RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 TMEM144Q7Z5S9 345 aa6.42□□□□□ -1.38
GPC3-203ENST00000406757 RNF152Q8N8N0 203 aa6.42□□□□□ -1.38
GPC3-203ENST00000406757 SCGB1C1Q8TD33 95 aa6.42□□□□□ -1.38
GPC3-203ENST00000406757 UBE2E2Q96LR5 201 aa6.42□□□□□ -1.38
GPC3-203ENST00000406757 RSG1Q9BU20 258 aa6.42□□□□□ -1.38
GPC3-203ENST00000406757 GGACTQ9BVM4 153 aa6.42□□□□□ -1.38
GPC3-203ENST00000406757 WDR61Q9GZS3 305 aaKnown RBP6.42□□□□□ -1.38
GPC3-203ENST00000406757 SH3BGRL3Q9H299 93 aa6.42□□□□□ -1.38
GPC3-203ENST00000406757 PEF1Q9UBV8 284 aaKnown RBP6.42□□□□□ -1.38
GPC3-203ENST00000406757 WDR83OSQ9Y284 106 aa6.42□□□□□ -1.38
GPC3-203ENST00000406757 SELENOKQ9Y6D0 94 aa6.42□□□□□ -1.38
GPC3-203ENST00000406757 TRBV7-1A0A0A6YYK4 115 aa6.41□□□□□ -1.38
GPC3-203ENST00000406757 I3L521 148 aa6.41□□□□□ -1.38
GPC3-203ENST00000406757 BMPR1BO00238 502 aa6.41□□□□□ -1.38
GPC3-203ENST00000406757 AGPAT2O15120 278 aa6.41□□□□□ -1.38
GPC3-203ENST00000406757 TGOLN2O43493 480 aa6.41□□□□□ -1.38
GPC3-203ENST00000406757 ZNF207O43670 478 aaKnown RBP6.41□□□□□ -1.38
GPC3-203ENST00000406757 EIF3GO75821 320 aaKnown RBP eCLIP6.41□□□□□ -1.38
GPC3-203ENST00000406757 IGKV1-17P01599 117 aa6.41□□□□□ -1.38
GPC3-203ENST00000406757 LGALS1P09382 135 aaKnown RBP6.41□□□□□ -1.38
GPC3-203ENST00000406757 CDX1P47902 265 aaPredicted RBP6.41□□□□□ -1.38
GPC3-203ENST00000406757 SLURP1P55000 103 aa6.41□□□□□ -1.38
GPC3-203ENST00000406757 TEPPQ6URK8 271 aa6.41□□□□□ -1.38
GPC3-203ENST00000406757 CYP2G1PQ6ZSU1 146 aa6.41□□□□□ -1.38
GPC3-203ENST00000406757 THAP8Q8NA92 274 aa6.41□□□□□ -1.38
GPC3-203ENST00000406757 TMEM116Q8NCL8 245 aa6.41□□□□□ -1.38
GPC3-203ENST00000406757 BPIFCQ8NFQ6 507 aa6.41□□□□□ -1.38
GPC3-203ENST00000406757 OR11H1Q8NG94 326 aa6.41□□□□□ -1.38
GPC3-203ENST00000406757 ZNF414Q96IQ9 312 aa6.41□□□□□ -1.38
GPC3-203ENST00000406757 DOK5Q9P104 306 aa6.41□□□□□ -1.38
GPC3-203ENST00000406757 TSSC4Q9Y5U2 329 aaPredicted RBP6.41□□□□□ -1.38
GPC3-203ENST00000406757 KMT2CQ8NEZ4 4911 aaKnown RBP6.4□□□□□ -1.38
GPC3-203ENST00000406757 BORCS7-ASMTA0A0B4J1R7 106 aa6.4□□□□□ -1.38
GPC3-203ENST00000406757 TAAR5O14804 337 aa6.4□□□□□ -1.38
GPC3-203ENST00000406757 NUPL2O15504 423 aaKnown RBP6.4□□□□□ -1.38
GPC3-203ENST00000406757 YIF1AO95070 293 aa6.4□□□□□ -1.38
GPC3-203ENST00000406757 HSPB1P04792 205 aaKnown RBP6.4□□□□□ -1.38
GPC3-203ENST00000406757 LINC00869P0C866 280 aa6.4□□□□□ -1.38
GPC3-203ENST00000406757 PSG1P11464 419 aa6.4□□□□□ -1.38
GPC3-203ENST00000406757 EDN2P20800 178 aa6.4□□□□□ -1.38
GPC3-203ENST00000406757 ATP6V0CP27449 155 aa6.4□□□□□ -1.38
GPC3-203ENST00000406757 CAMLGP49069 296 aa6.4□□□□□ -1.38
GPC3-203ENST00000406757 ELLP55199 621 aaPredicted RBP6.4□□□□□ -1.38
GPC3-203ENST00000406757 GCSAMLQ5JQS6 135 aa6.4□□□□□ -1.38
GPC3-203ENST00000406757 OR1N2Q8NGR9 330 aa6.4□□□□□ -1.38
GPC3-203ENST00000406757 C4orf3Q8WVX3 66 aa6.4□□□□□ -1.38
GPC3-203ENST00000406757 RCC1LQ96I51 464 aaKnown RBP6.4□□□□□ -1.38
GPC3-203ENST00000406757 RAX2Q96IS3 184 aa6.4□□□□□ -1.38
GPC3-203ENST00000406757 TRGV9Q99603 122 aa6.4□□□□□ -1.38
GPC3-203ENST00000406757 TXN2Q99757 166 aa6.4□□□□□ -1.38
GPC3-203ENST00000406757 GGTLC1Q9BX51 225 aa6.4□□□□□ -1.38
GPC3-203ENST00000406757 NPCDR1Q9BY65 106 aa6.4□□□□□ -1.38
GPC3-203ENST00000406757 VSIRQ9H7M9 311 aa6.4□□□□□ -1.38
GPC3-203ENST00000406757 SLC45A2Q9UMX9 530 aa6.4□□□□□ -1.38
GPC3-203ENST00000406757 LSM4Q9Y4Z0 139 aaKnown RBP6.4□□□□□ -1.38
GPC3-203ENST00000406757 DNAH3Q8TD57 4116 aa6.4□□□□□ -1.39
GPC3-203ENST00000406757 TRAV30A0A087WSZ9 112 aa6.39□□□□□ -1.39
GPC3-203ENST00000406757 IGHV3-49A0A0A0MS15 119 aa6.39□□□□□ -1.39
GPC3-203ENST00000406757 ZNF320A2RRD8 509 aa6.39□□□□□ -1.39
GPC3-203ENST00000406757 FNDC10F2Z333 226 aa6.39□□□□□ -1.39
GPC3-203ENST00000406757 GGCTO75223 188 aaKnown RBP6.39□□□□□ -1.39
GPC3-203ENST00000406757 SCAF4O95104 1147 aaKnown RBP6.39□□□□□ -1.39
GPC3-203ENST00000406757 CFDP00746 253 aaPredicted RBP6.39□□□□□ -1.39
GPC3-203ENST00000406757 RD3LP0DJH9 198 aa6.39□□□□□ -1.39
GPC3-203ENST00000406757 ORM2P19652 201 aa6.39□□□□□ -1.39
GPC3-203ENST00000406757 FCGR2BP31994 310 aaPredicted RBP6.39□□□□□ -1.39
GPC3-203ENST00000406757 LYZP61626 148 aa6.39□□□□□ -1.39
GPC3-203ENST00000406757 ZNF616Q08AN1 781 aa6.39□□□□□ -1.39
GPC3-203ENST00000406757 ZNF266Q14584 549 aa6.39□□□□□ -1.39
GPC3-203ENST00000406757 KPRPQ5T749 579 aaPredicted RBP6.39□□□□□ -1.39
GPC3-203ENST00000406757 TOMM20LQ6UXN7 152 aa6.39□□□□□ -1.39
GPC3-203ENST00000406757 UNQ9165/PRO28630Q6UXU0 137 aa6.39□□□□□ -1.39
GPC3-203ENST00000406757 OR51G1Q8NGK1 321 aa6.39□□□□□ -1.39
GPC3-203ENST00000406757 OR2G3Q8NGZ4 309 aa6.39□□□□□ -1.39
GPC3-203ENST00000406757 Q8WTZ3 238 aa6.39□□□□□ -1.39
GPC3-203ENST00000406757 ST8SIA2Q92186 375 aa6.39□□□□□ -1.39
GPC3-203ENST00000406757 DPF1Q92782 380 aa6.39□□□□□ -1.39
GPC3-203ENST00000406757 PPP1R14BQ96C90 147 aa6.39□□□□□ -1.39
GPC3-203ENST00000406757 GINS3Q9BRX5 216 aa6.39□□□□□ -1.39
GPC3-203ENST00000406757 C20orf24Q9BUV8 137 aa6.39□□□□□ -1.39
GPC3-203ENST00000406757 PBDC1Q9BVG4 233 aa6.39□□□□□ -1.39
GPC3-203ENST00000406757 SLC25A32Q9H2D1 315 aa6.39□□□□□ -1.39
GPC3-203ENST00000406757 PUS1Q9Y606 427 aaKnown RBP eCLIP6.39□□□□□ -1.39
GPC3-203ENST00000406757 PXMP4Q9Y6I8 212 aa6.39□□□□□ -1.39
GPC3-203ENST00000406757 IGHV3OR16-13A0A075B7E8 117 aa6.38□□□□□ -1.39
GPC3-203ENST00000406757 IGHV3-74A0A0B4J1X5 117 aa6.38□□□□□ -1.39
GPC3-203ENST00000406757 IGHV3-66A0A0C4DH42 116 aa6.38□□□□□ -1.39
GPC3-203ENST00000406757 LINC01619G3V211 115 aa6.38□□□□□ -1.39
GPC3-203ENST00000406757 CCL24O00175 119 aa6.38□□□□□ -1.39
GPC3-203ENST00000406757 EIF4EBP3O60516 100 aaPredicted RBP6.38□□□□□ -1.39
GPC3-203ENST00000406757 JTBO76095 146 aa6.38□□□□□ -1.39
GPC3-203ENST00000406757 TOMM40O96008 361 aa6.38□□□□□ -1.39
GPC3-203ENST00000406757 IL4P05112 153 aa6.38□□□□□ -1.39
GPC3-203ENST00000406757 HOXD3P31249 432 aaPredicted RBP6.38□□□□□ -1.39
GPC3-203ENST00000406757 SYNJ2BPP57105 145 aa6.38□□□□□ -1.39
GPC3-203ENST00000406757 YPEL3P61236 119 aaPredicted RBP6.38□□□□□ -1.39
GPC3-203ENST00000406757 B2MP61769 119 aa6.38□□□□□ -1.39
GPC3-203ENST00000406757 RAB31Q13636 194 aa6.38□□□□□ -1.39
GPC3-203ENST00000406757 RPEL1Q2QD12 228 aa6.38□□□□□ -1.39
GPC3-203ENST00000406757 FFAR4Q5NUL3 377 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms