RNA–Protein interactions for RNA: ENST00000401394.5

CTCF-202, Transcript of CCCTC-binding factor, humanhuman

TSL 1 (best) BASIC

Gene CTCF, Length 2,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-202ENST00000401394 C7orf69Q9H7B7 122 aa16.88■□□□□ 0.29
CTCF-202ENST00000401394 H0YJW9 148 aa16.87■□□□□ 0.29
CTCF-202ENST00000401394 RBX1P62877 108 aa16.87■□□□□ 0.29
CTCF-202ENST00000401394 MRPL52Q86TS9 123 aaKnown RBP16.87■□□□□ 0.29
CTCF-202ENST00000401394 RBMXL3Q8N7X1 1067 aaKnown RBP16.87■□□□□ 0.29
CTCF-202ENST00000401394 LOXL4Q96JB6 756 aa16.87■□□□□ 0.29
CTCF-202ENST00000401394 ASCL3Q9NQ33 180 aa16.87■□□□□ 0.29
CTCF-202ENST00000401394 COX11Q9Y6N1 276 aa16.87■□□□□ 0.29
CTCF-202ENST00000401394 IGHV2-26A0A0B4J1V2 119 aa16.87■□□□□ 0.29
CTCF-202ENST00000401394 KLK10O43240 276 aa16.87■□□□□ 0.29
CTCF-202ENST00000401394 POU2AF1Q16633 256 aa16.87■□□□□ 0.29
CTCF-202ENST00000401394 GRAMD2BQ96HH9 432 aa16.87■□□□□ 0.29
CTCF-202ENST00000401394 A0A1W2PRD5 423 aa16.86■□□□□ 0.29
CTCF-202ENST00000401394 A0A1W2PRF3 423 aa16.86■□□□□ 0.29
CTCF-202ENST00000401394 A0A1W2PRM7 423 aa16.86■□□□□ 0.29
CTCF-202ENST00000401394 OR4C46A6NHA9 309 aa16.86■□□□□ 0.29
CTCF-202ENST00000401394 RPL19P84098 196 aaKnown RBP16.86■□□□□ 0.29
CTCF-202ENST00000401394 CIARTQ8N365 385 aaPredicted RBP16.86■□□□□ 0.29
CTCF-202ENST00000401394 DEFB109BQ30KR1 87 aa16.86■□□□□ 0.29
CTCF-202ENST00000401394 ABCA4P78363 2273 aa16.86■□□□□ 0.29
CTCF-202ENST00000401394 DLL1O00548 723 aa16.86■□□□□ 0.29
CTCF-202ENST00000401394 LYPD2Q6UXB3 125 aa16.86■□□□□ 0.29
CTCF-202ENST00000401394 OR1L8Q8NGR8 309 aa16.86■□□□□ 0.29
CTCF-202ENST00000401394 ZGRF1Q86YA3 2104 aa16.85■□□□□ 0.29
CTCF-202ENST00000401394 ENSAO43768 121 aaKnown RBP16.85■□□□□ 0.29
CTCF-202ENST00000401394 CFHR2P36980 270 aa16.85■□□□□ 0.29
CTCF-202ENST00000401394 KLHDC1Q8N7A1 406 aa16.85■□□□□ 0.29
CTCF-202ENST00000401394 C1orf162Q8NEQ5 155 aaPredicted RBP16.85■□□□□ 0.29
CTCF-202ENST00000401394 FLYWCH2Q96CP2 140 aaKnown RBP16.85■□□□□ 0.29
CTCF-202ENST00000401394 IGHV1-24A0A0C4DH33 117 aa16.85■□□□□ 0.29
CTCF-202ENST00000401394 CBY3A6NI87 242 aa16.85■□□□□ 0.29
CTCF-202ENST00000401394 ERHP84090 104 aaKnown RBP16.85■□□□□ 0.29
CTCF-202ENST00000401394 ZNF788Q6ZQV5 615 aa16.85■□□□□ 0.29
CTCF-202ENST00000401394 BET1LQ9NYM9 111 aa16.85■□□□□ 0.29
CTCF-202ENST00000401394 WASHC3Q9Y3C0 194 aa16.85■□□□□ 0.29
CTCF-202ENST00000401394 A0A1W2PPI3 338 aa16.84■□□□□ 0.29
CTCF-202ENST00000401394 IGLC7A0M8Q6 106 aa16.84■□□□□ 0.29
CTCF-202ENST00000401394 EPDR1Q9UM22 224 aa16.84■□□□□ 0.29
CTCF-202ENST00000401394 ZNF835Q9Y2P0 537 aa16.84■□□□□ 0.29
CTCF-202ENST00000401394 MALRD1Q5VYJ5 2156 aa16.84■□□□□ 0.29
CTCF-202ENST00000401394 FXYD7P58549 80 aa16.84■□□□□ 0.29
CTCF-202ENST00000401394 TMEM177Q53S58 311 aa16.84■□□□□ 0.29
CTCF-202ENST00000401394 EXOC3-AS1Q8N2X6 119 aa16.84■□□□□ 0.29
CTCF-202ENST00000401394 SARAFQ96BY9 339 aa16.84■□□□□ 0.29
CTCF-202ENST00000401394 PPP1R14DQ9NXH3 145 aa16.84■□□□□ 0.29
CTCF-202ENST00000401394 MRPL27Q9P0M9 148 aaKnown RBP16.84■□□□□ 0.29
CTCF-202ENST00000401394 NKX6-3A6NJ46 265 aa16.83■□□□□ 0.29
CTCF-202ENST00000401394 NUDT3O95989 172 aa16.83■□□□□ 0.29
CTCF-202ENST00000401394 GLRXP35754 106 aa16.83■□□□□ 0.29
CTCF-202ENST00000401394 OR2T8A6NH00 312 aa16.83■□□□□ 0.28
CTCF-202ENST00000401394 UBE2V1Q13404 147 aa16.83■□□□□ 0.28
CTCF-202ENST00000401394 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.83■□□□□ 0.28
CTCF-202ENST00000401394 ZNF596Q8TC21 504 aa16.83■□□□□ 0.28
CTCF-202ENST00000401394 ADTRPQ96IZ2 230 aa16.83■□□□□ 0.28
CTCF-202ENST00000401394 WNK2Q9Y3S1 2297 aa16.83■□□□□ 0.28
CTCF-202ENST00000401394 MUC21A0A0G2JKD1 596 aa16.83■□□□□ 0.28
CTCF-202ENST00000401394 MUC21A0A140T8X8 626 aa16.83■□□□□ 0.28
CTCF-202ENST00000401394 VAMP3Q15836 100 aa16.83■□□□□ 0.28
CTCF-202ENST00000401394 MUC21Q5SSG8 566 aa16.83■□□□□ 0.28
CTCF-202ENST00000401394 TMEM200BQ69YZ2 307 aa16.83■□□□□ 0.28
CTCF-202ENST00000401394 PDPNQ86YL7 162 aa16.83■□□□□ 0.28
CTCF-202ENST00000401394 ZFHX3Q15911 3703 aa16.82■□□□□ 0.28
CTCF-202ENST00000401394 OTOGLQ3ZCN5 2332 aa16.82■□□□□ 0.28
CTCF-202ENST00000401394 SPAARA0A1B0GVQ0 90 aa16.82■□□□□ 0.28
CTCF-202ENST00000401394 TCRBV4S1A1TA0A5B7 111 aa16.82■□□□□ 0.28
CTCF-202ENST00000401394 TEX45Q8NA69 505 aa16.82■□□□□ 0.28
CTCF-202ENST00000401394 A0A087X0K7 114 aa16.82■□□□□ 0.28
CTCF-202ENST00000401394 K7EM74 188 aa16.82■□□□□ 0.28
CTCF-202ENST00000401394 ZNF738Q8NE65 137 aa16.82■□□□□ 0.28
CTCF-202ENST00000401394 OR10X1Q8NGY0 326 aa16.82■□□□□ 0.28
CTCF-202ENST00000401394 ORAOV1Q8WV07 137 aa16.82■□□□□ 0.28
CTCF-202ENST00000401394 CCL17Q92583 94 aa16.82■□□□□ 0.28
CTCF-202ENST00000401394 TMEM70Q9BUB7 260 aa16.82■□□□□ 0.28
CTCF-202ENST00000401394 FAM215AQ9Y5M1 114 aa16.82■□□□□ 0.28
CTCF-202ENST00000401394 A0A1B0GXF2 115 aa16.81■□□□□ 0.28
CTCF-202ENST00000401394 MZT1Q08AG7 82 aa16.81■□□□□ 0.28
CTCF-202ENST00000401394 FBLN7Q53RD9 439 aa16.81■□□□□ 0.28
CTCF-202ENST00000401394 FAM222BQ8WU58 562 aa16.81■□□□□ 0.28
CTCF-202ENST00000401394 ARHGAP32A7KAX9 2087 aa16.81■□□□□ 0.28
CTCF-202ENST00000401394 FNDC10F2Z333 226 aa16.81■□□□□ 0.28
CTCF-202ENST00000401394 CRYABP02511 175 aaKnown RBP16.81■□□□□ 0.28
CTCF-202ENST00000401394 ETFRF1Q6IPR1 90 aa16.81■□□□□ 0.28
CTCF-202ENST00000401394 MUC15Q8N387 334 aa16.81■□□□□ 0.28
CTCF-202ENST00000401394 C17orf77Q96MU5 243 aa16.81■□□□□ 0.28
CTCF-202ENST00000401394 TPPP3Q9BW30 176 aa16.81■□□□□ 0.28
CTCF-202ENST00000401394 SH3BGRL2Q9UJC5 107 aa16.81■□□□□ 0.28
CTCF-202ENST00000401394 S4R3C0 116 aa16.81■□□□□ 0.28
CTCF-202ENST00000401394 hADV38S2A0JD32 116 aa16.8■□□□□ 0.28
CTCF-202ENST00000401394 NBEAP1P0C6P0 100 aa16.8■□□□□ 0.28
CTCF-202ENST00000401394 ZNF833PQ6ZTB9 187 aa16.8■□□□□ 0.28
CTCF-202ENST00000401394 WIPF2Q8TF74 440 aaPredicted RBP16.8■□□□□ 0.28
CTCF-202ENST00000401394 ZNF714Q96N38 554 aa16.8■□□□□ 0.28
CTCF-202ENST00000401394 MRPL32Q9BYC8 188 aaKnown RBP16.8■□□□□ 0.28
CTCF-202ENST00000401394 MRPS16Q9Y3D3 137 aaKnown RBP16.8■□□□□ 0.28
CTCF-202ENST00000401394 ZFHX2Q9C0A1 2572 aaPredicted RBP16.8■□□□□ 0.28
CTCF-202ENST00000401394 FAM106CPP0CH98 169 aa16.8■□□□□ 0.28
CTCF-202ENST00000401394 MYCNOSP40205 109 aa16.8■□□□□ 0.28
CTCF-202ENST00000401394 FAM106AQ4KMX7 169 aa16.8■□□□□ 0.28
CTCF-202ENST00000401394 IGLV2-23P01705 113 aa16.8■□□□□ 0.28
CTCF-202ENST00000401394 APOA2P02652 100 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms