RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 IZUMO1RA6ND01 250 aa13.24□□□□□ -0.29
COL23A1-202ENST00000407622 H3BTX0 84 aa13.24□□□□□ -0.29
COL23A1-202ENST00000407622 GPX1P07203 203 aa13.24□□□□□ -0.29
COL23A1-202ENST00000407622 GDF5OSQ5U4N7 250 aa13.24□□□□□ -0.29
COL23A1-202ENST00000407622 LEMD1Q68G75 181 aa13.24□□□□□ -0.29
COL23A1-202ENST00000407622 NUDT10Q8NFP7 164 aa13.24□□□□□ -0.29
COL23A1-202ENST00000407622 NUDT11Q96G61 164 aa13.24□□□□□ -0.29
COL23A1-202ENST00000407622 ATG101Q9BSB4 218 aa13.24□□□□□ -0.29
COL23A1-202ENST00000407622 CACNA1AO00555 2505 aa13.24□□□□□ -0.29
COL23A1-202ENST00000407622 LGALS7P47929 136 aa13.24□□□□□ -0.29
COL23A1-202ENST00000407622 RPH3ALQ9UNE2 315 aa13.24□□□□□ -0.29
COL23A1-202ENST00000407622 TBL2Q9Y4P3 447 aaKnown RBP13.24□□□□□ -0.29
COL23A1-202ENST00000407622 CRYGBP07316 175 aa13.23□□□□□ -0.29
COL23A1-202ENST00000407622 BRS3P32247 399 aa13.23□□□□□ -0.29
COL23A1-202ENST00000407622 RPL27AP46776 148 aaKnown RBP13.23□□□□□ -0.29
COL23A1-202ENST00000407622 Q8N976 141 aa13.23□□□□□ -0.29
COL23A1-202ENST00000407622 C7orf69Q9H7B7 122 aa13.23□□□□□ -0.29
COL23A1-202ENST00000407622 PAM16Q9Y3D7 125 aa13.23□□□□□ -0.29
COL23A1-202ENST00000407622 A0A1W2PS18 150 aa13.23□□□□□ -0.29
COL23A1-202ENST00000407622 VSTM5A8MXK1 200 aa13.23□□□□□ -0.29
COL23A1-202ENST00000407622 ZNF253O75346 499 aa13.23□□□□□ -0.29
COL23A1-202ENST00000407622 IGLV1-47P01700 117 aa13.23□□□□□ -0.29
COL23A1-202ENST00000407622 HLA-DQA1P01909 254 aa13.23□□□□□ -0.29
COL23A1-202ENST00000407622 PMCHP20382 165 aa13.23□□□□□ -0.29
COL23A1-202ENST00000407622 SIGLECL1Q8N7X8 197 aa13.23□□□□□ -0.29
COL23A1-202ENST00000407622 SIGLEC9Q9Y336 463 aa13.23□□□□□ -0.29
COL23A1-202ENST00000407622 ARHGAP32A7KAX9 2087 aa13.22□□□□□ -0.29
COL23A1-202ENST00000407622 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.22□□□□□ -0.29
COL23A1-202ENST00000407622 OR10J3Q5JRS4 329 aa13.22□□□□□ -0.29
COL23A1-202ENST00000407622 PVRIGQ6DKI7 326 aa13.22□□□□□ -0.29
COL23A1-202ENST00000407622 TEX45Q8NA69 505 aa13.22□□□□□ -0.29
COL23A1-202ENST00000407622 NUP35Q8NFH5 326 aa13.22□□□□□ -0.29
COL23A1-202ENST00000407622 KCNS1Q96KK3 526 aa13.22□□□□□ -0.29
COL23A1-202ENST00000407622 SPTA1P02549 2419 aa13.22□□□□□ -0.29
COL23A1-202ENST00000407622 ANKHD1Q8IWZ3 2542 aaKnown RBP13.22□□□□□ -0.29
COL23A1-202ENST00000407622 IGHV1-3A0A0C4DH29 117 aa13.22□□□□□ -0.29
COL23A1-202ENST00000407622 PGPA6NDG6 321 aa13.22□□□□□ -0.29
COL23A1-202ENST00000407622 VWC2LB2RUY7 222 aa13.22□□□□□ -0.29
COL23A1-202ENST00000407622 APCSP02743 223 aa13.22□□□□□ -0.29
COL23A1-202ENST00000407622 SLC25A5P05141 298 aaKnown RBP13.22□□□□□ -0.29
COL23A1-202ENST00000407622 AMTP48728 403 aa13.22□□□□□ -0.29
COL23A1-202ENST00000407622 KRTDAPP60985 99 aa13.22□□□□□ -0.29
COL23A1-202ENST00000407622 FAM231DQ6ZW35 169 aa13.22□□□□□ -0.29
COL23A1-202ENST00000407622 EPDR1Q9UM22 224 aa13.22□□□□□ -0.29
COL23A1-202ENST00000407622 COX7A1P24310 79 aa13.21□□□□□ -0.29
COL23A1-202ENST00000407622 APOBEC3AP31941 199 aaPredicted RBP13.21□□□□□ -0.29
COL23A1-202ENST00000407622 RPL19P84098 196 aaKnown RBP13.21□□□□□ -0.29
COL23A1-202ENST00000407622 LINC00322Q6ZN03 302 aaPredicted RBP13.21□□□□□ -0.29
COL23A1-202ENST00000407622 FAM19A2Q8N3H0 131 aa13.21□□□□□ -0.29
COL23A1-202ENST00000407622 LINC01560Q8TB33 94 aa13.21□□□□□ -0.29
COL23A1-202ENST00000407622 PERPQ96FX8 193 aa13.21□□□□□ -0.29
COL23A1-202ENST00000407622 TRGV9Q99603 122 aa13.21□□□□□ -0.29
COL23A1-202ENST00000407622 NRN1Q9NPD7 142 aa13.21□□□□□ -0.29
COL23A1-202ENST00000407622 RALYQ9UKM9 306 aaKnown RBP13.21□□□□□ -0.29
COL23A1-202ENST00000407622 NBASA2RRP1 2371 aa13.21□□□□□ -0.3
COL23A1-202ENST00000407622 TEX22C9J3V5 150 aa13.21□□□□□ -0.3
COL23A1-202ENST00000407622 KLRB1Q12918 225 aa13.21□□□□□ -0.3
COL23A1-202ENST00000407622 TMEM116Q8NCL8 245 aa13.21□□□□□ -0.3
COL23A1-202ENST00000407622 IGFBPL1Q8WX77 278 aa13.21□□□□□ -0.3
COL23A1-202ENST00000407622 TMEM68Q96MH6 324 aa13.21□□□□□ -0.3
COL23A1-202ENST00000407622 SSBP4Q9BWG4 385 aaPredicted RBP13.21□□□□□ -0.3
COL23A1-202ENST00000407622 FBXL15Q9H469 300 aa13.21□□□□□ -0.3
COL23A1-202ENST00000407622 PRORYQ9H606 182 aa13.21□□□□□ -0.3
COL23A1-202ENST00000407622 ZNF331Q9NQX6 463 aaPredicted RBP13.21□□□□□ -0.3
COL23A1-202ENST00000407622 BUB1B-PAK6H3BSN5 160 aa13.2□□□□□ -0.3
COL23A1-202ENST00000407622 GP9P14770 177 aa13.2□□□□□ -0.3
COL23A1-202ENST00000407622 GRNP28799 593 aaKnown RBP13.2□□□□□ -0.3
COL23A1-202ENST00000407622 NUTF2P61970 127 aaKnown RBP13.2□□□□□ -0.3
COL23A1-202ENST00000407622 TMEM183BQ1AE95 376 aa13.2□□□□□ -0.3
COL23A1-202ENST00000407622 COX19Q49B96 90 aa13.2□□□□□ -0.3
COL23A1-202ENST00000407622 ZNF705AQ6ZN79 300 aaPredicted RBP13.2□□□□□ -0.3
COL23A1-202ENST00000407622 GRAMD2BQ96HH9 432 aa13.2□□□□□ -0.3
COL23A1-202ENST00000407622 NEU1Q99519 415 aa13.2□□□□□ -0.3
COL23A1-202ENST00000407622 NGBQ9NPG2 151 aa13.2□□□□□ -0.3
COL23A1-202ENST00000407622 INSIG2Q9Y5U4 225 aa13.2□□□□□ -0.3
COL23A1-202ENST00000407622 NBEAP1P0C6P0 100 aa13.19□□□□□ -0.3
COL23A1-202ENST00000407622 RAB4AP20338 218 aa13.19□□□□□ -0.3
COL23A1-202ENST00000407622 UBE2G1P62253 170 aa13.19□□□□□ -0.3
COL23A1-202ENST00000407622 ETFRF1Q6IPR1 90 aa13.19□□□□□ -0.3
COL23A1-202ENST00000407622 HIGD1CA8MV81 97 aa13.19□□□□□ -0.3
COL23A1-202ENST00000407622 GPR6P46095 362 aaPredicted RBP13.19□□□□□ -0.3
COL23A1-202ENST00000407622 ZNF124Q15973 351 aa13.19□□□□□ -0.3
COL23A1-202ENST00000407622 Q71RC1 249 aaPredicted RBP13.19□□□□□ -0.3
COL23A1-202ENST00000407622 PPP1R27Q86WC6 154 aa13.19□□□□□ -0.3
COL23A1-202ENST00000407622 NIT1Q86X76 327 aa13.19□□□□□ -0.3
COL23A1-202ENST00000407622 C18orf32Q8TCD1 76 aa13.19□□□□□ -0.3
COL23A1-202ENST00000407622 TSKUQ8WUA8 353 aa13.19□□□□□ -0.3
COL23A1-202ENST00000407622 C20orf144Q9BQM9 153 aa13.19□□□□□ -0.3
COL23A1-202ENST00000407622 B9A039 149 aa13.18□□□□□ -0.3
COL23A1-202ENST00000407622 SIAH2O43255 324 aa13.18□□□□□ -0.3
COL23A1-202ENST00000407622 HYPMO75409 117 aa13.18□□□□□ -0.3
COL23A1-202ENST00000407622 ZNF324O75467 553 aaPredicted RBP13.18□□□□□ -0.3
COL23A1-202ENST00000407622 CD3EP07766 207 aa13.18□□□□□ -0.3
COL23A1-202ENST00000407622 CASP6P55212 293 aa13.18□□□□□ -0.3
COL23A1-202ENST00000407622 RBPJQ06330 500 aa13.18□□□□□ -0.3
COL23A1-202ENST00000407622 LDLRAD2Q5SZI1 272 aa13.18□□□□□ -0.3
COL23A1-202ENST00000407622 VAMP8Q9BV40 100 aa13.18□□□□□ -0.3
COL23A1-202ENST00000407622 ZNF586Q9NXT0 402 aa13.18□□□□□ -0.3
COL23A1-202ENST00000407622 F11RQ9Y624 299 aaKnown RBP13.18□□□□□ -0.3
COL23A1-202ENST00000407622 DIRC3C9JPN6 131 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms