RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 ZNF79Q15937 498 aa6.69□□□□□ -1.34
SNORD88A-201ENST00000408314 MLANAQ16655 118 aa6.69□□□□□ -1.34
SNORD88A-201ENST00000408314 C16orf54Q6UWD8 224 aa6.69□□□□□ -1.34
SNORD88A-201ENST00000408314 COQ8AQ8NI60 647 aa6.69□□□□□ -1.34
SNORD88A-201ENST00000408314 RNF125Q96EQ8 232 aa6.69□□□□□ -1.34
SNORD88A-201ENST00000408314 C7orf50Q9BRJ6 194 aaKnown RBP6.69□□□□□ -1.34
SNORD88A-201ENST00000408314 C1QTNF4Q9BXJ3 329 aa6.69□□□□□ -1.34
SNORD88A-201ENST00000408314 NRN1Q9NPD7 142 aa6.69□□□□□ -1.34
SNORD88A-201ENST00000408314 U3KQE9 123 aa6.69□□□□□ -1.34
SNORD88A-201ENST00000408314 WRBO00258 174 aa6.68□□□□□ -1.34
SNORD88A-201ENST00000408314 IFNA21P01568 189 aa6.68□□□□□ -1.34
SNORD88A-201ENST00000408314 ZNF688P0C7X2 276 aa6.68□□□□□ -1.34
SNORD88A-201ENST00000408314 C1orf194Q5T5A4 169 aa6.68□□□□□ -1.34
SNORD88A-201ENST00000408314 LEMD1Q68G75 181 aa6.68□□□□□ -1.34
SNORD88A-201ENST00000408314 SIGLEC15Q6ZMC9 328 aa6.68□□□□□ -1.34
SNORD88A-201ENST00000408314 S100A7AQ86SG5 101 aa6.68□□□□□ -1.34
SNORD88A-201ENST00000408314 OR11H2Q8NH07 326 aa6.68□□□□□ -1.34
SNORD88A-201ENST00000408314 TMEM170AQ8WVE7 144 aa6.68□□□□□ -1.34
SNORD88A-201ENST00000408314 GLMPQ8WWB7 406 aa6.68□□□□□ -1.34
SNORD88A-201ENST00000408314 PPP1R14BQ96C90 147 aa6.68□□□□□ -1.34
SNORD88A-201ENST00000408314 SRRQ9GZT4 340 aa6.68□□□□□ -1.34
SNORD88A-201ENST00000408314 RBM38Q9H0Z9 239 aaKnown RBP6.68□□□□□ -1.34
SNORD88A-201ENST00000408314 PRR13Q9NZ81 148 aa6.68□□□□□ -1.34
SNORD88A-201ENST00000408314 NDUFA13Q9P0J0 144 aa6.68□□□□□ -1.34
SNORD88A-201ENST00000408314 PAIP2BQ9ULR5 123 aaKnown RBP6.68□□□□□ -1.34
SNORD88A-201ENST00000408314 SNRPGP15A8MWD9 76 aa6.67□□□□□ -1.34
SNORD88A-201ENST00000408314 BUB3O43684 328 aa6.67□□□□□ -1.34
SNORD88A-201ENST00000408314 SYNGR2O43760 224 aa6.67□□□□□ -1.34
SNORD88A-201ENST00000408314 PITX3O75364 302 aa6.67□□□□□ -1.34
SNORD88A-201ENST00000408314 NDUFB6O95139 128 aa6.67□□□□□ -1.34
SNORD88A-201ENST00000408314 PSG1P11464 419 aa6.67□□□□□ -1.34
SNORD88A-201ENST00000408314 ID1P41134 155 aa6.67□□□□□ -1.34
SNORD88A-201ENST00000408314 PPP1R1AQ13522 171 aa6.67□□□□□ -1.34
SNORD88A-201ENST00000408314 GAMTQ14353 236 aa6.67□□□□□ -1.34
SNORD88A-201ENST00000408314 USF2Q15853 346 aaPredicted RBP6.67□□□□□ -1.34
SNORD88A-201ENST00000408314 ZNF124Q15973 351 aa6.67□□□□□ -1.34
SNORD88A-201ENST00000408314 GGNBP1Q5YKI7 109 aa6.67□□□□□ -1.34
SNORD88A-201ENST00000408314 CEMP1Q6PRD7 247 aaPredicted RBP6.67□□□□□ -1.34
SNORD88A-201ENST00000408314 TRPT1Q86TN4 253 aaKnown RBP6.67□□□□□ -1.34
SNORD88A-201ENST00000408314 LILRB2Q8N423 598 aa6.67□□□□□ -1.34
SNORD88A-201ENST00000408314 C11orf45Q8TAV5 145 aa6.67□□□□□ -1.34
SNORD88A-201ENST00000408314 DCANP1Q8TF63 244 aa6.67□□□□□ -1.34
SNORD88A-201ENST00000408314 TRGV9Q99603 122 aa6.67□□□□□ -1.34
SNORD88A-201ENST00000408314 PBDC1Q9BVG4 233 aa6.67□□□□□ -1.34
SNORD88A-201ENST00000408314 SLC45A2Q9UMX9 530 aa6.67□□□□□ -1.34
SNORD88A-201ENST00000408314 PLECQ15149 4684 aaKnown RBP6.66□□□□□ -1.34
SNORD88A-201ENST00000408314 HOXB5P09067 269 aa6.66□□□□□ -1.34
SNORD88A-201ENST00000408314 IAPPP10997 89 aa6.66□□□□□ -1.34
SNORD88A-201ENST00000408314 MIFP14174 115 aa6.66□□□□□ -1.34
SNORD88A-201ENST00000408314 MEOX2P50222 304 aa6.66□□□□□ -1.34
SNORD88A-201ENST00000408314 TCTAP57738 103 aa6.66□□□□□ -1.34
SNORD88A-201ENST00000408314 LYZP61626 148 aa6.66□□□□□ -1.34
SNORD88A-201ENST00000408314 PSMG4Q5JS54 123 aa6.66□□□□□ -1.34
SNORD88A-201ENST00000408314 ACTL10Q5JWF8 245 aa6.66□□□□□ -1.34
SNORD88A-201ENST00000408314 SPATA31B1PQ5VZV4 182 aa6.66□□□□□ -1.34
SNORD88A-201ENST00000408314 FAM24BQ8N5W8 94 aa6.66□□□□□ -1.34
SNORD88A-201ENST00000408314 BPIFCQ8NFQ6 507 aa6.66□□□□□ -1.34
SNORD88A-201ENST00000408314 RNF24Q9Y225 148 aa6.66□□□□□ -1.34
SNORD88A-201ENST00000408314 STRAPQ9Y3F4 350 aaKnown RBP6.66□□□□□ -1.34
SNORD88A-201ENST00000408314 CSMD3Q7Z407 3707 aa6.66□□□□□ -1.34
SNORD88A-201ENST00000408314 C11orf94C9JXX5 98 aa6.65□□□□□ -1.34
SNORD88A-201ENST00000408314 NKX2-1P43699 371 aaPredicted RBP6.65□□□□□ -1.34
SNORD88A-201ENST00000408314 GALR1P47211 349 aa6.65□□□□□ -1.34
SNORD88A-201ENST00000408314 PSMB3P49720 205 aa6.65□□□□□ -1.34
SNORD88A-201ENST00000408314 AKR1C1Q04828 323 aa6.65□□□□□ -1.34
SNORD88A-201ENST00000408314 C4orf46Q504U0 113 aa6.65□□□□□ -1.34
SNORD88A-201ENST00000408314 THAP8Q8NA92 274 aa6.65□□□□□ -1.34
SNORD88A-201ENST00000408314 PHLDA1Q8WV24 401 aaPredicted RBP6.65□□□□□ -1.34
SNORD88A-201ENST00000408314 LINC00476Q8WZB0 136 aa6.65□□□□□ -1.34
SNORD88A-201ENST00000408314 GPR82Q96P67 336 aa6.65□□□□□ -1.34
SNORD88A-201ENST00000408314 RAB40CQ96S21 281 aa6.65□□□□□ -1.34
SNORD88A-201ENST00000408314 HRH4Q9H3N8 390 aa6.65□□□□□ -1.34
SNORD88A-201ENST00000408314 ALMS1Q8TCU4 4167 aa6.65□□□□□ -1.35
SNORD88A-201ENST00000408314 C9orf170A2RU37 121 aa6.64□□□□□ -1.35
SNORD88A-201ENST00000408314 KNCNA6PVL3 124 aa6.64□□□□□ -1.35
SNORD88A-201ENST00000408314 OR4E1P0C645 316 aa6.64□□□□□ -1.35
SNORD88A-201ENST00000408314 SPANXN5Q5MJ07 72 aa6.64□□□□□ -1.35
SNORD88A-201ENST00000408314 OR8I2Q8N0Y5 310 aa6.64□□□□□ -1.35
SNORD88A-201ENST00000408314 TBC1D24Q9ULP9 559 aa6.64□□□□□ -1.35
SNORD88A-201ENST00000408314 DNAH1Q9P2D7 4330 aa6.64□□□□□ -1.35
SNORD88A-201ENST00000408314 IGKV1D-37A0A075B6S9 117 aa6.63□□□□□ -1.35
SNORD88A-201ENST00000408314 ZNF705EA8MWA4 302 aaPredicted RBP6.63□□□□□ -1.35
SNORD88A-201ENST00000408314 ISLRO14498 428 aa6.63□□□□□ -1.35
SNORD88A-201ENST00000408314 LY6G6CO95867 125 aa6.63□□□□□ -1.35
SNORD88A-201ENST00000408314 HLA-DRB4P13762 266 aa6.63□□□□□ -1.35
SNORD88A-201ENST00000408314 SELENOTP62341 195 aa6.63□□□□□ -1.35
SNORD88A-201ENST00000408314 ID3Q02535 119 aa6.63□□□□□ -1.35
SNORD88A-201ENST00000408314 ZNF90Q03938 601 aa6.63□□□□□ -1.35
SNORD88A-201ENST00000408314 ZNF846Q147U1 533 aa6.63□□□□□ -1.35
SNORD88A-201ENST00000408314 BAK1Q16611 211 aa6.63□□□□□ -1.35
SNORD88A-201ENST00000408314 FOXI2Q6ZQN5 318 aa6.63□□□□□ -1.35
SNORD88A-201ENST00000408314 OR4D5Q8NGN0 318 aa6.63□□□□□ -1.35
SNORD88A-201ENST00000408314 CLUHP3Q96NS8 147 aa6.63□□□□□ -1.35
SNORD88A-201ENST00000408314 LYSTQ99698 3801 aa6.63□□□□□ -1.35
SNORD88A-201ENST00000408314 TMEM147Q9BVK8 224 aa6.63□□□□□ -1.35
SNORD88A-201ENST00000408314 MAGT1Q9H0U3 335 aa6.63□□□□□ -1.35
SNORD88A-201ENST00000408314 MGAT4CQ9UBM8 478 aa6.63□□□□□ -1.35
SNORD88A-201ENST00000408314 HLA-DRB4X5D2U9 266 aa6.63□□□□□ -1.35
SNORD88A-201ENST00000408314 TEX48A0A1B0GUV7 120 aa6.62□□□□□ -1.35
SNORD88A-201ENST00000408314 SMCO3A2RU48 225 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms