RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 ZNF785A8K8V0 405 aa10.34□□□□□ -0.75
VPREB1-202ENST00000403807 CHEK1O14757 476 aa10.34□□□□□ -0.75
VPREB1-202ENST00000403807 CST7O76096 145 aa10.34□□□□□ -0.75
VPREB1-202ENST00000403807 MPC2O95563 127 aa10.34□□□□□ -0.75
VPREB1-202ENST00000403807 CFDP00746 253 aaPredicted RBP10.34□□□□□ -0.75
VPREB1-202ENST00000403807 CD5P06127 495 aa10.34□□□□□ -0.75
VPREB1-202ENST00000403807 CRYBB3P26998 211 aa10.34□□□□□ -0.75
VPREB1-202ENST00000403807 HBG1P69891 147 aa10.34□□□□□ -0.75
VPREB1-202ENST00000403807 HBG2P69892 147 aa10.34□□□□□ -0.75
VPREB1-202ENST00000403807 SLC38A11Q08AI6 406 aa10.34□□□□□ -0.75
VPREB1-202ENST00000403807 ARL16Q0P5N6 197 aa10.34□□□□□ -0.75
VPREB1-202ENST00000403807 GUCA2BQ16661 112 aa10.34□□□□□ -0.75
VPREB1-202ENST00000403807 DEFB121Q5J5C9 76 aa10.34□□□□□ -0.75
VPREB1-202ENST00000403807 MRAPQ8TCY5 172 aa10.34□□□□□ -0.75
VPREB1-202ENST00000403807 TMEM231Q9H6L2 316 aa10.34□□□□□ -0.75
VPREB1-202ENST00000403807 OR5AC2Q9NZP5 309 aa10.34□□□□□ -0.75
VPREB1-202ENST00000403807 IGKV1OR2-108A0A075B7D4 117 aa10.33□□□□□ -0.76
VPREB1-202ENST00000403807 IGHV3-49A0A0A0MS15 119 aa10.33□□□□□ -0.76
VPREB1-202ENST00000403807 IGSF23A1L1A6 192 aa10.33□□□□□ -0.76
VPREB1-202ENST00000403807 H0YIZ8 118 aa10.33□□□□□ -0.76
VPREB1-202ENST00000403807 K7EIL1 84 aa10.33□□□□□ -0.76
VPREB1-202ENST00000403807 HNRNPCP07910 306 aaKnown RBP eCLIP10.33□□□□□ -0.76
VPREB1-202ENST00000403807 OR2F1Q13607 317 aa10.33□□□□□ -0.76
VPREB1-202ENST00000403807 ATP6V1FQ16864 119 aa10.33□□□□□ -0.76
VPREB1-202ENST00000403807 TEPPQ6URK8 271 aa10.33□□□□□ -0.76
VPREB1-202ENST00000403807 TMEM61Q8N0U2 210 aa10.33□□□□□ -0.76
VPREB1-202ENST00000403807 TMEM217Q8N7C4 229 aa10.33□□□□□ -0.76
VPREB1-202ENST00000403807 OR11H7Q8NGC8 314 aa10.33□□□□□ -0.76
VPREB1-202ENST00000403807 ASB13Q8WXK3 278 aa10.33□□□□□ -0.76
VPREB1-202ENST00000403807 RNF125Q96EQ8 232 aa10.33□□□□□ -0.76
VPREB1-202ENST00000403807 RNF126Q9BV68 326 aa10.33□□□□□ -0.76
VPREB1-202ENST00000403807 VSIRQ9H7M9 311 aa10.33□□□□□ -0.76
VPREB1-202ENST00000403807 PFDN2Q9UHV9 154 aa10.33□□□□□ -0.76
VPREB1-202ENST00000403807 RABAC1Q9UI14 185 aa10.33□□□□□ -0.76
VPREB1-202ENST00000403807 SELENOKQ9Y6D0 94 aa10.33□□□□□ -0.76
VPREB1-202ENST00000403807 IGHV3OR16-13A0A075B7E8 117 aa10.32□□□□□ -0.76
VPREB1-202ENST00000403807 IGHV3-74A0A0B4J1X5 117 aa10.32□□□□□ -0.76
VPREB1-202ENST00000403807 APOHP02749 345 aaPredicted RBP10.32□□□□□ -0.76
VPREB1-202ENST00000403807 GTSCR1Q86UQ5 136 aa10.32□□□□□ -0.76
VPREB1-202ENST00000403807 LILRB2Q8N423 598 aa10.32□□□□□ -0.76
VPREB1-202ENST00000403807 BPIFCQ8NFQ6 507 aa10.32□□□□□ -0.76
VPREB1-202ENST00000403807 THAP6Q8TBB0 222 aa10.32□□□□□ -0.76
VPREB1-202ENST00000403807 ST8SIA2Q92186 375 aa10.32□□□□□ -0.76
VPREB1-202ENST00000403807 GRAMD2BQ96HH9 432 aa10.32□□□□□ -0.76
VPREB1-202ENST00000403807 RNF2Q99496 336 aa10.32□□□□□ -0.76
VPREB1-202ENST00000403807 PBDC1Q9BVG4 233 aa10.32□□□□□ -0.76
VPREB1-202ENST00000403807 TSPAN4O14817 238 aa10.31□□□□□ -0.76
VPREB1-202ENST00000403807 LYZP61626 148 aa10.31□□□□□ -0.76
VPREB1-202ENST00000403807 SELENOTP62341 195 aa10.31□□□□□ -0.76
VPREB1-202ENST00000403807 EWSR1Q01844 656 aaKnown RBP eCLIP10.31□□□□□ -0.76
VPREB1-202ENST00000403807 NHLH2Q02577 135 aa10.31□□□□□ -0.76
VPREB1-202ENST00000403807 FGL1Q08830 312 aa10.31□□□□□ -0.76
VPREB1-202ENST00000403807 RAB31Q13636 194 aa10.31□□□□□ -0.76
VPREB1-202ENST00000403807 USF2Q15853 346 aaPredicted RBP10.31□□□□□ -0.76
VPREB1-202ENST00000403807 CYP2G1PQ6ZSU1 146 aa10.31□□□□□ -0.76
VPREB1-202ENST00000403807 SPAG8Q99932 426 aaPredicted RBP10.31□□□□□ -0.76
VPREB1-202ENST00000403807 UQCC1Q9NVA1 299 aa10.31□□□□□ -0.76
VPREB1-202ENST00000403807 U3KQE9 123 aa10.31□□□□□ -0.76
VPREB1-202ENST00000403807 MEGF8Q7Z7M0 2845 aa10.3□□□□□ -0.76
VPREB1-202ENST00000403807 IGHV3-66A0A0C4DH42 116 aa10.3□□□□□ -0.76
VPREB1-202ENST00000403807 GIPP09681 153 aaPredicted RBP10.3□□□□□ -0.76
VPREB1-202ENST00000403807 S100A7P31151 101 aa10.3□□□□□ -0.76
VPREB1-202ENST00000403807 NUP62P37198 522 aaPredicted RBP10.3□□□□□ -0.76
VPREB1-202ENST00000403807 EIF2B2P49770 351 aaKnown RBP10.3□□□□□ -0.76
VPREB1-202ENST00000403807 RAP2BP61225 183 aa10.3□□□□□ -0.76
VPREB1-202ENST00000403807 PAFAH1B2P68402 229 aa10.3□□□□□ -0.76
VPREB1-202ENST00000403807 BAXQ07812 192 aa10.3□□□□□ -0.76
VPREB1-202ENST00000403807 TCF24Q7RTU0 167 aa10.3□□□□□ -0.76
VPREB1-202ENST00000403807 TMEM147Q9BVK8 224 aa10.3□□□□□ -0.76
VPREB1-202ENST00000403807 LSM4Q9Y4Z0 139 aaKnown RBP10.3□□□□□ -0.76
VPREB1-202ENST00000403807 SMAD5-AS1Q9Y6J3 95 aa10.3□□□□□ -0.76
VPREB1-202ENST00000403807 SORL1Q92673 2214 aa10.3□□□□□ -0.76
VPREB1-202ENST00000403807 DFFBO76075 338 aa10.29□□□□□ -0.76
VPREB1-202ENST00000403807 LYL1P12980 280 aa10.29□□□□□ -0.76
VPREB1-202ENST00000403807 GATA2P23769 480 aaPredicted RBP10.29□□□□□ -0.76
VPREB1-202ENST00000403807 RPL12P30050 165 aaKnown RBP10.29□□□□□ -0.76
VPREB1-202ENST00000403807 AP2S1P53680 142 aaPredicted RBP10.29□□□□□ -0.76
VPREB1-202ENST00000403807 CD81P60033 236 aa10.29□□□□□ -0.76
VPREB1-202ENST00000403807 RPL11P62913 178 aaKnown RBP10.29□□□□□ -0.76
VPREB1-202ENST00000403807 VWC2Q2TAL6 325 aa10.29□□□□□ -0.76
VPREB1-202ENST00000403807 FAM90A2PQ658T7 463 aa10.29□□□□□ -0.76
VPREB1-202ENST00000403807 C16orf54Q6UWD8 224 aa10.29□□□□□ -0.76
VPREB1-202ENST00000403807 TMEM182Q6ZP80 229 aaPredicted RBP10.29□□□□□ -0.76
VPREB1-202ENST00000403807 Q8N1Y9 231 aa10.29□□□□□ -0.76
VPREB1-202ENST00000403807 OR5C1Q8NGR4 320 aa10.29□□□□□ -0.76
VPREB1-202ENST00000403807 PPP1R14BQ96C90 147 aa10.29□□□□□ -0.76
VPREB1-202ENST00000403807 NEURL2Q9BR09 285 aa10.29□□□□□ -0.76
VPREB1-202ENST00000403807 MBD2Q9UBB5 411 aa10.29□□□□□ -0.76
VPREB1-202ENST00000403807 OR4C46A6NHA9 309 aa10.28□□□□□ -0.76
VPREB1-202ENST00000403807 DNASE2O00115 360 aaPredicted RBP10.28□□□□□ -0.76
VPREB1-202ENST00000403807 AGPAT2O15120 278 aa10.28□□□□□ -0.76
VPREB1-202ENST00000403807 BUB3O43684 328 aa10.28□□□□□ -0.76
VPREB1-202ENST00000403807 ORM2P19652 201 aa10.28□□□□□ -0.76
VPREB1-202ENST00000403807 ZNF546Q86UE3 836 aa10.28□□□□□ -0.76
VPREB1-202ENST00000403807 SLC45A2Q9UMX9 530 aa10.28□□□□□ -0.76
VPREB1-202ENST00000403807 WDR83OSQ9Y284 106 aa10.28□□□□□ -0.76
VPREB1-202ENST00000403807 IGKV3-7A0A075B6H7 116 aa10.27□□□□□ -0.77
VPREB1-202ENST00000403807 HELTA6NFD8 242 aa10.27□□□□□ -0.77
VPREB1-202ENST00000403807 HYPMO75409 117 aa10.27□□□□□ -0.77
VPREB1-202ENST00000403807 CD7P09564 240 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms