RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 FAM90A8PA6NJQ4 464 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 FAM90A7PA6NKC0 464 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 FAM90A22PA8MWA6 464 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 FAM90A12PA8MX19 464 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 FAM90A5PA8MXJ8 464 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 FAM90A23PA8MXZ1 464 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 ZNF561-AS1K7EIQ3 104 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 FAM90A15PP0C7V4 464 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 FAM90A13PP0C7W8 464 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 FAM90A14PP0C7W9 464 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 FAM90A24PP0C7X0 464 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 CTAG1AP78358 180 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 SS18Q15532 418 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 CYSLTR1Q9Y271 337 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 COX5BP10606 129 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 FSTP19883 344 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 MAJINQ3KP22 176 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 CHCHD2Q9Y6H1 151 aaPredicted RBP9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 IGLV1-36A0A0B4J1U3 117 aa9.36□□□□□ -0.91
PRPF40A-202ENST00000410080 EIF4EBP2Q13542 120 aaPredicted RBP9.36□□□□□ -0.91
PRPF40A-202ENST00000410080 SPSB3Q6PJ21 355 aa9.36□□□□□ -0.91
PRPF40A-202ENST00000410080 ZNF114Q8NC26 417 aa9.36□□□□□ -0.91
PRPF40A-202ENST00000410080 TMEM126AQ9H061 195 aa9.36□□□□□ -0.91
PRPF40A-202ENST00000410080 POC1AQ8NBT0 407 aa9.36□□□□□ -0.91
PRPF40A-202ENST00000410080 RNF125Q96EQ8 232 aa9.36□□□□□ -0.91
PRPF40A-202ENST00000410080 SMDT1Q9H4I9 107 aa9.36□□□□□ -0.91
PRPF40A-202ENST00000410080 ARHGAP32A7KAX9 2087 aa9.36□□□□□ -0.91
PRPF40A-202ENST00000410080 CXCL2P19875 107 aa9.36□□□□□ -0.91
PRPF40A-202ENST00000410080 CACNG8Q8WXS5 425 aa9.36□□□□□ -0.91
PRPF40A-202ENST00000410080 GVINP1Q7Z2Y8 2422 aa9.36□□□□□ -0.91
PRPF40A-202ENST00000410080 PEF1Q9UBV8 284 aaKnown RBP9.36□□□□□ -0.91
PRPF40A-202ENST00000410080 IRF3Q14653 427 aa9.36□□□□□ -0.91
PRPF40A-202ENST00000410080 NPIPB13A6NJU9 1138 aa9.36□□□□□ -0.91
PRPF40A-202ENST00000410080 NPIPB5A8MRT5 1133 aa9.36□□□□□ -0.91
PRPF40A-202ENST00000410080 MTURNQ8N3F0 131 aa9.36□□□□□ -0.91
PRPF40A-202ENST00000410080 SSBP4Q9BWG4 385 aaPredicted RBP9.36□□□□□ -0.91
PRPF40A-202ENST00000410080 A0A0G2JK05 382 aa9.35□□□□□ -0.91
PRPF40A-202ENST00000410080 DAD1P61803 113 aa9.35□□□□□ -0.91
PRPF40A-202ENST00000410080 TEX38Q6PEX7 206 aa9.35□□□□□ -0.91
PRPF40A-202ENST00000410080 GATAD1Q8WUU5 269 aa9.35□□□□□ -0.91
PRPF40A-202ENST00000410080 IGHMP01871 453 aa9.35□□□□□ -0.91
PRPF40A-202ENST00000410080 RND3P61587 244 aa9.35□□□□□ -0.91
PRPF40A-202ENST00000410080 NR2C2APQ86WQ0 139 aa9.35□□□□□ -0.91
PRPF40A-202ENST00000410080 E9PLN8 166 aa9.35□□□□□ -0.91
PRPF40A-202ENST00000410080 CCL1P22362 96 aa9.35□□□□□ -0.91
PRPF40A-202ENST00000410080 TMEM187Q14656 261 aa9.35□□□□□ -0.91
PRPF40A-202ENST00000410080 SP5Q6BEB4 398 aaPredicted RBP9.35□□□□□ -0.91
PRPF40A-202ENST00000410080 MORN3Q6PF18 240 aaPredicted RBP9.35□□□□□ -0.91
PRPF40A-202ENST00000410080 NKAPP1Q8N9T2 125 aa9.35□□□□□ -0.91
PRPF40A-202ENST00000410080 SLC50A1Q9BRV3 221 aa9.35□□□□□ -0.91
PRPF40A-202ENST00000410080 PGPEP1LA6NFU8 196 aa9.35□□□□□ -0.91
PRPF40A-202ENST00000410080 C12orf77C9JDV5 145 aa9.35□□□□□ -0.91
PRPF40A-202ENST00000410080 CIARTQ8N365 385 aaPredicted RBP9.35□□□□□ -0.91
PRPF40A-202ENST00000410080 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.35□□□□□ -0.91
PRPF40A-202ENST00000410080 SLC25A38Q96DW6 304 aa9.35□□□□□ -0.91
PRPF40A-202ENST00000410080 NRN1Q9NPD7 142 aa9.35□□□□□ -0.91
PRPF40A-202ENST00000410080 A0A1B0GV90 55 aa9.35□□□□□ -0.91
PRPF40A-202ENST00000410080 A0A1W2PR77 199 aa9.35□□□□□ -0.91
PRPF40A-202ENST00000410080 MBD3L4A6NDZ8 208 aaPredicted RBP9.35□□□□□ -0.91
PRPF40A-202ENST00000410080 MBD3L3A6NE82 208 aaPredicted RBP9.35□□□□□ -0.91
PRPF40A-202ENST00000410080 MBD3L5A6NJ08 208 aaPredicted RBP9.35□□□□□ -0.91
PRPF40A-202ENST00000410080 PLA2G10O15496 165 aa9.35□□□□□ -0.91
PRPF40A-202ENST00000410080 Q0VFX4 171 aa9.35□□□□□ -0.91
PRPF40A-202ENST00000410080 MBD3L2Q8NHZ7 208 aaPredicted RBP9.35□□□□□ -0.91
PRPF40A-202ENST00000410080 OTORQ9NRC9 128 aa9.35□□□□□ -0.91
PRPF40A-202ENST00000410080 GCM2O75603 506 aaPredicted RBP9.34□□□□□ -0.91
PRPF40A-202ENST00000410080 WISP3O95389 354 aaPredicted RBP9.34□□□□□ -0.91
PRPF40A-202ENST00000410080 ZNF525Q8N782 197 aa9.34□□□□□ -0.91
PRPF40A-202ENST00000410080 FNDC4Q9H6D8 234 aaPredicted RBP9.34□□□□□ -0.91
PRPF40A-202ENST00000410080 SIP14410 1827 aa9.34□□□□□ -0.91
PRPF40A-202ENST00000410080 SRRM4A7MD48 611 aaKnown RBP9.34□□□□□ -0.91
PRPF40A-202ENST00000410080 B4DSR2 109 aa9.34□□□□□ -0.91
PRPF40A-202ENST00000410080 A0A0G2JMZ2 1700 aa9.34□□□□□ -0.91
PRPF40A-202ENST00000410080 LRRC37A2A6NM11 1700 aa9.34□□□□□ -0.91
PRPF40A-202ENST00000410080 MLNRO43193 412 aa9.34□□□□□ -0.91
PRPF40A-202ENST00000410080 UCP3P55916 312 aa9.34□□□□□ -0.91
PRPF40A-202ENST00000410080 RBMY1FQ15415 496 aaKnown RBP9.34□□□□□ -0.91
PRPF40A-202ENST00000410080 C20orf204Q6ZNR8 217 aa9.34□□□□□ -0.91
PRPF40A-202ENST00000410080 IL36BQ9NZH7 164 aa9.34□□□□□ -0.91
PRPF40A-202ENST00000410080 TRAV9-2A0A087WT02 112 aa9.34□□□□□ -0.91
PRPF40A-202ENST00000410080 RPL36AP83881 106 aaKnown RBP9.34□□□□□ -0.91
PRPF40A-202ENST00000410080 STPG2Q8N412 459 aa9.34□□□□□ -0.91
PRPF40A-202ENST00000410080 RPL36ALQ969Q0 106 aaKnown RBP9.34□□□□□ -0.91
PRPF40A-202ENST00000410080 TNRC6BQ9UPQ9 1833 aaKnown RBP9.34□□□□□ -0.91
PRPF40A-202ENST00000410080 C15orf61A6NNL5 157 aa9.34□□□□□ -0.91
PRPF40A-202ENST00000410080 IQCF6A8MYZ5 107 aa9.34□□□□□ -0.91
PRPF40A-202ENST00000410080 VWC2LB2RUY7 222 aa9.34□□□□□ -0.91
PRPF40A-202ENST00000410080 DPM2O94777 84 aa9.34□□□□□ -0.91
PRPF40A-202ENST00000410080 OR10W1Q8NGF6 305 aa9.34□□□□□ -0.91
PRPF40A-202ENST00000410080 C1orf159Q96HA4 380 aa9.33□□□□□ -0.92
PRPF40A-202ENST00000410080 LGALS1P09382 135 aaKnown RBP9.33□□□□□ -0.92
PRPF40A-202ENST00000410080 FOXF2Q12947 444 aa9.33□□□□□ -0.92
PRPF40A-202ENST00000410080 ZNF672Q499Z4 452 aaPredicted RBP9.33□□□□□ -0.92
PRPF40A-202ENST00000410080 RNF166Q96A37 237 aaPredicted RBP9.33□□□□□ -0.92
PRPF40A-202ENST00000410080 IGHV1-18A0A0C4DH31 117 aa9.33□□□□□ -0.92
PRPF40A-202ENST00000410080 PSPNO60542 156 aa9.33□□□□□ -0.92
PRPF40A-202ENST00000410080 ZNF600Q6ZNG1 722 aa9.33□□□□□ -0.92
PRPF40A-202ENST00000410080 TRAV13-1A0A0B4J241 112 aa9.33□□□□□ -0.92
PRPF40A-202ENST00000410080 J3QW42 95 aa9.33□□□□□ -0.92
PRPF40A-202ENST00000410080 ATG2AQ2TAZ0 1938 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms