RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 CYP2G1PQ6ZSU1 146 aa15.7■□□□□ 0.1
VSX1-203ENST00000409285 GGTLC1Q9BX51 225 aa15.7■□□□□ 0.1
VSX1-203ENST00000409285 BORCS7-ASMTA0A0B4J1R7 106 aa15.69■□□□□ 0.1
VSX1-203ENST00000409285 C4BPBP20851 252 aa15.69■□□□□ 0.1
VSX1-203ENST00000409285 KLF5Q13887 457 aaPredicted RBP15.69■□□□□ 0.1
VSX1-203ENST00000409285 RPL7L1Q6DKI1 246 aaKnown RBP15.69■□□□□ 0.1
VSX1-203ENST00000409285 REC114Q7Z4M0 266 aa15.69■□□□□ 0.1
VSX1-203ENST00000409285 ZFAND3Q9H8U3 227 aa15.69■□□□□ 0.1
VSX1-203ENST00000409285 KCNIP2Q9NS61 270 aa15.69■□□□□ 0.1
VSX1-203ENST00000409285 SLC45A2Q9UMX9 530 aa15.69■□□□□ 0.1
VSX1-203ENST00000409285 PKD1L1Q8TDX9 2849 aa15.68■□□□□ 0.1
VSX1-203ENST00000409285 LGALS9O00182 355 aa15.68■□□□□ 0.1
VSX1-203ENST00000409285 RD3LP0DJH9 198 aa15.68■□□□□ 0.1
VSX1-203ENST00000409285 PSG1P11464 419 aa15.68■□□□□ 0.1
VSX1-203ENST00000409285 RPL29P47914 159 aaKnown RBP15.68■□□□□ 0.1
VSX1-203ENST00000409285 C1QL4Q86Z23 238 aa15.68■□□□□ 0.1
VSX1-203ENST00000409285 OR51G1Q8NGK1 321 aa15.68■□□□□ 0.1
VSX1-203ENST00000409285 SCGB1C1Q8TD33 95 aa15.68■□□□□ 0.1
VSX1-203ENST00000409285 Q8WTZ3 238 aa15.68■□□□□ 0.1
VSX1-203ENST00000409285 TMEM190Q8WZ59 177 aa15.68■□□□□ 0.1
VSX1-203ENST00000409285 ARV1Q9H2C2 271 aa15.68■□□□□ 0.1
VSX1-203ENST00000409285 A8MWP6 167 aa15.67■□□□□ 0.1
VSX1-203ENST00000409285 PRR20EP86478 221 aa15.67■□□□□ 0.1
VSX1-203ENST00000409285 PRR20CP86479 221 aa15.67■□□□□ 0.1
VSX1-203ENST00000409285 PRR20DP86480 221 aa15.67■□□□□ 0.1
VSX1-203ENST00000409285 PRR20BP86481 221 aa15.67■□□□□ 0.1
VSX1-203ENST00000409285 PRR20AP86496 221 aa15.67■□□□□ 0.1
VSX1-203ENST00000409285 FAM106AQ4KMX7 169 aa15.67■□□□□ 0.1
VSX1-203ENST00000409285 DUX3Q96PT4 197 aa15.67■□□□□ 0.1
VSX1-203ENST00000409285 TIMM9Q9Y5J7 89 aa15.67■□□□□ 0.1
VSX1-203ENST00000409285 PUS1Q9Y606 427 aaKnown RBP eCLIP15.67■□□□□ 0.1
VSX1-203ENST00000409285 M0QZ24 198 aa15.66■□□□□ 0.1
VSX1-203ENST00000409285 SLURP1P55000 103 aa15.66■□□□□ 0.1
VSX1-203ENST00000409285 PLP1P60201 277 aa15.66■□□□□ 0.1
VSX1-203ENST00000409285 TOMM20LQ6UXN7 152 aa15.66■□□□□ 0.1
VSX1-203ENST00000409285 BPIFCQ8NFQ6 507 aa15.66■□□□□ 0.1
VSX1-203ENST00000409285 STOML3Q8TAV4 291 aa15.66■□□□□ 0.1
VSX1-203ENST00000409285 PSMG3Q9BT73 122 aaPredicted RBP15.66■□□□□ 0.1
VSX1-203ENST00000409285 WI2-2373I1.2A0A1W2PRP0 233 aa15.65■□□□□ 0.1
VSX1-203ENST00000409285 C17orf112F2Z3M2 114 aa15.65■□□□□ 0.1
VSX1-203ENST00000409285 PXDC1Q5TGL8 231 aa15.65■□□□□ 0.1
VSX1-203ENST00000409285 UNQ9165/PRO28630Q6UXU0 137 aa15.65■□□□□ 0.1
VSX1-203ENST00000409285 TMEM182Q6ZP80 229 aaPredicted RBP15.65■□□□□ 0.1
VSX1-203ENST00000409285 ZNF709Q8N972 641 aa15.65■□□□□ 0.1
VSX1-203ENST00000409285 GNPNAT1Q96EK6 184 aaPredicted RBP15.65■□□□□ 0.1
VSX1-203ENST00000409285 RNF125Q96EQ8 232 aa15.65■□□□□ 0.1
VSX1-203ENST00000409285 GINS3Q9BRX5 216 aa15.65■□□□□ 0.1
VSX1-203ENST00000409285 IGHV3-35A0A0C4DH35 117 aa15.65■□□□□ 0.1
VSX1-203ENST00000409285 ELLP55199 621 aaPredicted RBP15.65■□□□□ 0.1
VSX1-203ENST00000409285 EIF5AP63241 154 aaKnown RBP15.65■□□□□ 0.1
VSX1-203ENST00000409285 STPG3Q8N7X2 389 aa15.65■□□□□ 0.1
VSX1-203ENST00000409285 RCC1LQ96I51 464 aaKnown RBP15.65■□□□□ 0.1
VSX1-203ENST00000409285 ZNF471Q9BX82 626 aaPredicted RBP15.65■□□□□ 0.1
VSX1-203ENST00000409285 PXMP4Q9Y6I8 212 aa15.65■□□□□ 0.1
VSX1-203ENST00000409285 K7EMT4 169 aa15.64■□□□□ 0.09
VSX1-203ENST00000409285 PF4P02776 101 aa15.64■□□□□ 0.09
VSX1-203ENST00000409285 IL4P05112 153 aa15.64■□□□□ 0.09
VSX1-203ENST00000409285 LINC00869P0C866 280 aa15.64■□□□□ 0.09
VSX1-203ENST00000409285 LINC00482Q8N8I6 264 aa15.64■□□□□ 0.09
VSX1-203ENST00000409285 HSD17B11Q8NBQ5 300 aa15.64■□□□□ 0.09
VSX1-203ENST00000409285 OR2G3Q8NGZ4 309 aa15.64■□□□□ 0.09
VSX1-203ENST00000409285 DLX4Q92988 240 aaPredicted RBP15.64■□□□□ 0.09
VSX1-203ENST00000409285 RSG1Q9BU20 258 aa15.64■□□□□ 0.09
VSX1-203ENST00000409285 GATA2P23769 480 aaPredicted RBP15.63■□□□□ 0.09
VSX1-203ENST00000409285 ATP6V0CP27449 155 aa15.63■□□□□ 0.09
VSX1-203ENST00000409285 SYNJ2BPP57105 145 aa15.63■□□□□ 0.09
VSX1-203ENST00000409285 B2MP61769 119 aa15.63■□□□□ 0.09
VSX1-203ENST00000409285 MIC13Q5XKP0 118 aa15.63■□□□□ 0.09
VSX1-203ENST00000409285 SLC51BQ86UW2 128 aa15.63■□□□□ 0.09
VSX1-203ENST00000409285 DAZ1Q9NQZ3 744 aaKnown RBP15.63■□□□□ 0.09
VSX1-203ENST00000409285 SLC39A9Q9NUM3 307 aa15.63■□□□□ 0.09
VSX1-203ENST00000409285 UFC1Q9Y3C8 167 aa15.63■□□□□ 0.09
VSX1-203ENST00000409285 YIF1AO95070 293 aa15.62■□□□□ 0.09
VSX1-203ENST00000409285 TPT1P13693 172 aaKnown RBP15.62■□□□□ 0.09
VSX1-203ENST00000409285 USF2Q15853 346 aaPredicted RBP15.62■□□□□ 0.09
VSX1-203ENST00000409285 TSPAN15O95858 294 aa15.61■□□□□ 0.09
VSX1-203ENST00000409285 SPP1P10451 314 aa15.61■□□□□ 0.09
VSX1-203ENST00000409285 SERF2P84101 59 aa15.61■□□□□ 0.09
VSX1-203ENST00000409285 Q6ZRG5 221 aa15.61■□□□□ 0.09
VSX1-203ENST00000409285 BAP18Q8IXM2 172 aa15.61■□□□□ 0.09
VSX1-203ENST00000409285 OR9G4Q8NGQ1 327 aa15.61■□□□□ 0.09
VSX1-203ENST00000409285 PEMTQ9UBM1 199 aa15.61■□□□□ 0.09
VSX1-203ENST00000409285 ZNF320A2RRD8 509 aa15.6■□□□□ 0.09
VSX1-203ENST00000409285 TMEM213A2RRL7 107 aa15.6■□□□□ 0.09
VSX1-203ENST00000409285 OVOL1O14753 267 aa15.6■□□□□ 0.09
VSX1-203ENST00000409285 MRPL27Q9P0M9 148 aaKnown RBP15.6■□□□□ 0.09
VSX1-203ENST00000409285 CMYA5Q8N3K9 4069 aa15.6■□□□□ 0.09
VSX1-203ENST00000409285 ELOA3CA0A087WX78 387 aaPredicted RBP15.59■□□□□ 0.09
VSX1-203ENST00000409285 CRYBB3P26998 211 aa15.59■□□□□ 0.09
VSX1-203ENST00000409285 LYZP61626 148 aa15.59■□□□□ 0.09
VSX1-203ENST00000409285 MARC2Q969Z3 335 aa15.59■□□□□ 0.09
VSX1-203ENST00000409285 PFDN5Q99471 154 aa15.59■□□□□ 0.09
VSX1-203ENST00000409285 C20orf24Q9BUV8 137 aa15.59■□□□□ 0.09
VSX1-203ENST00000409285 SH3BGRL3Q9H299 93 aa15.59■□□□□ 0.09
VSX1-203ENST00000409285 RABAC1Q9UI14 185 aa15.59■□□□□ 0.09
VSX1-203ENST00000409285 HYPMO75409 117 aa15.59■□□□□ 0.09
VSX1-203ENST00000409285 SEC11BP0C7V7 166 aa15.59■□□□□ 0.09
VSX1-203ENST00000409285 C8orf88P0DMB2 117 aa15.59■□□□□ 0.09
VSX1-203ENST00000409285 OR1L4Q8NGR5 311 aa15.59■□□□□ 0.09
VSX1-203ENST00000409285 METTL26Q96S19 204 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms