RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 GRAMD2BQ96HH9 432 aa7.74□□□□□ -1.17
SMC1B-202ENST00000404354 TPSG1Q9NRR2 321 aa7.74□□□□□ -1.17
SMC1B-202ENST00000404354 PRNDQ9UKY0 176 aa7.74□□□□□ -1.17
SMC1B-202ENST00000404354 C21orf140B9A014 251 aa7.74□□□□□ -1.17
SMC1B-202ENST00000404354 OCIAD2Q56VL3 154 aa7.74□□□□□ -1.17
SMC1B-202ENST00000404354 SARAFQ96BY9 339 aa7.74□□□□□ -1.17
SMC1B-202ENST00000404354 CHRDL1Q9BU40 450 aa7.74□□□□□ -1.17
SMC1B-202ENST00000404354 TMUB1Q9BVT8 246 aa7.74□□□□□ -1.17
SMC1B-202ENST00000404354 CHODLQ9H9P2 273 aa7.74□□□□□ -1.17
SMC1B-202ENST00000404354 KBTBD11-OT1A0A1B0GTJ5 212 aa7.73□□□□□ -1.17
SMC1B-202ENST00000404354 hADV38S2A0JD32 116 aa7.73□□□□□ -1.17
SMC1B-202ENST00000404354 P01737 135 aa7.73□□□□□ -1.17
SMC1B-202ENST00000404354 WT1-ASQ06250 92 aa7.73□□□□□ -1.17
SMC1B-202ENST00000404354 PDPNQ86YL7 162 aa7.73□□□□□ -1.17
SMC1B-202ENST00000404354 H1FXQ92522 213 aaKnown RBP7.73□□□□□ -1.17
SMC1B-202ENST00000404354 MRPL27Q9P0M9 148 aaKnown RBP7.73□□□□□ -1.17
SMC1B-202ENST00000404354 RELNP78509 3460 aa7.73□□□□□ -1.17
SMC1B-202ENST00000404354 TECTAO75443 2155 aa7.73□□□□□ -1.17
SMC1B-202ENST00000404354 GAGE12BA1L429 117 aa7.73□□□□□ -1.17
SMC1B-202ENST00000404354 IGKV3-15P01624 115 aa7.73□□□□□ -1.17
SMC1B-202ENST00000404354 HIST1H1EP10412 219 aaKnown RBP7.73□□□□□ -1.17
SMC1B-202ENST00000404354 WT1P19544 449 aaPredicted RBP7.73□□□□□ -1.17
SMC1B-202ENST00000404354 AARDQ4LEZ3 155 aa7.73□□□□□ -1.17
SMC1B-202ENST00000404354 PRNTQ86SH4 94 aa7.73□□□□□ -1.17
SMC1B-202ENST00000404354 OR8A1Q8NGG7 326 aa7.73□□□□□ -1.17
SMC1B-202ENST00000404354 AKAP6Q13023 2319 aa7.73□□□□□ -1.17
SMC1B-202ENST00000404354 NKX2-8O15522 239 aa7.73□□□□□ -1.17
SMC1B-202ENST00000404354 FAM106CPP0CH98 169 aa7.73□□□□□ -1.17
SMC1B-202ENST00000404354 HBBP68871 147 aa7.73□□□□□ -1.17
SMC1B-202ENST00000404354 ERHP84090 104 aaKnown RBP7.73□□□□□ -1.17
SMC1B-202ENST00000404354 RTL8BQ17RB0 113 aa7.73□□□□□ -1.17
SMC1B-202ENST00000404354 FAM106AQ4KMX7 169 aa7.73□□□□□ -1.17
SMC1B-202ENST00000404354 EXOC3-AS1Q8N2X6 119 aa7.73□□□□□ -1.17
SMC1B-202ENST00000404354 MDS2Q8NDY4 140 aa7.73□□□□□ -1.17
SMC1B-202ENST00000404354 RITA1Q96K30 269 aa7.73□□□□□ -1.17
SMC1B-202ENST00000404354 APC2O95996 2303 aa7.73□□□□□ -1.17
SMC1B-202ENST00000404354 PTPRZ1P23471 2315 aaPredicted RBP7.72□□□□□ -1.17
SMC1B-202ENST00000404354 ITGB1BP1O14713 200 aa7.72□□□□□ -1.17
SMC1B-202ENST00000404354 SLC25A17O43808 307 aa7.72□□□□□ -1.17
SMC1B-202ENST00000404354 COL8A1P27658 744 aa7.72□□□□□ -1.17
SMC1B-202ENST00000404354 HTR1DP28221 377 aa7.72□□□□□ -1.17
SMC1B-202ENST00000404354 PRSS57Q6UWY2 283 aa7.72□□□□□ -1.17
SMC1B-202ENST00000404354 RPRMLQ8N4K4 120 aa7.72□□□□□ -1.17
SMC1B-202ENST00000404354 MEGF9Q9H1U4 602 aa7.72□□□□□ -1.17
SMC1B-202ENST00000404354 ZNF257Q9Y2Q1 563 aa7.72□□□□□ -1.17
SMC1B-202ENST00000404354 S4R3C0 116 aa7.72□□□□□ -1.17
SMC1B-202ENST00000404354 MALRD1Q5VYJ5 2156 aa7.72□□□□□ -1.17
SMC1B-202ENST00000404354 SERTM2A0A1B0GWG4 89 aa7.72□□□□□ -1.17
SMC1B-202ENST00000404354 F2RL2O00254 374 aa7.72□□□□□ -1.17
SMC1B-202ENST00000404354 GOSR1O95249 250 aa7.72□□□□□ -1.17
SMC1B-202ENST00000404354 NCR2O95944 276 aa7.72□□□□□ -1.17
SMC1B-202ENST00000404354 COX19Q49B96 90 aa7.72□□□□□ -1.17
SMC1B-202ENST00000404354 FAM120AOSQ5T036 256 aa7.72□□□□□ -1.17
SMC1B-202ENST00000404354 FXYD5Q96DB9 178 aa7.72□□□□□ -1.17
SMC1B-202ENST00000404354 EPDR1Q9UM22 224 aa7.72□□□□□ -1.17
SMC1B-202ENST00000404354 BDP1A6H8Y1 2624 aa7.72□□□□□ -1.17
SMC1B-202ENST00000404354 TRAV30A0A087WSZ9 112 aa7.72□□□□□ -1.17
SMC1B-202ENST00000404354 FBLL1A6NHQ2 334 aaKnown RBP7.72□□□□□ -1.17
SMC1B-202ENST00000404354 FAM90A9PA6NNJ1 464 aa7.72□□□□□ -1.17
SMC1B-202ENST00000404354 K7EP13 123 aa7.72□□□□□ -1.17
SMC1B-202ENST00000404354 ACP1P24666 158 aa7.72□□□□□ -1.17
SMC1B-202ENST00000404354 ARL6IP6Q8N6S5 226 aa7.72□□□□□ -1.17
SMC1B-202ENST00000404354 IGFBPL1Q8WX77 278 aa7.72□□□□□ -1.17
SMC1B-202ENST00000404354 ZGRF1Q86YA3 2104 aa7.72□□□□□ -1.17
SMC1B-202ENST00000404354 NBEAP1P0C6P0 100 aa7.71□□□□□ -1.17
SMC1B-202ENST00000404354 ARF6P62330 175 aa7.71□□□□□ -1.17
SMC1B-202ENST00000404354 LRRC10Q5BKY1 277 aa7.71□□□□□ -1.17
SMC1B-202ENST00000404354 BHLHA15Q7RTS1 189 aaPredicted RBP7.71□□□□□ -1.17
SMC1B-202ENST00000404354 K7EMI3 77 aa7.71□□□□□ -1.18
SMC1B-202ENST00000404354 KIR2DS2P43631 304 aa7.71□□□□□ -1.18
SMC1B-202ENST00000404354 PNKDQ8N490 385 aa7.71□□□□□ -1.18
SMC1B-202ENST00000404354 MAP1LC3CQ9BXW4 147 aa7.71□□□□□ -1.18
SMC1B-202ENST00000404354 TMEM191AQ9H0A3 160 aa7.71□□□□□ -1.18
SMC1B-202ENST00000404354 SSUH2Q9Y2M2 353 aa7.71□□□□□ -1.18
SMC1B-202ENST00000404354 ASH1LQ9NR48 2969 aaKnown RBP7.71□□□□□ -1.18
SMC1B-202ENST00000404354 C22orf34Q6ZV56 151 aa7.71□□□□□ -1.18
SMC1B-202ENST00000404354 GOLT1AQ6ZVE7 132 aa7.71□□□□□ -1.18
SMC1B-202ENST00000404354 RPP21Q9H633 154 aaKnown RBP7.71□□□□□ -1.18
SMC1B-202ENST00000404354 F11RQ9Y624 299 aaKnown RBP7.71□□□□□ -1.18
SMC1B-202ENST00000404354 C7orf71A4D174 169 aa7.7□□□□□ -1.18
SMC1B-202ENST00000404354 APOHP02749 345 aaPredicted RBP7.7□□□□□ -1.18
SMC1B-202ENST00000404354 FDCSPQ8NFU4 85 aa7.7□□□□□ -1.18
SMC1B-202ENST00000404354 SRSF12Q8WXF0 261 aaKnown RBP7.7□□□□□ -1.18
SMC1B-202ENST00000404354 LRBAP50851 2863 aa7.7□□□□□ -1.18
SMC1B-202ENST00000404354 H3BUT2 72 aa7.7□□□□□ -1.18
SMC1B-202ENST00000404354 DLL1O00548 723 aa7.7□□□□□ -1.18
SMC1B-202ENST00000404354 LYZP61626 148 aa7.7□□□□□ -1.18
SMC1B-202ENST00000404354 LOXL1Q08397 574 aaPredicted RBP7.7□□□□□ -1.18
SMC1B-202ENST00000404354 C2orf83Q53S99 150 aa7.7□□□□□ -1.18
SMC1B-202ENST00000404354 OR10X1Q8NGY0 326 aa7.7□□□□□ -1.18
SMC1B-202ENST00000404354 GPR82Q96P67 336 aa7.7□□□□□ -1.18
SMC1B-202ENST00000404354 ZNF430Q9H8G1 570 aaPredicted RBP7.7□□□□□ -1.18
SMC1B-202ENST00000404354 FAM231BA6NCW3 169 aa7.7□□□□□ -1.18
SMC1B-202ENST00000404354 C22orf46C9J442 243 aa7.7□□□□□ -1.18
SMC1B-202ENST00000404354 TNFAIP6P98066 277 aaPredicted RBP7.7□□□□□ -1.18
SMC1B-202ENST00000404354 OR1L8Q8NGR8 309 aa7.7□□□□□ -1.18
SMC1B-202ENST00000404354 PRSS3P2Q8NHM4 247 aa7.7□□□□□ -1.18
SMC1B-202ENST00000404354 C17orf77Q96MU5 243 aa7.7□□□□□ -1.18
SMC1B-202ENST00000404354 PSMB11A5LHX3 300 aa7.69□□□□□ -1.18
SMC1B-202ENST00000404354 GAGE10A6NGK3 116 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms