RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 NRARPQ7Z6K4 114 aa10.48□□□□□ -0.73
HLA-DQB1-202ENST00000399079 MS4A6AQ9H2W1 248 aa10.48□□□□□ -0.73
HLA-DQB1-202ENST00000399079 RETNQ9HD89 108 aa10.48□□□□□ -0.73
HLA-DQB1-202ENST00000399079 RCL1Q9Y2P8 373 aaKnown RBP10.48□□□□□ -0.73
HLA-DQB1-202ENST00000399079 A0A1W2PS18 150 aa10.47□□□□□ -0.73
HLA-DQB1-202ENST00000399079 CCNKO75909 580 aa10.47□□□□□ -0.73
HLA-DQB1-202ENST00000399079 MBPP02686 304 aaPredicted RBP10.47□□□□□ -0.73
HLA-DQB1-202ENST00000399079 P2RY1P47900 373 aa10.47□□□□□ -0.73
HLA-DQB1-202ENST00000399079 APRG1Q8IVJ8 170 aa10.47□□□□□ -0.73
HLA-DQB1-202ENST00000399079 OR51G1Q8NGK1 321 aa10.47□□□□□ -0.73
HLA-DQB1-202ENST00000399079 SMIM8Q96KF7 97 aa10.47□□□□□ -0.73
HLA-DQB1-202ENST00000399079 U3KQE9 123 aa10.47□□□□□ -0.73
HLA-DQB1-202ENST00000399079 C5orf51A6NDU8 294 aa10.46□□□□□ -0.74
HLA-DQB1-202ENST00000399079 CD5P06127 495 aa10.46□□□□□ -0.74
HLA-DQB1-202ENST00000399079 HNRNPCP07910 306 aaKnown RBP eCLIP10.46□□□□□ -0.74
HLA-DQB1-202ENST00000399079 OR2F1Q13607 317 aa10.46□□□□□ -0.74
HLA-DQB1-202ENST00000399079 OR8G2PQ6IF36 304 aa10.46□□□□□ -0.74
HLA-DQB1-202ENST00000399079 ACOT7LQ6ZUV0 252 aa10.46□□□□□ -0.74
HLA-DQB1-202ENST00000399079 RNF125Q96EQ8 232 aa10.46□□□□□ -0.74
HLA-DQB1-202ENST00000399079 SPATA25Q9BR10 227 aa10.46□□□□□ -0.74
HLA-DQB1-202ENST00000399079 PBDC1Q9BVG4 233 aa10.46□□□□□ -0.74
HLA-DQB1-202ENST00000399079 TMEM231Q9H6L2 316 aa10.46□□□□□ -0.74
HLA-DQB1-202ENST00000399079 C7orf66A4D0T2 115 aa10.45□□□□□ -0.74
HLA-DQB1-202ENST00000399079 PMS2P5A8MQ11 134 aa10.45□□□□□ -0.74
HLA-DQB1-202ENST00000399079 DNASE2O00115 360 aaPredicted RBP10.45□□□□□ -0.74
HLA-DQB1-202ENST00000399079 PAFAH1B2P68402 229 aa10.45□□□□□ -0.74
HLA-DQB1-202ENST00000399079 FAM24BQ8N5W8 94 aa10.45□□□□□ -0.74
HLA-DQB1-202ENST00000399079 NARS2Q96I59 477 aaKnown RBP10.45□□□□□ -0.74
HLA-DQB1-202ENST00000399079 FAM110AQ9BQ89 295 aa10.45□□□□□ -0.74
HLA-DQB1-202ENST00000399079 RABAC1Q9UI14 185 aa10.45□□□□□ -0.74
HLA-DQB1-202ENST00000399079 LOC102724200A0A096LPH7 203 aaPredicted RBP10.44□□□□□ -0.74
HLA-DQB1-202ENST00000399079 BUB3O43684 328 aa10.44□□□□□ -0.74
HLA-DQB1-202ENST00000399079 IL5P05113 134 aa10.44□□□□□ -0.74
HLA-DQB1-202ENST00000399079 METTL15P1P0C7V9 234 aa10.44□□□□□ -0.74
HLA-DQB1-202ENST00000399079 C16orf54Q6UWD8 224 aa10.44□□□□□ -0.74
HLA-DQB1-202ENST00000399079 TMEM14EPQ6UXP3 125 aa10.44□□□□□ -0.74
HLA-DQB1-202ENST00000399079 THAP8Q8NA92 274 aa10.44□□□□□ -0.74
HLA-DQB1-202ENST00000399079 STXBP6Q8NFX7 210 aa10.44□□□□□ -0.74
HLA-DQB1-202ENST00000399079 GRAMD2BQ96HH9 432 aa10.44□□□□□ -0.74
HLA-DQB1-202ENST00000399079 RAB40CQ96S21 281 aa10.44□□□□□ -0.74
HLA-DQB1-202ENST00000399079 TRGV9Q99603 122 aa10.44□□□□□ -0.74
HLA-DQB1-202ENST00000399079 GGTLC1Q9BX51 225 aa10.44□□□□□ -0.74
HLA-DQB1-202ENST00000399079 MAP6D1Q9H9H5 199 aa10.44□□□□□ -0.74
HLA-DQB1-202ENST00000399079 LSM5Q9Y4Y9 91 aaKnown RBP10.44□□□□□ -0.74
HLA-DQB1-202ENST00000399079 SMCO3A2RU48 225 aa10.43□□□□□ -0.74
HLA-DQB1-202ENST00000399079 SNRPGP15A8MWD9 76 aa10.43□□□□□ -0.74
HLA-DQB1-202ENST00000399079 GATA2P23769 480 aaPredicted RBP10.43□□□□□ -0.74
HLA-DQB1-202ENST00000399079 LYZP61626 148 aa10.43□□□□□ -0.74
HLA-DQB1-202ENST00000399079 RRAS2P62070 204 aaPredicted RBP10.43□□□□□ -0.74
HLA-DQB1-202ENST00000399079 AKR1C1Q04828 323 aa10.43□□□□□ -0.74
HLA-DQB1-202ENST00000399079 TMEM182Q6ZP80 229 aaPredicted RBP10.43□□□□□ -0.74
HLA-DQB1-202ENST00000399079 GLMPQ8WWB7 406 aa10.43□□□□□ -0.74
HLA-DQB1-202ENST00000399079 C2orf50Q96LR7 162 aa10.43□□□□□ -0.74
HLA-DQB1-202ENST00000399079 INMT-MINDY4F8WBC2 141 aa10.43□□□□□ -0.74
HLA-DQB1-202ENST00000399079 K7EPK0 472 aa10.43□□□□□ -0.74
HLA-DQB1-202ENST00000399079 TSC22D2O75157 780 aa10.43□□□□□ -0.74
HLA-DQB1-202ENST00000399079 RPL35AP18077 110 aaKnown RBP10.43□□□□□ -0.74
HLA-DQB1-202ENST00000399079 TAS2R30P59541 319 aa10.43□□□□□ -0.74
HLA-DQB1-202ENST00000399079 GSG1LQ6UXU4 331 aa10.43□□□□□ -0.74
HLA-DQB1-202ENST00000399079 STPG3Q8N7X2 389 aa10.43□□□□□ -0.74
HLA-DQB1-202ENST00000399079 FABP1P07148 127 aa10.42□□□□□ -0.74
HLA-DQB1-202ENST00000399079 EIF2B2P49770 351 aaKnown RBP10.42□□□□□ -0.74
HLA-DQB1-202ENST00000399079 DEFA1P59665 94 aa10.42□□□□□ -0.74
HLA-DQB1-202ENST00000399079 DEFA3P59666 94 aa10.42□□□□□ -0.74
HLA-DQB1-202ENST00000399079 DEFB131AP59861 70 aa10.42□□□□□ -0.74
HLA-DQB1-202ENST00000399079 ARL16Q0P5N6 197 aa10.42□□□□□ -0.74
HLA-DQB1-202ENST00000399079 IL15RAQ13261 267 aa10.42□□□□□ -0.74
HLA-DQB1-202ENST00000399079 LEMD1Q68G75 181 aa10.42□□□□□ -0.74
HLA-DQB1-202ENST00000399079 TMEM144Q7Z5S9 345 aa10.42□□□□□ -0.74
HLA-DQB1-202ENST00000399079 DCANP1Q8TF63 244 aa10.42□□□□□ -0.74
HLA-DQB1-202ENST00000399079 MARVELD1Q9BSK0 173 aa10.42□□□□□ -0.74
HLA-DQB1-202ENST00000399079 GPN1Q9HCN4 374 aaPredicted RBP10.42□□□□□ -0.74
HLA-DQB1-202ENST00000399079 DNAH7Q8WXX0 4024 aa10.41□□□□□ -0.74
HLA-DQB1-202ENST00000399079 HELTA6NFD8 242 aa10.41□□□□□ -0.74
HLA-DQB1-202ENST00000399079 K7EQG2 157 aa10.41□□□□□ -0.74
HLA-DQB1-202ENST00000399079 L7N2F9 121 aa10.41□□□□□ -0.74
HLA-DQB1-202ENST00000399079 SIX6O95475 246 aa10.41□□□□□ -0.74
HLA-DQB1-202ENST00000399079 S100A10P60903 97 aa10.41□□□□□ -0.74
HLA-DQB1-202ENST00000399079 VAMP2P63027 116 aa10.41□□□□□ -0.74
HLA-DQB1-202ENST00000399079 SIGLEC15Q6ZMC9 328 aa10.41□□□□□ -0.74
HLA-DQB1-202ENST00000399079 OR10P1Q8NGE3 313 aa10.41□□□□□ -0.74
HLA-DQB1-202ENST00000399079 C11orf1Q9H5F2 150 aa10.41□□□□□ -0.74
HLA-DQB1-202ENST00000399079 TRAV2A0A0B4J234 112 aa10.4□□□□□ -0.74
HLA-DQB1-202ENST00000399079 ZNF688P0C7X2 276 aa10.4□□□□□ -0.74
HLA-DQB1-202ENST00000399079 CMC4P56277 68 aaPredicted RBP10.4□□□□□ -0.74
HLA-DQB1-202ENST00000399079 DLK1P80370 383 aa10.4□□□□□ -0.74
HLA-DQB1-202ENST00000399079 RAB32Q13637 225 aa10.4□□□□□ -0.74
HLA-DQB1-202ENST00000399079 EDA2RQ9HAV5 297 aa10.4□□□□□ -0.74
HLA-DQB1-202ENST00000399079 FAM24AA6NFZ4 105 aa10.39□□□□□ -0.75
HLA-DQB1-202ENST00000399079 GOSR2O14653 212 aa10.39□□□□□ -0.75
HLA-DQB1-202ENST00000399079 PRAF2O60831 178 aa10.39□□□□□ -0.75
HLA-DQB1-202ENST00000399079 ORM2P19652 201 aa10.39□□□□□ -0.75
HLA-DQB1-202ENST00000399079 BCAP31P51572 246 aa10.39□□□□□ -0.75
HLA-DQB1-202ENST00000399079 CAV2P51636 162 aa10.39□□□□□ -0.75
HLA-DQB1-202ENST00000399079 AP2S1P53680 142 aaPredicted RBP10.39□□□□□ -0.75
HLA-DQB1-202ENST00000399079 OVOL2Q9BRP0 275 aa10.39□□□□□ -0.75
HLA-DQB1-202ENST00000399079 NPVFQ9HCQ7 196 aa10.39□□□□□ -0.75
HLA-DQB1-202ENST00000399079 CST7O76096 145 aa10.38□□□□□ -0.75
HLA-DQB1-202ENST00000399079 APOC4P55056 127 aa10.38□□□□□ -0.75
HLA-DQB1-202ENST00000399079 DEFB135Q30KP9 77 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms