RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 KCNS1Q96KK3 526 aa7.86□□□□□ -1.15
MSH2-202ENST00000406134 KLF12Q9Y4X4 402 aa7.86□□□□□ -1.15
MSH2-202ENST00000406134 IGHV3-72A0A0B4J1Y9 119 aa7.85□□□□□ -1.15
MSH2-202ENST00000406134 TPPP2P59282 170 aa7.85□□□□□ -1.15
MSH2-202ENST00000406134 TAS2R45P59539 299 aa7.85□□□□□ -1.15
MSH2-202ENST00000406134 PAX2Q02962 417 aa7.85□□□□□ -1.15
MSH2-202ENST00000406134 MRPL54Q6P161 138 aaKnown RBP7.85□□□□□ -1.15
MSH2-202ENST00000406134 NUP35Q8NFH5 326 aa7.85□□□□□ -1.15
MSH2-202ENST00000406134 NUDT10Q8NFP7 164 aa7.85□□□□□ -1.15
MSH2-202ENST00000406134 NUDT11Q96G61 164 aa7.85□□□□□ -1.15
MSH2-202ENST00000406134 ARHGAP32A7KAX9 2087 aa7.85□□□□□ -1.15
MSH2-202ENST00000406134 A0A1W2PN81 502 aa7.85□□□□□ -1.15
MSH2-202ENST00000406134 PRR31Q5SQ13 230 aa7.85□□□□□ -1.15
MSH2-202ENST00000406134 C10orf113Q5VZT2 155 aa7.85□□□□□ -1.15
MSH2-202ENST00000406134 LINC00305Q7Z4B0 112 aa7.85□□□□□ -1.15
MSH2-202ENST00000406134 SPATA12Q7Z6I5 190 aa7.85□□□□□ -1.15
MSH2-202ENST00000406134 SPACA3Q8IXA5 215 aa7.85□□□□□ -1.15
MSH2-202ENST00000406134 TSKUQ8WUA8 353 aa7.85□□□□□ -1.15
MSH2-202ENST00000406134 H1FXQ92522 213 aaKnown RBP7.85□□□□□ -1.15
MSH2-202ENST00000406134 PAXXQ9BUH6 204 aa7.85□□□□□ -1.15
MSH2-202ENST00000406134 GSX1Q9H4S2 264 aaPredicted RBP7.85□□□□□ -1.15
MSH2-202ENST00000406134 TBL2Q9Y4P3 447 aaKnown RBP7.85□□□□□ -1.15
MSH2-202ENST00000406134 AMMECR1Q9Y4X0 333 aaPredicted RBP7.85□□□□□ -1.15
MSH2-202ENST00000406134 LINC00614P0C842 121 aa7.85□□□□□ -1.15
MSH2-202ENST00000406134 ERHP84090 104 aaKnown RBP7.85□□□□□ -1.15
MSH2-202ENST00000406134 TOMM20LQ6UXN7 152 aa7.85□□□□□ -1.15
MSH2-202ENST00000406134 OR10X1Q8NGY0 326 aa7.85□□□□□ -1.15
MSH2-202ENST00000406134 C18orf32Q8TCD1 76 aa7.85□□□□□ -1.15
MSH2-202ENST00000406134 NAT8BQ9UHF3 227 aa7.85□□□□□ -1.15
MSH2-202ENST00000406134 SRIP30626 198 aa7.84□□□□□ -1.15
MSH2-202ENST00000406134 RANP62826 216 aaKnown RBP7.84□□□□□ -1.15
MSH2-202ENST00000406134 TMEM183BQ1AE95 376 aa7.84□□□□□ -1.15
MSH2-202ENST00000406134 FAM120AOSQ5T036 256 aa7.84□□□□□ -1.15
MSH2-202ENST00000406134 TMEM116Q8NCL8 245 aa7.84□□□□□ -1.15
MSH2-202ENST00000406134 PRSS22Q9GZN4 317 aa7.84□□□□□ -1.15
MSH2-202ENST00000406134 LY6LH3BQJ8 138 aa7.84□□□□□ -1.15
MSH2-202ENST00000406134 CIDEAO60543 219 aa7.84□□□□□ -1.15
MSH2-202ENST00000406134 IGLV2-11P01706 119 aa7.84□□□□□ -1.15
MSH2-202ENST00000406134 HOXB4P17483 251 aaPredicted RBP7.84□□□□□ -1.15
MSH2-202ENST00000406134 TIGITQ495A1 244 aa7.84□□□□□ -1.15
MSH2-202ENST00000406134 HCP5Q6MZN7 132 aa7.84□□□□□ -1.15
MSH2-202ENST00000406134 RNASE8Q8TDE3 154 aaKnown RBP7.84□□□□□ -1.15
MSH2-202ENST00000406134 GTSF1Q8WW33 167 aa7.84□□□□□ -1.15
MSH2-202ENST00000406134 TMEM133Q9H2Q1 129 aa7.84□□□□□ -1.15
MSH2-202ENST00000406134 C19orf71A6NCJ1 209 aa7.84□□□□□ -1.15
MSH2-202ENST00000406134 MT-ND6P03923 174 aa7.84□□□□□ -1.15
MSH2-202ENST00000406134 APELAP0DMC3 54 aa7.84□□□□□ -1.15
MSH2-202ENST00000406134 MGST1P10620 155 aaKnown RBP7.84□□□□□ -1.15
MSH2-202ENST00000406134 VN1R17PQ8TDU5 208 aa7.84□□□□□ -1.15
MSH2-202ENST00000406134 NRN1Q9NPD7 142 aa7.84□□□□□ -1.15
MSH2-202ENST00000406134 IGHV2-26A0A0B4J1V2 119 aa7.83□□□□□ -1.16
MSH2-202ENST00000406134 COX7A2P2O60397 106 aa7.83□□□□□ -1.16
MSH2-202ENST00000406134 Q5PR19 223 aa7.83□□□□□ -1.16
MSH2-202ENST00000406134 IGFBPL1Q8WX77 278 aa7.83□□□□□ -1.16
MSH2-202ENST00000406134 SGK494Q96LW2 274 aa7.83□□□□□ -1.16
MSH2-202ENST00000406134 RNF2Q99496 336 aa7.83□□□□□ -1.16
MSH2-202ENST00000406134 LYNX1G3V0Z9 82 aa7.83□□□□□ -1.16
MSH2-202ENST00000406134 NDUFB3O43676 98 aa7.83□□□□□ -1.16
MSH2-202ENST00000406134 RPLP1P05386 114 aaKnown RBP7.83□□□□□ -1.16
MSH2-202ENST00000406134 LYNX1P0DP58 116 aa7.83□□□□□ -1.16
MSH2-202ENST00000406134 PLP1P60201 277 aa7.83□□□□□ -1.16
MSH2-202ENST00000406134 LEMD1Q68G75 181 aa7.83□□□□□ -1.16
MSH2-202ENST00000406134 WDR73Q6P4I2 378 aa7.83□□□□□ -1.16
MSH2-202ENST00000406134 VSTM2AQ8TAG5 236 aa7.83□□□□□ -1.16
MSH2-202ENST00000406134 TRGV9Q99603 122 aa7.83□□□□□ -1.16
MSH2-202ENST00000406134 SIGLEC9Q9Y336 463 aa7.83□□□□□ -1.16
MSH2-202ENST00000406134 ZNF324O75467 553 aaPredicted RBP7.83□□□□□ -1.16
MSH2-202ENST00000406134 LTAP01374 205 aa7.83□□□□□ -1.16
MSH2-202ENST00000406134 FAM87AP0C7U9 286 aa7.83□□□□□ -1.16
MSH2-202ENST00000406134 KLF5Q13887 457 aaPredicted RBP7.83□□□□□ -1.16
MSH2-202ENST00000406134 LRRC10Q5BKY1 277 aa7.83□□□□□ -1.16
MSH2-202ENST00000406134 BAGE3Q86Y29 109 aa7.83□□□□□ -1.16
MSH2-202ENST00000406134 BAGE2Q86Y30 109 aa7.83□□□□□ -1.16
MSH2-202ENST00000406134 COL6A6A6NMZ7 2263 aa7.82□□□□□ -1.16
MSH2-202ENST00000406134 IGHV3-21A0A0B4J1V1 117 aa7.82□□□□□ -1.16
MSH2-202ENST00000406134 OR2J3O76001 311 aa7.82□□□□□ -1.16
MSH2-202ENST00000406134 BRS3P32247 399 aa7.82□□□□□ -1.16
MSH2-202ENST00000406134 CDSNQ15517 529 aa7.82□□□□□ -1.16
MSH2-202ENST00000406134 TBR1Q16650 682 aa7.82□□□□□ -1.16
MSH2-202ENST00000406134 FAM19A2Q8N3H0 131 aa7.82□□□□□ -1.16
MSH2-202ENST00000406134 KIR3DL3Q8N743 410 aa7.82□□□□□ -1.16
MSH2-202ENST00000406134 MIEN1Q9BRT3 115 aa7.82□□□□□ -1.16
MSH2-202ENST00000406134 EPDR1Q9UM22 224 aa7.82□□□□□ -1.16
MSH2-202ENST00000406134 PAM16Q9Y3D7 125 aa7.82□□□□□ -1.16
MSH2-202ENST00000406134 CHTOPQ9Y3Y2 248 aaKnown RBP7.82□□□□□ -1.16
MSH2-202ENST00000406134 AKAP6Q13023 2319 aa7.82□□□□□ -1.16
MSH2-202ENST00000406134 IGHV1-3A0A0C4DH29 117 aa7.82□□□□□ -1.16
MSH2-202ENST00000406134 I3L2K1 104 aa7.82□□□□□ -1.16
MSH2-202ENST00000406134 HLA-DQA1P01909 254 aa7.82□□□□□ -1.16
MSH2-202ENST00000406134 APOHP02749 345 aaPredicted RBP7.82□□□□□ -1.16
MSH2-202ENST00000406134 C3orf79P0CE67 100 aa7.82□□□□□ -1.16
MSH2-202ENST00000406134 TEX45Q8NA69 505 aa7.82□□□□□ -1.16
MSH2-202ENST00000406134 OR1L4Q8NGR5 311 aa7.82□□□□□ -1.16
MSH2-202ENST00000406134 GRAMD2BQ96HH9 432 aa7.82□□□□□ -1.16
MSH2-202ENST00000406134 FAM103A1Q9BTL3 118 aaKnown RBP7.82□□□□□ -1.16
MSH2-202ENST00000406134 SSBP4Q9BWG4 385 aaPredicted RBP7.82□□□□□ -1.16
MSH2-202ENST00000406134 BUB1B-PAK6H3BSN5 160 aa7.82□□□□□ -1.16
MSH2-202ENST00000406134 GRNP28799 593 aaKnown RBP7.82□□□□□ -1.16
MSH2-202ENST00000406134 RBX1P62877 108 aa7.82□□□□□ -1.16
MSH2-202ENST00000406134 RASL11AQ6T310 242 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms