RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 MLANAQ16655 118 aa11.32□□□□□ -0.6
CACNA1C-211ENST00000399617 FMC1Q96HJ9 113 aa11.32□□□□□ -0.6
CACNA1C-211ENST00000399617 RPP21Q9H633 154 aaKnown RBP11.32□□□□□ -0.6
CACNA1C-211ENST00000399617 SPTBN2O15020 2390 aa11.32□□□□□ -0.6
CACNA1C-211ENST00000399617 APOMO95445 188 aa11.31□□□□□ -0.6
CACNA1C-211ENST00000399617 RSPO3Q9BXY4 272 aaPredicted RBP11.31□□□□□ -0.6
CACNA1C-211ENST00000399617 RCC1LQ96I51 464 aaKnown RBP11.31□□□□□ -0.6
CACNA1C-211ENST00000399617 C19orf24Q9BVV8 132 aa11.31□□□□□ -0.6
CACNA1C-211ENST00000399617 PRDM13Q9H4Q3 707 aa11.31□□□□□ -0.6
CACNA1C-211ENST00000399617 ARHGEF17Q96PE2 2063 aaPredicted RBP11.31□□□□□ -0.6
CACNA1C-211ENST00000399617 WISP1O95388 367 aa11.31□□□□□ -0.6
CACNA1C-211ENST00000399617 HIST1H2BAQ96A08 127 aa11.31□□□□□ -0.6
CACNA1C-211ENST00000399617 MRPS16Q9Y3D3 137 aaKnown RBP11.31□□□□□ -0.6
CACNA1C-211ENST00000399617 A0A087WWL8 130 aa11.31□□□□□ -0.6
CACNA1C-211ENST00000399617 IFI6P09912 130 aa11.31□□□□□ -0.6
CACNA1C-211ENST00000399617 SEPSECSQ9HD40 501 aaKnown RBP11.31□□□□□ -0.6
CACNA1C-211ENST00000399617 PEF1Q9UBV8 284 aaKnown RBP11.31□□□□□ -0.6
CACNA1C-211ENST00000399617 HOXA5P20719 270 aa11.31□□□□□ -0.6
CACNA1C-211ENST00000399617 OR11H1Q8NG94 326 aa11.31□□□□□ -0.6
CACNA1C-211ENST00000399617 KLK9Q9UKQ9 250 aa11.31□□□□□ -0.6
CACNA1C-211ENST00000399617 GREB1Q4ZG55 1949 aa11.31□□□□□ -0.6
CACNA1C-211ENST00000399617 TRGV11A0A075B6L2 103 aa11.31□□□□□ -0.6
CACNA1C-211ENST00000399617 FABP5P3A8MUU1 101 aa11.31□□□□□ -0.6
CACNA1C-211ENST00000399617 FAM19A2Q8N3H0 131 aa11.31□□□□□ -0.6
CACNA1C-211ENST00000399617 RHPN1-AS1Q9BWJ2 59 aa11.31□□□□□ -0.6
CACNA1C-211ENST00000399617 IGKV1D-17A0A075B6S4 117 aa11.3□□□□□ -0.6
CACNA1C-211ENST00000399617 ERASQ7Z444 233 aa11.3□□□□□ -0.6
CACNA1C-211ENST00000399617 PSG1P11464 419 aa11.3□□□□□ -0.6
CACNA1C-211ENST00000399617 PAX9P55771 341 aa11.3□□□□□ -0.6
CACNA1C-211ENST00000399617 B3GALT5-AS1P59052 145 aa11.3□□□□□ -0.6
CACNA1C-211ENST00000399617 CKS1BP61024 79 aa11.3□□□□□ -0.6
CACNA1C-211ENST00000399617 TCF23Q7RTU1 214 aa11.3□□□□□ -0.6
CACNA1C-211ENST00000399617 OTORQ9NRC9 128 aa11.3□□□□□ -0.6
CACNA1C-211ENST00000399617 LY6G6EA0A0G2JKS1 128 aa11.3□□□□□ -0.6
CACNA1C-211ENST00000399617 LINC01619G3V211 115 aa11.3□□□□□ -0.6
CACNA1C-211ENST00000399617 ATP6V0E1O15342 81 aa11.3□□□□□ -0.6
CACNA1C-211ENST00000399617 ZNF660Q6AZW8 331 aaPredicted RBP11.3□□□□□ -0.6
CACNA1C-211ENST00000399617 TTC9CQ8N5M4 171 aa11.3□□□□□ -0.6
CACNA1C-211ENST00000399617 PSG8Q9UQ74 426 aa11.3□□□□□ -0.6
CACNA1C-211ENST00000399617 ZNF257Q9Y2Q1 563 aa11.3□□□□□ -0.6
CACNA1C-211ENST00000399617 U3KQA8 63 aa11.3□□□□□ -0.6
CACNA1C-211ENST00000399617 CACNA1IQ9P0X4 2223 aa11.3□□□□□ -0.6
CACNA1C-211ENST00000399617 IGHV4-39P01824 125 aa11.3□□□□□ -0.6
CACNA1C-211ENST00000399617 HGFACQ04756 655 aa11.3□□□□□ -0.6
CACNA1C-211ENST00000399617 ZNF345Q14585 488 aa11.3□□□□□ -0.6
CACNA1C-211ENST00000399617 RNF182Q8N6D2 247 aa11.3□□□□□ -0.6
CACNA1C-211ENST00000399617 NYNRINQ9P2P1 1898 aaKnown RBP11.29□□□□□ -0.6
CACNA1C-211ENST00000399617 DAD1P61803 113 aa11.29□□□□□ -0.6
CACNA1C-211ENST00000399617 PLA2G2CQ5R387 149 aa11.29□□□□□ -0.6
CACNA1C-211ENST00000399617 PVRIGQ6DKI7 326 aa11.29□□□□□ -0.6
CACNA1C-211ENST00000399617 HLA-DQA1P01909 254 aa11.29□□□□□ -0.6
CACNA1C-211ENST00000399617 DEFB136Q30KP8 78 aa11.29□□□□□ -0.6
CACNA1C-211ENST00000399617 COL6A6A6NMZ7 2263 aa11.29□□□□□ -0.6
CACNA1C-211ENST00000399617 IGLV3-32A0A0A0MS00 114 aa11.29□□□□□ -0.6
CACNA1C-211ENST00000399617 SRRM5B3KS81 715 aa11.29□□□□□ -0.6
CACNA1C-211ENST00000399617 E9PQ18 207 aa11.29□□□□□ -0.6
CACNA1C-211ENST00000399617 NCR2O95944 276 aa11.29□□□□□ -0.6
CACNA1C-211ENST00000399617 HOXD3P31249 432 aaPredicted RBP11.29□□□□□ -0.6
CACNA1C-211ENST00000399617 C5orf64Q2M2E5 130 aa11.29□□□□□ -0.6
CACNA1C-211ENST00000399617 ZMAT4Q9H898 229 aa11.29□□□□□ -0.6
CACNA1C-211ENST00000399617 DKK1O94907 266 aa11.28□□□□□ -0.6
CACNA1C-211ENST00000399617 ZNF414Q96IQ9 312 aa11.28□□□□□ -0.6
CACNA1C-211ENST00000399617 SLC50A1Q9BRV3 221 aa11.28□□□□□ -0.6
CACNA1C-211ENST00000399617 ALX4Q9H161 411 aaPredicted RBP11.28□□□□□ -0.6
CACNA1C-211ENST00000399617 COPS9Q8WXC6 57 aa11.28□□□□□ -0.6
CACNA1C-211ENST00000399617 IGHV1-69DA0A0B4J2H0 117 aa11.28□□□□□ -0.6
CACNA1C-211ENST00000399617 IGHV1-69P01742 117 aa11.28□□□□□ -0.6
CACNA1C-211ENST00000399617 IFI27P40305 119 aaPredicted RBP11.28□□□□□ -0.6
CACNA1C-211ENST00000399617 TICRRQ7Z2Z1 1910 aa11.28□□□□□ -0.6
CACNA1C-211ENST00000399617 NPDC1Q9NQX5 325 aaPredicted RBP11.28□□□□□ -0.6
CACNA1C-211ENST00000399617 LINC00862A6NCI5 91 aa11.28□□□□□ -0.6
CACNA1C-211ENST00000399617 HIGD1CA8MV81 97 aa11.28□□□□□ -0.6
CACNA1C-211ENST00000399617 SPSB3Q6PJ21 355 aa11.28□□□□□ -0.6
CACNA1C-211ENST00000399617 C17orf82Q86X59 251 aaPredicted RBP11.28□□□□□ -0.6
CACNA1C-211ENST00000399617 LYPD3O95274 346 aa11.28□□□□□ -0.6
CACNA1C-211ENST00000399617 ZNF876PQ49A33 203 aa11.28□□□□□ -0.6
CACNA1C-211ENST00000399617 VSIRQ9H7M9 311 aa11.28□□□□□ -0.6
CACNA1C-211ENST00000399617 TRAV2A0A0B4J234 112 aa11.27□□□□□ -0.6
CACNA1C-211ENST00000399617 H0YJW9 148 aa11.27□□□□□ -0.6
CACNA1C-211ENST00000399617 GPX4P36969 197 aaPredicted RBP11.27□□□□□ -0.6
CACNA1C-211ENST00000399617 TMEM95Q3KNT9 176 aa11.27□□□□□ -0.6
CACNA1C-211ENST00000399617 LCTP09848 1927 aa11.27□□□□□ -0.6
CACNA1C-211ENST00000399617 RALGAPA1Q6GYQ0 2036 aa11.27□□□□□ -0.6
CACNA1C-211ENST00000399617 PAPPA-AS1Q5QFB9 102 aa11.27□□□□□ -0.61
CACNA1C-211ENST00000399617 S100A7L2Q5SY68 101 aa11.27□□□□□ -0.61
CACNA1C-211ENST00000399617 MINOS1Q5TGZ0 78 aa11.27□□□□□ -0.61
CACNA1C-211ENST00000399617 CST9LQ9H4G1 147 aa11.27□□□□□ -0.61
CACNA1C-211ENST00000399617 MINOS1-NBL1R4GNA1 71 aa11.27□□□□□ -0.61
CACNA1C-211ENST00000399617 TRAV12-2A0A075B6T6 113 aa11.27□□□□□ -0.61
CACNA1C-211ENST00000399617 A0A1B0GUT8 65 aa11.27□□□□□ -0.61
CACNA1C-211ENST00000399617 CLPSL2Q6UWE3 100 aa11.27□□□□□ -0.61
CACNA1C-211ENST00000399617 HEATR5BQ9P2D3 2071 aa11.27□□□□□ -0.61
CACNA1C-211ENST00000399617 THSD7BQ9C0I4 1608 aa11.27□□□□□ -0.61
CACNA1C-211ENST00000399617 GAGE12BA1L429 117 aa11.27□□□□□ -0.61
CACNA1C-211ENST00000399617 GAGE7O76087 117 aa11.27□□□□□ -0.61
CACNA1C-211ENST00000399617 GAGE12FP0CL80 117 aa11.27□□□□□ -0.61
CACNA1C-211ENST00000399617 GAGE12GP0CL81 117 aa11.27□□□□□ -0.61
CACNA1C-211ENST00000399617 GAGE12IP0CL82 117 aa11.27□□□□□ -0.61
CACNA1C-211ENST00000399617 SSBP2P81877 361 aaPredicted RBP11.27□□□□□ -0.61
CACNA1C-211ENST00000399617 HEPN1Q6WQI6 88 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms