RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 CD55P08174 381 aa9.66□□□□□ -0.86
RAPGEF3-204ENST00000405493 Q9H3A6 140 aa9.66□□□□□ -0.86
RAPGEF3-204ENST00000405493 PRDM13Q9H4Q3 707 aa9.66□□□□□ -0.86
RAPGEF3-204ENST00000405493 HIST1H4GQ99525 98 aa9.65□□□□□ -0.86
RAPGEF3-204ENST00000405493 NRN1Q9NPD7 142 aa9.65□□□□□ -0.86
RAPGEF3-204ENST00000405493 SCN8AQ9UQD0 1980 aa9.65□□□□□ -0.86
RAPGEF3-204ENST00000405493 A0A1B0GUS0 222 aa9.65□□□□□ -0.86
RAPGEF3-204ENST00000405493 LEPP41159 167 aa9.65□□□□□ -0.86
RAPGEF3-204ENST00000405493 FOXA3P55318 350 aaPredicted RBP9.65□□□□□ -0.86
RAPGEF3-204ENST00000405493 PAX8Q06710 450 aa9.65□□□□□ -0.86
RAPGEF3-204ENST00000405493 TRAV1-1A0A0B4J248 108 aa9.65□□□□□ -0.86
RAPGEF3-204ENST00000405493 KIF26BQ2KJY2 2108 aa9.65□□□□□ -0.86
RAPGEF3-204ENST00000405493 NIT1Q86X76 327 aa9.65□□□□□ -0.86
RAPGEF3-204ENST00000405493 TMEM190Q8WZ59 177 aa9.65□□□□□ -0.86
RAPGEF3-204ENST00000405493 DUX3Q96PT4 197 aa9.65□□□□□ -0.86
RAPGEF3-204ENST00000405493 ALKBH7Q9BT30 221 aaPredicted RBP9.65□□□□□ -0.86
RAPGEF3-204ENST00000405493 EP400Q96L91 3159 aa9.65□□□□□ -0.86
RAPGEF3-204ENST00000405493 IGKV1-27A0A075B6S5 117 aa9.65□□□□□ -0.86
RAPGEF3-204ENST00000405493 TMEM238LA0A1B0GVL6 79 aa9.65□□□□□ -0.86
RAPGEF3-204ENST00000405493 A6NJY4 79 aa9.65□□□□□ -0.86
RAPGEF3-204ENST00000405493 LYL1P12980 280 aa9.65□□□□□ -0.86
RAPGEF3-204ENST00000405493 LTBP2Q14767 1821 aa9.65□□□□□ -0.86
RAPGEF3-204ENST00000405493 SPTBN1Q01082 2364 aaKnown RBP9.65□□□□□ -0.87
RAPGEF3-204ENST00000405493 M0R381 172 aa9.65□□□□□ -0.87
RAPGEF3-204ENST00000405493 ADMP35318 185 aa9.65□□□□□ -0.87
RAPGEF3-204ENST00000405493 SAA4P35542 130 aa9.65□□□□□ -0.87
RAPGEF3-204ENST00000405493 SLC25A48Q6ZT89 311 aaKnown RBP9.65□□□□□ -0.87
RAPGEF3-204ENST00000405493 BUB1B-PAK6H3BSN5 160 aa9.64□□□□□ -0.87
RAPGEF3-204ENST00000405493 RNASE4P34096 147 aaKnown RBP9.64□□□□□ -0.87
RAPGEF3-204ENST00000405493 ASIPP42127 132 aa9.64□□□□□ -0.87
RAPGEF3-204ENST00000405493 GNG5P63218 68 aa9.64□□□□□ -0.87
RAPGEF3-204ENST00000405493 MST1LQ2TV78 715 aa9.64□□□□□ -0.87
RAPGEF3-204ENST00000405493 TCF23Q7RTU1 214 aa9.64□□□□□ -0.87
RAPGEF3-204ENST00000405493 LINC01587Q99440 93 aa9.64□□□□□ -0.87
RAPGEF3-204ENST00000405493 PLAURQ03405 335 aa9.64□□□□□ -0.87
RAPGEF3-204ENST00000405493 TMEM42Q69YG0 159 aa9.64□□□□□ -0.87
RAPGEF3-204ENST00000405493 KIR3DL3Q8N743 410 aa9.64□□□□□ -0.87
RAPGEF3-204ENST00000405493 RPP21Q9H633 154 aaKnown RBP9.64□□□□□ -0.87
RAPGEF3-204ENST00000405493 FAM223BA6NKX1 122 aa9.64□□□□□ -0.87
RAPGEF3-204ENST00000405493 IGLV1-44P01699 117 aa9.64□□□□□ -0.87
RAPGEF3-204ENST00000405493 KLRD1Q13241 179 aa9.64□□□□□ -0.87
RAPGEF3-204ENST00000405493 C5orf64Q2M2E5 130 aa9.64□□□□□ -0.87
RAPGEF3-204ENST00000405493 FAM223AQ8IWN6 122 aa9.64□□□□□ -0.87
RAPGEF3-204ENST00000405493 CD177Q8N6Q3 437 aa9.64□□□□□ -0.87
RAPGEF3-204ENST00000405493 KLHL30-AS1Q8NEE0 82 aa9.64□□□□□ -0.87
RAPGEF3-204ENST00000405493 KIR2DL4Q99706 377 aa9.64□□□□□ -0.87
RAPGEF3-204ENST00000405493 LOC107984156A0A0G2JMH3 177 aa9.63□□□□□ -0.87
RAPGEF3-204ENST00000405493 ARL17AQ8IVW1 177 aa9.63□□□□□ -0.87
RAPGEF3-204ENST00000405493 FAM19A2Q8N3H0 131 aa9.63□□□□□ -0.87
RAPGEF3-204ENST00000405493 C1orf194Q5T5A4 169 aa9.63□□□□□ -0.87
RAPGEF3-204ENST00000405493 TMEM219Q86XT9 240 aa9.63□□□□□ -0.87
RAPGEF3-204ENST00000405493 PIP4P2Q8N4L2 257 aa9.63□□□□□ -0.87
RAPGEF3-204ENST00000405493 DPH3Q96FX2 82 aa9.63□□□□□ -0.87
RAPGEF3-204ENST00000405493 C1QTNF4Q9BXJ3 329 aa9.63□□□□□ -0.87
RAPGEF3-204ENST00000405493 NCOR1P1Q9H4R4 102 aa9.63□□□□□ -0.87
RAPGEF3-204ENST00000405493 PTPRDP23468 1912 aa9.63□□□□□ -0.87
RAPGEF3-204ENST00000405493 DUTP33316 252 aaKnown RBP9.63□□□□□ -0.87
RAPGEF3-204ENST00000405493 PRELID3AQ96N28 172 aa9.63□□□□□ -0.87
RAPGEF3-204ENST00000405493 SPRY4Q9C004 299 aa9.63□□□□□ -0.87
RAPGEF3-204ENST00000405493 TRBV7-1A0A0A6YYK4 115 aa9.63□□□□□ -0.87
RAPGEF3-204ENST00000405493 C5orf63A6NC05 138 aa9.63□□□□□ -0.87
RAPGEF3-204ENST00000405493 DTX2Q86UW9 622 aa9.63□□□□□ -0.87
RAPGEF3-204ENST00000405493 PNRC2Q9NPJ4 139 aaKnown RBP9.63□□□□□ -0.87
RAPGEF3-204ENST00000405493 DLEU1O43261 78 aa9.62□□□□□ -0.87
RAPGEF3-204ENST00000405493 NAPSAO96009 420 aa9.62□□□□□ -0.87
RAPGEF3-204ENST00000405493 LY6HO94772 140 aa9.62□□□□□ -0.87
RAPGEF3-204ENST00000405493 C18orf15Q96N68 181 aa9.62□□□□□ -0.87
RAPGEF3-204ENST00000405493 TMEM144Q7Z5S9 345 aa9.62□□□□□ -0.87
RAPGEF3-204ENST00000405493 VSIRQ9H7M9 311 aa9.62□□□□□ -0.87
RAPGEF3-204ENST00000405493 C9JQL5 133 aa9.62□□□□□ -0.87
RAPGEF3-204ENST00000405493 CFHR2P36980 270 aa9.62□□□□□ -0.87
RAPGEF3-204ENST00000405493 PRCDQ00LT1 54 aa9.62□□□□□ -0.87
RAPGEF3-204ENST00000405493 NBASA2RRP1 2371 aa9.62□□□□□ -0.87
RAPGEF3-204ENST00000405493 MLNRO43193 412 aa9.61□□□□□ -0.87
RAPGEF3-204ENST00000405493 SRSF8Q9BRL6 282 aaKnown RBP9.61□□□□□ -0.87
RAPGEF3-204ENST00000405493 TRGV2A0A075B6R0 118 aa9.61□□□□□ -0.87
RAPGEF3-204ENST00000405493 APOHP02749 345 aaPredicted RBP9.61□□□□□ -0.87
RAPGEF3-204ENST00000405493 ST6GALNAC6Q969X2 333 aa9.61□□□□□ -0.87
RAPGEF3-204ENST00000405493 TMEM160Q9NX00 188 aa9.61□□□□□ -0.87
RAPGEF3-204ENST00000405493 OTORQ9NRC9 128 aa9.61□□□□□ -0.87
RAPGEF3-204ENST00000405493 IGLV3-9A0A075B6K5 115 aa9.61□□□□□ -0.87
RAPGEF3-204ENST00000405493 TMEM262E9PQX1 116 aa9.61□□□□□ -0.87
RAPGEF3-204ENST00000405493 K7EM74 188 aa9.61□□□□□ -0.87
RAPGEF3-204ENST00000405493 SELLP14151 372 aa9.61□□□□□ -0.87
RAPGEF3-204ENST00000405493 RNASE7Q9H1E1 156 aaKnown RBP9.61□□□□□ -0.87
RAPGEF3-204ENST00000405493 ITGB1BP1O14713 200 aa9.61□□□□□ -0.87
RAPGEF3-204ENST00000405493 QRFPP83859 136 aa9.61□□□□□ -0.87
RAPGEF3-204ENST00000405493 PAPPA-AS1Q5QFB9 102 aa9.61□□□□□ -0.87
RAPGEF3-204ENST00000405493 LCNL1Q6ZST4 164 aa9.61□□□□□ -0.87
RAPGEF3-204ENST00000405493 TRBV6-6A0A0A6YYG2 114 aa9.6□□□□□ -0.87
RAPGEF3-204ENST00000405493 IZUMO1RA6ND01 250 aa9.6□□□□□ -0.87
RAPGEF3-204ENST00000405493 PYYP10082 97 aa9.6□□□□□ -0.87
RAPGEF3-204ENST00000405493 TMEM136Q6ZRR5 245 aa9.6□□□□□ -0.87
RAPGEF3-204ENST00000405493 TP53BP1Q12888 1972 aaPredicted RBP9.6□□□□□ -0.87
RAPGEF3-204ENST00000405493 PPP1R17O96001 155 aa9.6□□□□□ -0.87
RAPGEF3-204ENST00000405493 CFPP27918 469 aa9.6□□□□□ -0.87
RAPGEF3-204ENST00000405493 MEIG1Q5JSS6 88 aa9.6□□□□□ -0.87
RAPGEF3-204ENST00000405493 LHFPL4Q7Z7J7 247 aa9.6□□□□□ -0.87
RAPGEF3-204ENST00000405493 OR10W1Q8NGF6 305 aa9.6□□□□□ -0.87
RAPGEF3-204ENST00000405493 GLMPQ8WWB7 406 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms