69
LIMS1-205ENST00000410093 KLF12Q9Y4X4 402 aa10.74□□□□□ -0.69
LIMS1-205ENST00000410093 PLXNB1O43157 2135 aa10.74□□□□□ -0.69
LIMS1-205ENST00000410093 MT-ND6P03923 174 aa10.74□□□□□ -0.69
LIMS1-205ENST00000410093 HIST1H1EP10412 219 aaKnown RBP10.74□□□□□ -0.69
LIMS1-205ENST00000410093 GP9P14770 177 aa10.74□□□□□ -0.69
LIMS1-205ENST00000410093 CX3CL1P78423 397 aa10.74□□□□□ -0.69
LIMS1-205ENST00000410093 PRB3Q04118 309 aaPredicted RBP10.74□□□□□ -0.69
LIMS1-205ENST00000410093 MORN5Q5VZ52 161 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms