RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 GGACTQ9BVM4 153 aa15.28■□□□□ 0.04
PTCD3-202ENST00000409326 VSIRQ9H7M9 311 aa15.28■□□□□ 0.04
PTCD3-202ENST00000409326 IGSF23A1L1A6 192 aa15.27■□□□□ 0.04
PTCD3-202ENST00000409326 E5RGE8 158 aa15.27■□□□□ 0.04
PTCD3-202ENST00000409326 H0YIZ8 118 aa15.27■□□□□ 0.04
PTCD3-202ENST00000409326 APOHP02749 345 aaPredicted RBP15.27■□□□□ 0.04
PTCD3-202ENST00000409326 SULT1A1P50225 295 aa15.27■□□□□ 0.04
PTCD3-202ENST00000409326 FCN2Q15485 313 aa15.27■□□□□ 0.04
PTCD3-202ENST00000409326 USF2Q15853 346 aaPredicted RBP15.27■□□□□ 0.04
PTCD3-202ENST00000409326 GUCA2BQ16661 112 aa15.27■□□□□ 0.04
PTCD3-202ENST00000409326 LAMTOR1Q6IAA8 161 aa15.27■□□□□ 0.04
PTCD3-202ENST00000409326 RBPMS2Q6ZRY4 209 aaKnown RBP15.27■□□□□ 0.04
PTCD3-202ENST00000409326 OR11H7Q8NGC8 314 aa15.27■□□□□ 0.04
PTCD3-202ENST00000409326 ST8SIA2Q92186 375 aa15.27■□□□□ 0.04
PTCD3-202ENST00000409326 RNF2Q99496 336 aa15.27■□□□□ 0.04
PTCD3-202ENST00000409326 NPVFQ9HCQ7 196 aa15.27■□□□□ 0.04
PTCD3-202ENST00000409326 OR5AC2Q9NZP5 309 aa15.27■□□□□ 0.04
PTCD3-202ENST00000409326 LSM4Q9Y4Z0 139 aaKnown RBP15.27■□□□□ 0.04
PTCD3-202ENST00000409326 IGHV3OR16-13A0A075B7E8 117 aa15.26■□□□□ 0.03
PTCD3-202ENST00000409326 IGHV3-74A0A0B4J1X5 117 aa15.26■□□□□ 0.03
PTCD3-202ENST00000409326 CST7O76096 145 aa15.26■□□□□ 0.03
PTCD3-202ENST00000409326 MPC2O95563 127 aa15.26■□□□□ 0.03
PTCD3-202ENST00000409326 PET100P0DJ07 73 aa15.26■□□□□ 0.03
PTCD3-202ENST00000409326 SLC38A11Q08AI6 406 aa15.26■□□□□ 0.03
PTCD3-202ENST00000409326 GTSCR1Q86UQ5 136 aa15.26■□□□□ 0.03
PTCD3-202ENST00000409326 STX12Q86Y82 276 aa15.26■□□□□ 0.03
PTCD3-202ENST00000409326 RNF125Q96EQ8 232 aa15.26■□□□□ 0.03
PTCD3-202ENST00000409326 TMEM231Q9H6L2 316 aa15.26■□□□□ 0.03
PTCD3-202ENST00000409326 A0A1W2PS18 150 aa15.25■□□□□ 0.03
PTCD3-202ENST00000409326 TSPAN4O14817 238 aa15.25■□□□□ 0.03
PTCD3-202ENST00000409326 HNRNPCP07910 306 aaKnown RBP eCLIP15.25■□□□□ 0.03
PTCD3-202ENST00000409326 P2RY1P47900 373 aa15.25■□□□□ 0.03
PTCD3-202ENST00000409326 DEFB121Q5J5C9 76 aa15.25■□□□□ 0.03
PTCD3-202ENST00000409326 TMEM217Q8N7C4 229 aa15.25■□□□□ 0.03
PTCD3-202ENST00000409326 NARS2Q96I59 477 aaKnown RBP15.25■□□□□ 0.03
PTCD3-202ENST00000409326 SPAG8Q99932 426 aaPredicted RBP15.25■□□□□ 0.03
PTCD3-202ENST00000409326 U3KQE9 123 aa15.25■□□□□ 0.03
PTCD3-202ENST00000409326 CFDP00746 253 aaPredicted RBP15.24■□□□□ 0.03
PTCD3-202ENST00000409326 CD5P06127 495 aa15.24■□□□□ 0.03
PTCD3-202ENST00000409326 OR2F1Q13607 317 aa15.24■□□□□ 0.03
PTCD3-202ENST00000409326 FAM90A2PQ658T7 463 aa15.24■□□□□ 0.03
PTCD3-202ENST00000409326 TEPPQ6URK8 271 aa15.24■□□□□ 0.03
PTCD3-202ENST00000409326 Q8N1Y9 231 aa15.24■□□□□ 0.03
PTCD3-202ENST00000409326 RNF126Q9BV68 326 aa15.24■□□□□ 0.03
PTCD3-202ENST00000409326 SLC25A31Q9H0C2 315 aa15.24■□□□□ 0.03
PTCD3-202ENST00000409326 RABAC1Q9UI14 185 aa15.24■□□□□ 0.03
PTCD3-202ENST00000409326 IGHV3-66A0A0C4DH42 116 aa15.23■□□□□ 0.03
PTCD3-202ENST00000409326 S100A11P31949 105 aa15.23■□□□□ 0.03
PTCD3-202ENST00000409326 LYZP61626 148 aa15.23■□□□□ 0.03
PTCD3-202ENST00000409326 HBG1P69891 147 aa15.23■□□□□ 0.03
PTCD3-202ENST00000409326 HBG2P69892 147 aa15.23■□□□□ 0.03
PTCD3-202ENST00000409326 CYP2G1PQ6ZSU1 146 aa15.23■□□□□ 0.03
PTCD3-202ENST00000409326 LILRB2Q8N423 598 aa15.23■□□□□ 0.03
PTCD3-202ENST00000409326 PBDC1Q9BVG4 233 aa15.23■□□□□ 0.03
PTCD3-202ENST00000409326 SMAD5-AS1Q9Y6J3 95 aa15.23■□□□□ 0.03
PTCD3-202ENST00000409326 CD81P60033 236 aa15.22■□□□□ 0.03
PTCD3-202ENST00000409326 EWSR1Q01844 656 aaKnown RBP eCLIP15.22■□□□□ 0.03
PTCD3-202ENST00000409326 VWC2Q2TAL6 325 aa15.22■□□□□ 0.03
PTCD3-202ENST00000409326 TMEM182Q6ZP80 229 aaPredicted RBP15.22■□□□□ 0.03
PTCD3-202ENST00000409326 TCF24Q7RTU0 167 aa15.22■□□□□ 0.03
PTCD3-202ENST00000409326 BPIFCQ8NFQ6 507 aa15.22■□□□□ 0.03
PTCD3-202ENST00000409326 ASB13Q8WXK3 278 aa15.22■□□□□ 0.03
PTCD3-202ENST00000409326 GRAMD2BQ96HH9 432 aa15.22■□□□□ 0.03
PTCD3-202ENST00000409326 NEURL2Q9BR09 285 aa15.22■□□□□ 0.03
PTCD3-202ENST00000409326 DFFBO76075 338 aa15.21■□□□□ 0.03
PTCD3-202ENST00000409326 CD7P09564 240 aa15.21■□□□□ 0.03
PTCD3-202ENST00000409326 GATA2P23769 480 aaPredicted RBP15.21■□□□□ 0.03
PTCD3-202ENST00000409326 NUP62P37198 522 aaPredicted RBP15.21■□□□□ 0.03
PTCD3-202ENST00000409326 EIF2B2P49770 351 aaKnown RBP15.21■□□□□ 0.03
PTCD3-202ENST00000409326 SELENOTP62341 195 aa15.21■□□□□ 0.03
PTCD3-202ENST00000409326 BAXQ07812 192 aa15.21■□□□□ 0.03
PTCD3-202ENST00000409326 TMEM147Q9BVK8 224 aa15.21■□□□□ 0.03
PTCD3-202ENST00000409326 UQCC1Q9NVA1 299 aa15.21■□□□□ 0.03
PTCD3-202ENST00000409326 MBD2Q9UBB5 411 aa15.21■□□□□ 0.03
PTCD3-202ENST00000409326 GIPP09681 153 aaPredicted RBP15.2■□□□□ 0.02
PTCD3-202ENST00000409326 NHLH2Q02577 135 aa15.2■□□□□ 0.02
PTCD3-202ENST00000409326 ATP6V1FQ16864 119 aa15.2■□□□□ 0.02
PTCD3-202ENST00000409326 C16orf54Q6UWD8 224 aa15.2■□□□□ 0.02
PTCD3-202ENST00000409326 PFDN2Q9UHV9 154 aa15.2■□□□□ 0.02
PTCD3-202ENST00000409326 OR4C46A6NHA9 309 aa15.19■□□□□ 0.02
PTCD3-202ENST00000409326 BUB3O43684 328 aa15.19■□□□□ 0.02
PTCD3-202ENST00000409326 LYL1P12980 280 aa15.19■□□□□ 0.02
PTCD3-202ENST00000409326 GLMPQ8WWB7 406 aa15.19■□□□□ 0.02
PTCD3-202ENST00000409326 MGST2Q99735 147 aa15.19■□□□□ 0.02
PTCD3-202ENST00000409326 SLC45A2Q9UMX9 530 aa15.19■□□□□ 0.02
PTCD3-202ENST00000409326 WDR83OSQ9Y284 106 aa15.19■□□□□ 0.02
PTCD3-202ENST00000409326 DNAH9Q9NYC9 4486 aa15.19■□□□□ 0.02
PTCD3-202ENST00000409326 IGKV3-7A0A075B6H7 116 aa15.18■□□□□ 0.02
PTCD3-202ENST00000409326 UBE2L5PA0A1B0GUS4 154 aa15.18■□□□□ 0.02
PTCD3-202ENST00000409326 AGPAT2O15120 278 aa15.18■□□□□ 0.02
PTCD3-202ENST00000409326 IGHV4-30-4P0DP06 118 aa15.18■□□□□ 0.02
PTCD3-202ENST00000409326 ZNF546Q86UE3 836 aa15.18■□□□□ 0.02
PTCD3-202ENST00000409326 OR5C1Q8NGR4 320 aa15.18■□□□□ 0.02
PTCD3-202ENST00000409326 THAP6Q8TBB0 222 aa15.18■□□□□ 0.02
PTCD3-202ENST00000409326 HELTA6NFD8 242 aa15.17■□□□□ 0.02
PTCD3-202ENST00000409326 A8MZ25 164 aa15.17■□□□□ 0.02
PTCD3-202ENST00000409326 LINC00869P0C866 280 aa15.17■□□□□ 0.02
PTCD3-202ENST00000409326 PLP1P60201 277 aa15.17■□□□□ 0.02
PTCD3-202ENST00000409326 RPL11P62913 178 aaKnown RBP15.17■□□□□ 0.02
PTCD3-202ENST00000409326 PAFAH1B2P68402 229 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms