RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 TRAV25A0A0B4J276 109 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 ZNF561-AS1K7EIQ3 104 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 LIMS1P48059 325 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 DEFB131AP59861 70 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 TMEM155Q4W5P6 130 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 MBD3L1Q8WWY6 194 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 SDHCQ99643 169 aaPredicted RBP6.97□□□□□ -1.29
SCN9A-203ENST00000409672 MORN2Q502X0 79 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 DMRTC2Q8IXT2 367 aaPredicted RBP6.97□□□□□ -1.29
SCN9A-203ENST00000409672 C9orf62Q8N4C0 152 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 MDS2Q8NDY4 140 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 RSPO3Q9BXY4 272 aaPredicted RBP6.97□□□□□ -1.29
SCN9A-203ENST00000409672 GGTLC3B5MD39 225 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 TOMM40O96008 361 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 SAA4P35542 130 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 FOXG1P55316 489 aaPredicted RBP6.97□□□□□ -1.29
SCN9A-203ENST00000409672 LINC00205P59089 165 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 ERCC8Q13216 396 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 SCRT1Q9BWW7 348 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 IQCF6A8MYZ5 107 aa6.96□□□□□ -1.29
SCN9A-203ENST00000409672 NAT1P18440 290 aa6.96□□□□□ -1.29
SCN9A-203ENST00000409672 Q8TAT8 98 aa6.96□□□□□ -1.29
SCN9A-203ENST00000409672 RPP21Q9H633 154 aaKnown RBP6.96□□□□□ -1.29
SCN9A-203ENST00000409672 CHTOPQ9Y3Y2 248 aaKnown RBP6.96□□□□□ -1.29
SCN9A-203ENST00000409672 HLA-DQB1P01920 261 aa6.96□□□□□ -1.29
SCN9A-203ENST00000409672 C22orf46C9J442 243 aa6.96□□□□□ -1.3
SCN9A-203ENST00000409672 OR9G9P0C7N8 305 aa6.96□□□□□ -1.3
SCN9A-203ENST00000409672 GATAD1Q8WUU5 269 aa6.96□□□□□ -1.3
SCN9A-203ENST00000409672 ANAPC10Q9UM13 185 aa6.96□□□□□ -1.3
SCN9A-203ENST00000409672 A0A0J9YY99 117 aa6.96□□□□□ -1.3
SCN9A-203ENST00000409672 DKK1O94907 266 aa6.96□□□□□ -1.3
SCN9A-203ENST00000409672 SLC25A16P16260 332 aa6.96□□□□□ -1.3
SCN9A-203ENST00000409672 CSRP1P21291 193 aaKnown RBP6.96□□□□□ -1.3
SCN9A-203ENST00000409672 CTAG1AP78358 180 aa6.96□□□□□ -1.3
SCN9A-203ENST00000409672 SAXO1Q8IYX7 474 aa6.96□□□□□ -1.3
SCN9A-203ENST00000409672 TMEM126AQ9H061 195 aa6.96□□□□□ -1.3
SCN9A-203ENST00000409672 LOC102723996A0A087X1L8 192 aa6.96□□□□□ -1.3
SCN9A-203ENST00000409672 NAPSAO96009 420 aa6.96□□□□□ -1.3
SCN9A-203ENST00000409672 GVINP1Q7Z2Y8 2422 aa6.96□□□□□ -1.3
SCN9A-203ENST00000409672 TRGV11A0A075B6L2 103 aa6.96□□□□□ -1.3
SCN9A-203ENST00000409672 PAX9P55771 341 aa6.96□□□□□ -1.3
SCN9A-203ENST00000409672 FOXL1Q12952 345 aa6.96□□□□□ -1.3
SCN9A-203ENST00000409672 IGHV3-38A0A0C4DH36 116 aa6.96□□□□□ -1.3
SCN9A-203ENST00000409672 IGF2BP2-AS1Q96M15 143 aa6.96□□□□□ -1.3
SCN9A-203ENST00000409672 KLK9Q9UKQ9 250 aa6.96□□□□□ -1.3
SCN9A-203ENST00000409672 ROS1P08922 2347 aa6.96□□□□□ -1.3
SCN9A-203ENST00000409672 C5orf24Q7Z6I8 188 aa6.95□□□□□ -1.3
SCN9A-203ENST00000409672 FNDC4Q9H6D8 234 aaPredicted RBP6.95□□□□□ -1.3
SCN9A-203ENST00000409672 GAGE12BA1L429 117 aa6.95□□□□□ -1.3
SCN9A-203ENST00000409672 GAGE7O76087 117 aa6.95□□□□□ -1.3
SCN9A-203ENST00000409672 GAGE12FP0CL80 117 aa6.95□□□□□ -1.3
SCN9A-203ENST00000409672 GAGE12GP0CL81 117 aa6.95□□□□□ -1.3
SCN9A-203ENST00000409672 GAGE12IP0CL82 117 aa6.95□□□□□ -1.3
SCN9A-203ENST00000409672 ORMDL3Q8N138 153 aa6.95□□□□□ -1.3
SCN9A-203ENST00000409672 CFHR5Q9BXR6 569 aa6.95□□□□□ -1.3
SCN9A-203ENST00000409672 SMIM8Q96KF7 97 aa6.95□□□□□ -1.3
SCN9A-203ENST00000409672 COL4A6Q14031 1691 aa6.95□□□□□ -1.3
SCN9A-203ENST00000409672 EFNA2O43921 213 aa6.95□□□□□ -1.3
SCN9A-203ENST00000409672 PRB2P02812 416 aaPredicted RBP6.95□□□□□ -1.3
SCN9A-203ENST00000409672 PKDREJQ9NTG1 2253 aa6.95□□□□□ -1.3
SCN9A-203ENST00000409672 TRAV12-2A0A075B6T6 113 aa6.95□□□□□ -1.3
SCN9A-203ENST00000409672 PLA2G10O15496 165 aa6.95□□□□□ -1.3
SCN9A-203ENST00000409672 IGFBPL1Q8WX77 278 aa6.95□□□□□ -1.3
SCN9A-203ENST00000409672 EML6Q6ZMW3 1958 aa6.95□□□□□ -1.3
SCN9A-203ENST00000409672 DPRXA6NFQ7 191 aa6.95□□□□□ -1.3
SCN9A-203ENST00000409672 SPINK13Q1W4C9 94 aa6.95□□□□□ -1.3
SCN9A-203ENST00000409672 SPCS1Q9Y6A9 102 aa6.95□□□□□ -1.3
SCN9A-203ENST00000409672 CLPSL1A2RUU4 121 aa6.95□□□□□ -1.3
SCN9A-203ENST00000409672 TCRAP04437 139 aa6.95□□□□□ -1.3
SCN9A-203ENST00000409672 HIST1H2BAQ96A08 127 aa6.95□□□□□ -1.3
SCN9A-203ENST00000409672 IGKV1OR2-108A0A075B7D4 117 aa6.94□□□□□ -1.3
SCN9A-203ENST00000409672 GAGE12JA6NER3 117 aa6.94□□□□□ -1.3
SCN9A-203ENST00000409672 VWC2LB2RUY7 222 aa6.94□□□□□ -1.3
SCN9A-203ENST00000409672 ZNF883P0CG24 379 aa6.94□□□□□ -1.3
SCN9A-203ENST00000409672 GAGE1Q13065 139 aa6.94□□□□□ -1.3
SCN9A-203ENST00000409672 GAGE4Q13068 117 aa6.94□□□□□ -1.3
SCN9A-203ENST00000409672 GAGE5Q13069 117 aa6.94□□□□□ -1.3
SCN9A-203ENST00000409672 GAGE13Q4V321 117 aa6.94□□□□□ -1.3
SCN9A-203ENST00000409672 COX5BP10606 129 aa6.94□□□□□ -1.3
SCN9A-203ENST00000409672 GPX4P36969 197 aaPredicted RBP6.94□□□□□ -1.3
SCN9A-203ENST00000409672 TMEM256Q8N2U0 113 aa6.94□□□□□ -1.3
SCN9A-203ENST00000409672 PAQR4Q8N4S7 273 aaPredicted RBP6.94□□□□□ -1.3
SCN9A-203ENST00000409672 MRPS18AQ9NVS2 196 aaKnown RBP6.94□□□□□ -1.3
SCN9A-203ENST00000409672 PGPEP1LA6NFU8 196 aa6.94□□□□□ -1.3
SCN9A-203ENST00000409672 PFN2P35080 140 aa6.94□□□□□ -1.3
SCN9A-203ENST00000409672 CR1LQ2VPA4 569 aa6.94□□□□□ -1.3
SCN9A-203ENST00000409672 C20orf204Q6ZNR8 217 aa6.94□□□□□ -1.3
SCN9A-203ENST00000409672 NRGNQ92686 78 aa6.94□□□□□ -1.3
SCN9A-203ENST00000409672 PRDM13Q9H4Q3 707 aa6.94□□□□□ -1.3
SCN9A-203ENST00000409672 RLFQ13129 1914 aa6.94□□□□□ -1.3
SCN9A-203ENST00000409672 RPL36AP83881 106 aaKnown RBP6.94□□□□□ -1.3
SCN9A-203ENST00000409672 TMEM144Q7Z5S9 345 aa6.94□□□□□ -1.3
SCN9A-203ENST00000409672 RPL36ALQ969Q0 106 aaKnown RBP6.94□□□□□ -1.3
SCN9A-203ENST00000409672 NHP2Q9NX24 153 aaKnown RBP6.94□□□□□ -1.3
SCN9A-203ENST00000409672 SMIM10L1P0DMW3 83 aa6.94□□□□□ -1.3
SCN9A-203ENST00000409672 ZNF600Q6ZNG1 722 aa6.94□□□□□ -1.3
SCN9A-203ENST00000409672 SMIM10Q96HG1 83 aa6.94□□□□□ -1.3
SCN9A-203ENST00000409672 UCP1P25874 307 aa6.94□□□□□ -1.3
SCN9A-203ENST00000409672 UBE2E1P51965 193 aa6.94□□□□□ -1.3
SCN9A-203ENST00000409672 SS18Q15532 418 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms