RNA–Protein interactions for RNA: ENST00000403276.7

CSNK1D-205, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-205ENST00000403276 MAGT1Q9H0U3 335 aa12.45□□□□□ -0.42
CSNK1D-205ENST00000403276 VSIRQ9H7M9 311 aa12.45□□□□□ -0.42
CSNK1D-205ENST00000403276 NPPCP23582 126 aa12.44□□□□□ -0.42
CSNK1D-205ENST00000403276 RNASEH2CQ8TDP1 164 aaKnown RBP12.44□□□□□ -0.42
CSNK1D-205ENST00000403276 AGRNO00468 2067 aa12.44□□□□□ -0.42
CSNK1D-205ENST00000403276 TRAV30A0A087WSZ9 112 aa12.43□□□□□ -0.42
CSNK1D-205ENST00000403276 A0A1B0GVG6 124 aa12.43□□□□□ -0.42
CSNK1D-205ENST00000403276 K7EPK0 472 aa12.43□□□□□ -0.42
CSNK1D-205ENST00000403276 WRBO00258 174 aa12.43□□□□□ -0.42
CSNK1D-205ENST00000403276 IGLC1P0CG04 106 aa12.43□□□□□ -0.42
CSNK1D-205ENST00000403276 SLC25A4P12235 298 aa12.43□□□□□ -0.42
CSNK1D-205ENST00000403276 OR10J1P30954 320 aa12.43□□□□□ -0.42
CSNK1D-205ENST00000403276 RPL11P62913 178 aaKnown RBP12.43□□□□□ -0.42
CSNK1D-205ENST00000403276 RAB32Q13637 225 aa12.43□□□□□ -0.42
CSNK1D-205ENST00000403276 NPIPB3Q92617 1050 aa12.43□□□□□ -0.42
CSNK1D-205ENST00000403276 MS4A6AQ9H2W1 248 aa12.43□□□□□ -0.42
CSNK1D-205ENST00000403276 RCL1Q9Y2P8 373 aaKnown RBP12.43□□□□□ -0.42
CSNK1D-205ENST00000403276 TENM2Q9NT68 2774 aa12.42□□□□□ -0.42
CSNK1D-205ENST00000403276 hCG_2014768A0A024R1R8 64 aa12.42□□□□□ -0.42
CSNK1D-205ENST00000403276 DNASE2O00115 360 aaPredicted RBP12.42□□□□□ -0.42
CSNK1D-205ENST00000403276 SSSCA1O60232 199 aa12.42□□□□□ -0.42
CSNK1D-205ENST00000403276 IAPPP10997 89 aa12.42□□□□□ -0.42
CSNK1D-205ENST00000403276 BMI1P35226 326 aa12.42□□□□□ -0.42
CSNK1D-205ENST00000403276 APOC4P55056 127 aa12.42□□□□□ -0.42
CSNK1D-205ENST00000403276 PAFAH1B2P68402 229 aa12.42□□□□□ -0.42
CSNK1D-205ENST00000403276 OR1S2Q8NGQ3 325 aa12.42□□□□□ -0.42
CSNK1D-205ENST00000403276 CHAC2Q8WUX2 184 aa12.42□□□□□ -0.42
CSNK1D-205ENST00000403276 PPP1R1CQ8WVI7 109 aa12.42□□□□□ -0.42
CSNK1D-205ENST00000403276 ASB13Q8WXK3 278 aa12.42□□□□□ -0.42
CSNK1D-205ENST00000403276 ACY3Q96HD9 319 aa12.42□□□□□ -0.42
CSNK1D-205ENST00000403276 CIB3Q96Q77 187 aaPredicted RBP12.42□□□□□ -0.42
CSNK1D-205ENST00000403276 METTL26Q96S19 204 aa12.42□□□□□ -0.42
CSNK1D-205ENST00000403276 MAP6D1Q9H9H5 199 aa12.42□□□□□ -0.42
CSNK1D-205ENST00000403276 LSM5Q9Y4Y9 91 aaKnown RBP12.42□□□□□ -0.42
CSNK1D-205ENST00000403276 U3KQ87 197 aa12.42□□□□□ -0.42
CSNK1D-205ENST00000403276 DYNC2H1Q8NCM8 4307 aaKnown RBP12.42□□□□□ -0.42
CSNK1D-205ENST00000403276 SCGB2A1O75556 95 aa12.41□□□□□ -0.42
CSNK1D-205ENST00000403276 GIPP09681 153 aaPredicted RBP12.41□□□□□ -0.42
CSNK1D-205ENST00000403276 CRYBB3P26998 211 aa12.41□□□□□ -0.42
CSNK1D-205ENST00000403276 PAX9P55771 341 aa12.41□□□□□ -0.42
CSNK1D-205ENST00000403276 S100A10P60903 97 aa12.41□□□□□ -0.42
CSNK1D-205ENST00000403276 DEFB135Q30KP9 77 aa12.41□□□□□ -0.42
CSNK1D-205ENST00000403276 ETFRF1Q6IPR1 90 aa12.41□□□□□ -0.42
CSNK1D-205ENST00000403276 NOXA1Q86UR1 476 aa12.41□□□□□ -0.42
CSNK1D-205ENST00000403276 FAM24BQ8N5W8 94 aa12.41□□□□□ -0.42
CSNK1D-205ENST00000403276 Q8WTZ3 238 aa12.41□□□□□ -0.42
CSNK1D-205ENST00000403276 RAB40CQ96S21 281 aa12.41□□□□□ -0.42
CSNK1D-205ENST00000403276 C11orf1Q9H5F2 150 aa12.41□□□□□ -0.42
CSNK1D-205ENST00000403276 A0A1W2PS18 150 aa12.4□□□□□ -0.42
CSNK1D-205ENST00000403276 IFNA4P05014 189 aa12.4□□□□□ -0.42
CSNK1D-205ENST00000403276 CD5P06127 495 aa12.4□□□□□ -0.42
CSNK1D-205ENST00000403276 YPEL3P61236 119 aaPredicted RBP12.4□□□□□ -0.42
CSNK1D-205ENST00000403276 LRRC37A5PQ49AS3 106 aa12.4□□□□□ -0.42
CSNK1D-205ENST00000403276 STPG3Q8N7X2 389 aa12.4□□□□□ -0.42
CSNK1D-205ENST00000403276 SMIM8Q96KF7 97 aa12.4□□□□□ -0.42
CSNK1D-205ENST00000403276 TMEM231Q9H6L2 316 aa12.4□□□□□ -0.42
CSNK1D-205ENST00000403276 RABAC1Q9UI14 185 aa12.4□□□□□ -0.42
CSNK1D-205ENST00000403276 SACSQ9NZJ4 4579 aa12.39□□□□□ -0.43
CSNK1D-205ENST00000403276 SPRY2O43597 315 aa12.39□□□□□ -0.43
CSNK1D-205ENST00000403276 DEDDO75618 318 aa12.39□□□□□ -0.43
CSNK1D-205ENST00000403276 MPC2O95563 127 aa12.39□□□□□ -0.43
CSNK1D-205ENST00000403276 P2RY1P47900 373 aa12.39□□□□□ -0.43
CSNK1D-205ENST00000403276 CMC4P56277 68 aaPredicted RBP12.39□□□□□ -0.43
CSNK1D-205ENST00000403276 TAS2R30P59541 319 aa12.39□□□□□ -0.43
CSNK1D-205ENST00000403276 RAP2BP61225 183 aa12.39□□□□□ -0.43
CSNK1D-205ENST00000403276 LEMD1Q68G75 181 aa12.39□□□□□ -0.43
CSNK1D-205ENST00000403276 Q6ZWC4 215 aa12.39□□□□□ -0.43
CSNK1D-205ENST00000403276 STXBP6Q8NFX7 210 aa12.39□□□□□ -0.43
CSNK1D-205ENST00000403276 PSENENQ9NZ42 101 aa12.39□□□□□ -0.43
CSNK1D-205ENST00000403276 LYSTQ99698 3801 aa12.39□□□□□ -0.43
CSNK1D-205ENST00000403276 KIR2DL5BA0A0G2JN68 375 aa12.38□□□□□ -0.43
CSNK1D-205ENST00000403276 KIR2DL5BA0A0G2JPC4 375 aa12.38□□□□□ -0.43
CSNK1D-205ENST00000403276 H0YIZ8 118 aa12.38□□□□□ -0.43
CSNK1D-205ENST00000403276 H3BP45 60 aa12.38□□□□□ -0.43
CSNK1D-205ENST00000403276 L7N2F9 121 aa12.38□□□□□ -0.43
CSNK1D-205ENST00000403276 UBE2CO00762 179 aa12.38□□□□□ -0.43
CSNK1D-205ENST00000403276 PVALBP20472 110 aaPredicted RBP12.38□□□□□ -0.43
CSNK1D-205ENST00000403276 BCAP31P51572 246 aa12.38□□□□□ -0.43
CSNK1D-205ENST00000403276 ATP5IP56385 69 aaPredicted RBP12.38□□□□□ -0.43
CSNK1D-205ENST00000403276 DEFB131AP59861 70 aa12.38□□□□□ -0.43
CSNK1D-205ENST00000403276 VAMP2P63027 116 aa12.38□□□□□ -0.43
CSNK1D-205ENST00000403276 USF2Q15853 346 aaPredicted RBP12.38□□□□□ -0.43
CSNK1D-205ENST00000403276 KIR2DL5AQ8N109 375 aa12.38□□□□□ -0.43
CSNK1D-205ENST00000403276 KIR2DL5BQ8NHK3 375 aa12.38□□□□□ -0.43
CSNK1D-205ENST00000403276 OR5AC2Q9NZP5 309 aa12.38□□□□□ -0.43
CSNK1D-205ENST00000403276 PAIP2BQ9ULR5 123 aaKnown RBP12.38□□□□□ -0.43
CSNK1D-205ENST00000403276 U3KQE9 123 aa12.38□□□□□ -0.43
CSNK1D-205ENST00000403276 RYR2Q92736 4967 aa12.38□□□□□ -0.43
CSNK1D-205ENST00000403276 TSC22D2O75157 780 aa12.37□□□□□ -0.43
CSNK1D-205ENST00000403276 TOMM40O96008 361 aa12.37□□□□□ -0.43
CSNK1D-205ENST00000403276 RLN2P04090 185 aa12.37□□□□□ -0.43
CSNK1D-205ENST00000403276 IL4P05112 153 aa12.37□□□□□ -0.43
CSNK1D-205ENST00000403276 HNRNPCP07910 306 aaKnown RBP eCLIP12.37□□□□□ -0.432e-7■■□□□ 13.4
CSNK1D-205ENST00000403276 RD3LP0DJH9 198 aa12.37□□□□□ -0.43
CSNK1D-205ENST00000403276 RPP30P78346 268 aaKnown RBP12.37□□□□□ -0.43
CSNK1D-205ENST00000403276 GAMTQ14353 236 aa12.37□□□□□ -0.43
CSNK1D-205ENST00000403276 SPANXN5Q5MJ07 72 aa12.37□□□□□ -0.43
CSNK1D-205ENST00000403276 RNF183Q96D59 192 aa12.37□□□□□ -0.43
CSNK1D-205ENST00000403276 NARS2Q96I59 477 aaKnown RBP12.37□□□□□ -0.43
CSNK1D-205ENST00000403276 RNF126Q9BV68 326 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms