RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 SUMO1P63165 101 aaKnown RBP12.16□□□□□ -0.46
SCAMP4-202ENST00000409472 KLRD1Q13241 179 aa12.16□□□□□ -0.46
SCAMP4-202ENST00000409472 TNXAQ16473 311 aa12.16□□□□□ -0.46
SCAMP4-202ENST00000409472 PRSS8Q16651 343 aa12.16□□□□□ -0.46
SCAMP4-202ENST00000409472 LHFPL4Q7Z7J7 247 aa12.16□□□□□ -0.46
SCAMP4-202ENST00000409472 NPIPB3Q92617 1050 aa12.16□□□□□ -0.46
SCAMP4-202ENST00000409472 UHRF2Q96PU4 802 aa12.16□□□□□ -0.46
SCAMP4-202ENST00000409472 PSMB11A5LHX3 300 aa12.16□□□□□ -0.46
SCAMP4-202ENST00000409472 NDUFS7O75251 213 aa12.16□□□□□ -0.46
SCAMP4-202ENST00000409472 ESDP10768 282 aa12.16□□□□□ -0.46
SCAMP4-202ENST00000409472 UQCRFS1P47985 274 aa12.16□□□□□ -0.46
SCAMP4-202ENST00000409472 RNF2Q99496 336 aa12.16□□□□□ -0.46
SCAMP4-202ENST00000409472 HSPB9Q9BQS6 159 aa12.16□□□□□ -0.46
SCAMP4-202ENST00000409472 PRSS47A8MTI9 375 aa12.15□□□□□ -0.46
SCAMP4-202ENST00000409472 INS-IGF2F8WCM5 200 aa12.15□□□□□ -0.46
SCAMP4-202ENST00000409472 NUPR1O60356 82 aa12.15□□□□□ -0.46
SCAMP4-202ENST00000409472 OR7C2O60412 319 aa12.15□□□□□ -0.46
SCAMP4-202ENST00000409472 VENTXO95231 258 aa12.15□□□□□ -0.46
SCAMP4-202ENST00000409472 MOSP00540 346 aa12.15□□□□□ -0.46
SCAMP4-202ENST00000409472 IL3RAP26951 378 aa12.15□□□□□ -0.46
SCAMP4-202ENST00000409472 MC5RP33032 325 aa12.15□□□□□ -0.46
SCAMP4-202ENST00000409472 Q6ZN92 141 aa12.15□□□□□ -0.46
SCAMP4-202ENST00000409472 OR8B3Q8NGG8 313 aa12.15□□□□□ -0.46
SCAMP4-202ENST00000409472 NUDT11Q96G61 164 aa12.15□□□□□ -0.46
SCAMP4-202ENST00000409472 OR8B2Q96RD0 313 aa12.15□□□□□ -0.46
SCAMP4-202ENST00000409472 RPH3ALQ9UNE2 315 aa12.15□□□□□ -0.46
SCAMP4-202ENST00000409472 INSIG2Q9Y5U4 225 aa12.15□□□□□ -0.46
SCAMP4-202ENST00000409472 ZFHX3Q15911 3703 aa12.15□□□□□ -0.46
SCAMP4-202ENST00000409472 TRAV30A0A087WSZ9 112 aa12.15□□□□□ -0.46
SCAMP4-202ENST00000409472 CRYGBP07316 175 aa12.15□□□□□ -0.46
SCAMP4-202ENST00000409472 ARF6P62330 175 aa12.15□□□□□ -0.46
SCAMP4-202ENST00000409472 FBXL15Q9H469 300 aa12.15□□□□□ -0.46
SCAMP4-202ENST00000409472 WNK2Q9Y3S1 2297 aa12.15□□□□□ -0.47
SCAMP4-202ENST00000409472 A0A0U1RQK1 487 aa12.14□□□□□ -0.47
SCAMP4-202ENST00000409472 A0A1W2PRD5 423 aa12.14□□□□□ -0.47
SCAMP4-202ENST00000409472 A0A1W2PRF3 423 aa12.14□□□□□ -0.47
SCAMP4-202ENST00000409472 A0A1W2PRM7 423 aa12.14□□□□□ -0.47
SCAMP4-202ENST00000409472 ZNF320A2RRD8 509 aa12.14□□□□□ -0.47
SCAMP4-202ENST00000409472 GGTLC3B5MD39 225 aa12.14□□□□□ -0.47
SCAMP4-202ENST00000409472 K7EN84 100 aa12.14□□□□□ -0.47
SCAMP4-202ENST00000409472 CD24P25063 80 aa12.14□□□□□ -0.47
SCAMP4-202ENST00000409472 CDKN1AP38936 164 aa12.14□□□□□ -0.47
SCAMP4-202ENST00000409472 SPATA45Q537H7 98 aa12.14□□□□□ -0.47
SCAMP4-202ENST00000409472 SIGLEC9Q9Y336 463 aa12.14□□□□□ -0.47
SCAMP4-202ENST00000409472 CELSR1Q9NYQ6 3014 aa12.14□□□□□ -0.47
SCAMP4-202ENST00000409472 NDUFS8O00217 210 aa12.14□□□□□ -0.47
SCAMP4-202ENST00000409472 FCN1O00602 326 aa12.14□□□□□ -0.47
SCAMP4-202ENST00000409472 CD99P14209 185 aa12.14□□□□□ -0.47
SCAMP4-202ENST00000409472 KLHDC1Q8N7A1 406 aa12.14□□□□□ -0.47
SCAMP4-202ENST00000409472 OCC1Q8TAD7 63 aa12.14□□□□□ -0.47
SCAMP4-202ENST00000409472 C8orf46Q8TAG6 207 aa12.14□□□□□ -0.47
SCAMP4-202ENST00000409472 RAB1BQ9H0U4 201 aa12.14□□□□□ -0.47
SCAMP4-202ENST00000409472 LGALS7P47929 136 aa12.13□□□□□ -0.47
SCAMP4-202ENST00000409472 PRRX1P54821 245 aa12.13□□□□□ -0.47
SCAMP4-202ENST00000409472 PATE2Q6UY27 113 aa12.13□□□□□ -0.47
SCAMP4-202ENST00000409472 LY6G5BQ8NDX9 201 aa12.13□□□□□ -0.47
SCAMP4-202ENST00000409472 CACNG8Q8WXS5 425 aa12.13□□□□□ -0.47
SCAMP4-202ENST00000409472 TNFRSF14Q92956 283 aa12.13□□□□□ -0.47
SCAMP4-202ENST00000409472 RPEQ96AT9 228 aa12.13□□□□□ -0.47
SCAMP4-202ENST00000409472 SMIM12Q96EX1 92 aa12.13□□□□□ -0.47
SCAMP4-202ENST00000409472 FAM167A-AS1Q96KT0 104 aa12.13□□□□□ -0.47
SCAMP4-202ENST00000409472 SLC25A2Q9BXI2 301 aa12.13□□□□□ -0.47
SCAMP4-202ENST00000409472 A0A1B0GUS0 222 aa12.13□□□□□ -0.47
SCAMP4-202ENST00000409472 LY6LH3BQJ8 138 aa12.13□□□□□ -0.47
SCAMP4-202ENST00000409472 PYYP10082 97 aa12.13□□□□□ -0.47
SCAMP4-202ENST00000409472 CD33P20138 364 aa12.13□□□□□ -0.47
SCAMP4-202ENST00000409472 CTRLP40313 264 aa12.13□□□□□ -0.47
SCAMP4-202ENST00000409472 ATP5IP56385 69 aaPredicted RBP12.13□□□□□ -0.47
SCAMP4-202ENST00000409472 SLC25A33Q9BSK2 321 aa12.13□□□□□ -0.47
SCAMP4-202ENST00000409472 SAMD10Q9BYL1 202 aa12.13□□□□□ -0.47
SCAMP4-202ENST00000409472 ZNF586Q9NXT0 402 aa12.13□□□□□ -0.47
SCAMP4-202ENST00000409472 SPTAN1Q13813 2472 aaKnown RBP12.13□□□□□ -0.47
SCAMP4-202ENST00000409472 TIMM23O14925 209 aa12.12□□□□□ -0.47
SCAMP4-202ENST00000409472 IGLC2P0DOY2 106 aa12.12□□□□□ -0.47
SCAMP4-202ENST00000409472 IGLC3P0DOY3 106 aa12.12□□□□□ -0.47
SCAMP4-202ENST00000409472 RPL27AP46776 148 aaKnown RBP12.12□□□□□ -0.47
SCAMP4-202ENST00000409472 OCIAD2Q56VL3 154 aa12.12□□□□□ -0.47
SCAMP4-202ENST00000409472 TECRQ9NZ01 308 aaKnown RBP12.12□□□□□ -0.47
SCAMP4-202ENST00000409472 HILPDAQ9Y5L2 63 aa12.12□□□□□ -0.47
SCAMP4-202ENST00000409472 TEX22C9J3V5 150 aa12.12□□□□□ -0.47
SCAMP4-202ENST00000409472 FSTL3O95633 263 aa12.12□□□□□ -0.47
SCAMP4-202ENST00000409472 LIPFP07098 398 aa12.12□□□□□ -0.47
SCAMP4-202ENST00000409472 CRYBB3P26998 211 aa12.12□□□□□ -0.47
SCAMP4-202ENST00000409472 COMPP49747 757 aaPredicted RBP12.12□□□□□ -0.47
SCAMP4-202ENST00000409472 ASPHD1Q5U4P2 390 aa12.12□□□□□ -0.47
SCAMP4-202ENST00000409472 TEX45Q8NA69 505 aa12.12□□□□□ -0.47
SCAMP4-202ENST00000409472 C11orf52Q96A22 123 aa12.12□□□□□ -0.47
SCAMP4-202ENST00000409472 SFRP2Q96HF1 295 aa12.12□□□□□ -0.47
SCAMP4-202ENST00000409472 CDC42EP3Q9UKI2 254 aa12.12□□□□□ -0.47
SCAMP4-202ENST00000409472 MRPS16Q9Y3D3 137 aaKnown RBP12.12□□□□□ -0.47
SCAMP4-202ENST00000409472 M0QZ24 198 aa12.11□□□□□ -0.47
SCAMP4-202ENST00000409472 HYPMO75409 117 aa12.11□□□□□ -0.47
SCAMP4-202ENST00000409472 PPP1R27Q86WC6 154 aa12.11□□□□□ -0.47
SCAMP4-202ENST00000409472 MMD2Q8IY49 270 aa12.11□□□□□ -0.47
SCAMP4-202ENST00000409472 CST9LQ9H4G1 147 aa12.11□□□□□ -0.47
SCAMP4-202ENST00000409472 PRORYQ9H606 182 aa12.11□□□□□ -0.47
SCAMP4-202ENST00000409472 FLNCQ14315 2725 aa12.11□□□□□ -0.47
SCAMP4-202ENST00000409472 TCRBV4S1A1TA0A5B7 111 aa12.11□□□□□ -0.47
SCAMP4-202ENST00000409472 DIRC3C9JPN6 131 aa12.11□□□□□ -0.47
SCAMP4-202ENST00000409472 C19orf84I3L1E1 186 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms