RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 IGKV1-6A0A0C4DH72 117 aa14.58□□□□□ -0.08
SMPD4-202ENST00000409031 PLA2G2EQ9NZK7 142 aa14.58□□□□□ -0.08
SMPD4-202ENST00000409031 DNAL4O96015 105 aa14.58□□□□□ -0.08
SMPD4-202ENST00000409031 ZNF138P52744 262 aa14.58□□□□□ -0.08
SMPD4-202ENST00000409031 IGLV3-19P01714 112 aa14.58□□□□□ -0.08
SMPD4-202ENST00000409031 BVES-AS1Q5T3Y7 98 aa14.58□□□□□ -0.08
SMPD4-202ENST00000409031 PVRIGQ6DKI7 326 aa14.58□□□□□ -0.08
SMPD4-202ENST00000409031 C1orf162Q8NEQ5 155 aaPredicted RBP14.58□□□□□ -0.08
SMPD4-202ENST00000409031 LOC102723996A0A087X1L8 192 aa14.57□□□□□ -0.08
SMPD4-202ENST00000409031 TRAV8-4A0A0B4J246 113 aa14.57□□□□□ -0.08
SMPD4-202ENST00000409031 F2Z2F3 143 aa14.57□□□□□ -0.08
SMPD4-202ENST00000409031 PSPNO60542 156 aa14.57□□□□□ -0.08
SMPD4-202ENST00000409031 NPPCP23582 126 aa14.57□□□□□ -0.08
SMPD4-202ENST00000409031 SAP25Q8TEE9 199 aa14.57□□□□□ -0.08
SMPD4-202ENST00000409031 MCRIP2Q9BUT9 160 aaKnown RBP14.57□□□□□ -0.08
SMPD4-202ENST00000409031 SCRT1Q9BWW7 348 aa14.57□□□□□ -0.08
SMPD4-202ENST00000409031 GFRA4Q9GZZ7 299 aa14.57□□□□□ -0.08
SMPD4-202ENST00000409031 TMEM238C9JI98 176 aa14.57□□□□□ -0.08
SMPD4-202ENST00000409031 HTN1P15515 57 aa14.57□□□□□ -0.08
SMPD4-202ENST00000409031 GEMIN7Q9H840 131 aaKnown RBP14.57□□□□□ -0.08
SMPD4-202ENST00000409031 IGLC7A0M8Q6 106 aa14.57□□□□□ -0.08
SMPD4-202ENST00000409031 RNASE8Q8TDE3 154 aaKnown RBP14.57□□□□□ -0.08
SMPD4-202ENST00000409031 MLNRO43193 412 aa14.57□□□□□ -0.08
SMPD4-202ENST00000409031 COX8AP10176 69 aa14.57□□□□□ -0.08
SMPD4-202ENST00000409031 PRR7Q8TB68 274 aa14.57□□□□□ -0.08
SMPD4-202ENST00000409031 FAM216BQ8N7L0 139 aa14.56□□□□□ -0.08
SMPD4-202ENST00000409031 ZNF114Q8NC26 417 aa14.56□□□□□ -0.08
SMPD4-202ENST00000409031 ATP6V0BQ99437 205 aa14.56□□□□□ -0.08
SMPD4-202ENST00000409031 CHAC1Q9BUX1 264 aa14.56□□□□□ -0.08
SMPD4-202ENST00000409031 CHTOPQ9Y3Y2 248 aaKnown RBP14.56□□□□□ -0.08
SMPD4-202ENST00000409031 TSSC4Q9Y5U2 329 aaPredicted RBP14.56□□□□□ -0.08
SMPD4-202ENST00000409031 HEATR5AQ86XA9 2040 aa14.56□□□□□ -0.08
SMPD4-202ENST00000409031 SH2D7A6NKC9 451 aaPredicted RBP14.56□□□□□ -0.08
SMPD4-202ENST00000409031 CELA3AP09093 270 aa14.56□□□□□ -0.08
SMPD4-202ENST00000409031 ASIPP42127 132 aa14.56□□□□□ -0.08
SMPD4-202ENST00000409031 PMS2CLQ68D20 193 aa14.56□□□□□ -0.08
SMPD4-202ENST00000409031 FBXL15Q9H469 300 aa14.56□□□□□ -0.08
SMPD4-202ENST00000409031 CEP250Q9BV73 2442 aa14.56□□□□□ -0.08
SMPD4-202ENST00000409031 FAM106CPP0CH98 169 aa14.56□□□□□ -0.08
SMPD4-202ENST00000409031 LHX2P50458 406 aa14.56□□□□□ -0.08
SMPD4-202ENST00000409031 Q6P435 159 aa14.56□□□□□ -0.08
SMPD4-202ENST00000409031 ARPC1AQ92747 370 aa14.56□□□□□ -0.08
SMPD4-202ENST00000409031 CYYR1Q96J86 154 aa14.56□□□□□ -0.08
SMPD4-202ENST00000409031 LINC00473A8K010 186 aa14.55□□□□□ -0.08
SMPD4-202ENST00000409031 ZC2HC1BQ5TFG8 222 aa14.55□□□□□ -0.08
SMPD4-202ENST00000409031 IGKV3D-15A0A087WSY6 115 aa14.55□□□□□ -0.08
SMPD4-202ENST00000409031 C21orf62Q9NYP8 219 aa14.55□□□□□ -0.08
SMPD4-202ENST00000409031 APC2O95996 2303 aa14.55□□□□□ -0.08
SMPD4-202ENST00000409031 WDR81Q562E7 1941 aa14.55□□□□□ -0.08
SMPD4-202ENST00000409031 PRR19A6NJB7 356 aa14.55□□□□□ -0.08
SMPD4-202ENST00000409031 IL18BPO95998 194 aa14.55□□□□□ -0.08
SMPD4-202ENST00000409031 MRAP2Q96G30 205 aa14.55□□□□□ -0.08
SMPD4-202ENST00000409031 LINC01549A6NIU2 74 aa14.55□□□□□ -0.08
SMPD4-202ENST00000409031 E9PLN8 166 aa14.55□□□□□ -0.08
SMPD4-202ENST00000409031 CD300EQ496F6 205 aaPredicted RBP14.55□□□□□ -0.08
SMPD4-202ENST00000409031 RNFT1Q5M7Z0 435 aa14.55□□□□□ -0.08
SMPD4-202ENST00000409031 C20orf204Q6ZNR8 217 aa14.55□□□□□ -0.08
SMPD4-202ENST00000409031 C11orf52Q96A22 123 aa14.55□□□□□ -0.08
SMPD4-202ENST00000409031 RNF125Q96EQ8 232 aa14.54□□□□□ -0.08
SMPD4-202ENST00000409031 CT83Q5H943 113 aa14.54□□□□□ -0.08
SMPD4-202ENST00000409031 F8W1H4 67 aa14.54□□□□□ -0.08
SMPD4-202ENST00000409031 CELA3BP08861 270 aa14.54□□□□□ -0.08
SMPD4-202ENST00000409031 SLAQ13239 276 aa14.54□□□□□ -0.08
SMPD4-202ENST00000409031 FAM231DQ6ZW35 169 aa14.54□□□□□ -0.08
SMPD4-202ENST00000409031 TRAV3A0A0B4J244 114 aa14.54□□□□□ -0.08
SMPD4-202ENST00000409031 TOMM40O96008 361 aa14.54□□□□□ -0.08
SMPD4-202ENST00000409031 C19orf54Q5BKX5 351 aa14.54□□□□□ -0.08
SMPD4-202ENST00000409031 PLNP26678 52 aa14.53□□□□□ -0.08
SMPD4-202ENST00000409031 FAM201AQ5SY85 155 aa14.53□□□□□ -0.08
SMPD4-202ENST00000409031 EBLN2Q6P2I7 272 aa14.53□□□□□ -0.08
SMPD4-202ENST00000409031 FAM159AQ6UWV7 190 aa14.53□□□□□ -0.08
SMPD4-202ENST00000409031 ZSWIM8A7E2V4 1837 aa14.53□□□□□ -0.08
SMPD4-202ENST00000409031 PRR31Q5SQ13 230 aa14.53□□□□□ -0.08
SMPD4-202ENST00000409031 DEFB125Q8N687 156 aa14.53□□□□□ -0.08
SMPD4-202ENST00000409031 CSTL1Q9H114 145 aa14.53□□□□□ -0.08
SMPD4-202ENST00000409031 SCN5AQ14524 2016 aa14.53□□□□□ -0.08
SMPD4-202ENST00000409031 MEIG1Q5JSS6 88 aa14.53□□□□□ -0.08
SMPD4-202ENST00000409031 ERG28Q9UKR5 140 aa14.53□□□□□ -0.08
SMPD4-202ENST00000409031 PLXNA3P51805 1871 aa14.53□□□□□ -0.08
SMPD4-202ENST00000409031 TRPM7Q96QT4 1865 aa14.53□□□□□ -0.08
SMPD4-202ENST00000409031 ZNF56Q15929 161 aa14.53□□□□□ -0.08
SMPD4-202ENST00000409031 SPACA3Q8IXA5 215 aa14.53□□□□□ -0.08
SMPD4-202ENST00000409031 IGHV3-35A0A0C4DH35 117 aa14.52□□□□□ -0.08
SMPD4-202ENST00000409031 PATE3B3GLJ2 98 aa14.52□□□□□ -0.08
SMPD4-202ENST00000409031 HAPLN4Q86UW8 402 aa14.52□□□□□ -0.08
SMPD4-202ENST00000409031 MBNL3Q9NUK0 354 aaKnown RBP14.52□□□□□ -0.08
SMPD4-202ENST00000409031 AKAP6Q13023 2319 aa14.52□□□□□ -0.08
SMPD4-202ENST00000409031 SMIM27A0A1W2PRY6 76 aa14.52□□□□□ -0.08
SMPD4-202ENST00000409031 LAGE3Q14657 143 aa14.52□□□□□ -0.08
SMPD4-202ENST00000409031 ETDBQ3ZM63 59 aa14.52□□□□□ -0.08
SMPD4-202ENST00000409031 FAM74A4Q5TZK3 123 aa14.52□□□□□ -0.08
SMPD4-202ENST00000409031 LYZL1Q6UWQ5 148 aa14.52□□□□□ -0.08
SMPD4-202ENST00000409031 RNF166Q96A37 237 aaPredicted RBP14.52□□□□□ -0.08
SMPD4-202ENST00000409031 LINC00479Q96M42 142 aa14.52□□□□□ -0.08
SMPD4-202ENST00000409031 SHANK1Q9Y566 2161 aa14.52□□□□□ -0.08
SMPD4-202ENST00000409031 GAGE12HA6NDE8 117 aa14.52□□□□□ -0.09
SMPD4-202ENST00000409031 JMJD8Q96S16 334 aa14.52□□□□□ -0.09
SMPD4-202ENST00000409031 SLC25A39Q9BZJ4 359 aaPredicted RBP14.52□□□□□ -0.09
SMPD4-202ENST00000409031 IGKV1-39P01597 117 aa14.51□□□□□ -0.09
SMPD4-202ENST00000409031 IGKV1D-39P04432 117 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms