RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 CD5LO43866 347 aa7.14□□□□□ -1.27
CTNND1-205ENST00000399050 SLC25A48Q6ZT89 311 aaKnown RBP7.14□□□□□ -1.27
CTNND1-205ENST00000399050 SMPXQ9UHP9 88 aa7.14□□□□□ -1.27
CTNND1-205ENST00000399050 MDC1Q14676 2089 aaKnown RBP7.14□□□□□ -1.27
CTNND1-205ENST00000399050 CFPP27918 469 aa7.13□□□□□ -1.27
CTNND1-205ENST00000399050 ORMDL2Q53FV1 153 aa7.13□□□□□ -1.27
CTNND1-205ENST00000399050 ALPK2Q86TB3 2170 aa7.13□□□□□ -1.27
CTNND1-205ENST00000399050 APOBEC3AP31941 199 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-205ENST00000399050 RPRMLQ8N4K4 120 aa7.13□□□□□ -1.27
CTNND1-205ENST00000399050 FDCSPQ8NFU4 85 aa7.13□□□□□ -1.27
CTNND1-205ENST00000399050 LSM4Q9Y4Z0 139 aaKnown RBP7.13□□□□□ -1.27
CTNND1-205ENST00000399050 Q0VG73 95 aa7.13□□□□□ -1.27
CTNND1-205ENST00000399050 TMEM155Q4W5P6 130 aa7.13□□□□□ -1.27
CTNND1-205ENST00000399050 EXOC3-AS1Q8N2X6 119 aa7.13□□□□□ -1.27
CTNND1-205ENST00000399050 CST9LQ9H4G1 147 aa7.13□□□□□ -1.27
CTNND1-205ENST00000399050 F2Z2F3 143 aa7.13□□□□□ -1.27
CTNND1-205ENST00000399050 PLAURQ03405 335 aa7.13□□□□□ -1.27
CTNND1-205ENST00000399050 CLEC2AQ6UVW9 174 aa7.13□□□□□ -1.27
CTNND1-205ENST00000399050 RP1P56715 2156 aa7.13□□□□□ -1.27
CTNND1-205ENST00000399050 IGKV2-40A0A087WW87 121 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-205ENST00000399050 IGKV3D-20A0A0C4DH25 116 aa7.13□□□□□ -1.27
CTNND1-205ENST00000399050 IGKV2D-40P01614 121 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-205ENST00000399050 PFN1P07737 140 aaKnown RBP7.13□□□□□ -1.27
CTNND1-205ENST00000399050 ZNF138P52744 262 aa7.13□□□□□ -1.27
CTNND1-205ENST00000399050 FOXF2Q12947 444 aa7.13□□□□□ -1.27
CTNND1-205ENST00000399050 OCIAD2Q56VL3 154 aa7.13□□□□□ -1.27
CTNND1-205ENST00000399050 GLMPQ8WWB7 406 aa7.13□□□□□ -1.27
CTNND1-205ENST00000399050 PRTN3P24158 256 aa7.12□□□□□ -1.27
CTNND1-205ENST00000399050 BSPH1Q075Z2 132 aa7.12□□□□□ -1.27
CTNND1-205ENST00000399050 LYZL1Q6UWQ5 148 aa7.12□□□□□ -1.27
CTNND1-205ENST00000399050 BRWD1Q9NSI6 2320 aa7.12□□□□□ -1.27
CTNND1-205ENST00000399050 PINLYPA6NC86 204 aa7.12□□□□□ -1.27
CTNND1-205ENST00000399050 IGLV3-19P01714 112 aa7.12□□□□□ -1.27
CTNND1-205ENST00000399050 GAGE2BQ13066 116 aa7.12□□□□□ -1.27
CTNND1-205ENST00000399050 CD300EQ496F6 205 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-205ENST00000399050 GAGE2EQ4V326 116 aa7.12□□□□□ -1.27
CTNND1-205ENST00000399050 GAGE2DQ9UEU5 116 aa7.12□□□□□ -1.27
CTNND1-205ENST00000399050 TRBV7-9A0A0J9YWB2 115 aa7.12□□□□□ -1.27
CTNND1-205ENST00000399050 C15orf62A8K5M9 175 aa7.12□□□□□ -1.27
CTNND1-205ENST00000399050 NPIPB5A8MRT5 1133 aa7.12□□□□□ -1.27
CTNND1-205ENST00000399050 NBR2O15453 112 aa7.12□□□□□ -1.27
CTNND1-205ENST00000399050 EFEMP2O95967 443 aa7.12□□□□□ -1.27
CTNND1-205ENST00000399050 ADAMTSL5Q6ZMM2 481 aa7.12□□□□□ -1.27
CTNND1-205ENST00000399050 C9orf106Q8NAJ2 232 aa7.12□□□□□ -1.27
CTNND1-205ENST00000399050 SLC50A1Q9BRV3 221 aa7.12□□□□□ -1.27
CTNND1-205ENST00000399050 LTBP1Q14766 1721 aa7.12□□□□□ -1.27
CTNND1-205ENST00000399050 IGHV3-64A0A075B6Q5 118 aa7.12□□□□□ -1.27
CTNND1-205ENST00000399050 TDGF1P13385 188 aa7.12□□□□□ -1.27
CTNND1-205ENST00000399050 CNTFRP26992 372 aa7.12□□□□□ -1.27
CTNND1-205ENST00000399050 IFI27P40305 119 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-205ENST00000399050 Q6ZRM9 215 aa7.12□□□□□ -1.27
CTNND1-205ENST00000399050 TRPM7Q96QT4 1865 aa7.12□□□□□ -1.27
CTNND1-205ENST00000399050 RNF182Q8N6D2 247 aa7.11□□□□□ -1.27
CTNND1-205ENST00000399050 LINC01560Q8TB33 94 aa7.11□□□□□ -1.27
CTNND1-205ENST00000399050 PIMREGQ9BSJ6 248 aa7.11□□□□□ -1.27
CTNND1-205ENST00000399050 SCRT1Q9BWW7 348 aa7.11□□□□□ -1.27
CTNND1-205ENST00000399050 ERG28Q9UKR5 140 aa7.11□□□□□ -1.27
CTNND1-205ENST00000399050 LOC102723996A0A087X1L8 192 aa7.11□□□□□ -1.27
CTNND1-205ENST00000399050 LINC00473A8K010 186 aa7.11□□□□□ -1.27
CTNND1-205ENST00000399050 PSPNO60542 156 aa7.11□□□□□ -1.27
CTNND1-205ENST00000399050 ZNF329Q86UD4 541 aa7.11□□□□□ -1.27
CTNND1-205ENST00000399050 DUX3Q96PT4 197 aa7.11□□□□□ -1.27
CTNND1-205ENST00000399050 TRBV6-6A0A0A6YYG2 114 aa7.11□□□□□ -1.27
CTNND1-205ENST00000399050 TCRAP04437 139 aa7.11□□□□□ -1.27
CTNND1-205ENST00000399050 CD7P09564 240 aa7.11□□□□□ -1.27
CTNND1-205ENST00000399050 MYOD1P15172 320 aa7.11□□□□□ -1.27
CTNND1-205ENST00000399050 Q6ZWC4 215 aa7.11□□□□□ -1.27
CTNND1-205ENST00000399050 GGNQ86UU5 652 aa7.11□□□□□ -1.27
CTNND1-205ENST00000399050 SLC25A39Q9BZJ4 359 aaPredicted RBP7.11□□□□□ -1.27
CTNND1-205ENST00000399050 YAE1D1Q9NRH1 226 aa7.11□□□□□ -1.27
CTNND1-205ENST00000399050 PMS2P5A8MQ11 134 aa7.11□□□□□ -1.27
CTNND1-205ENST00000399050 C17orf100A8MU93 164 aa7.11□□□□□ -1.27
CTNND1-205ENST00000399050 LINC01559Q495D7 138 aa7.11□□□□□ -1.27
CTNND1-205ENST00000399050 TMEM42Q69YG0 159 aa7.11□□□□□ -1.27
CTNND1-205ENST00000399050 Q6P435 159 aa7.11□□□□□ -1.27
CTNND1-205ENST00000399050 FOXG1P55316 489 aaPredicted RBP7.11□□□□□ -1.27
CTNND1-205ENST00000399050 LINC00205P59089 165 aa7.11□□□□□ -1.27
CTNND1-205ENST00000399050 TMEM133Q9H2Q1 129 aa7.11□□□□□ -1.27
CTNND1-205ENST00000399050 KNTC1P50748 2209 aa7.1□□□□□ -1.27
CTNND1-205ENST00000399050 IGHV1-18A0A0C4DH31 117 aa7.1□□□□□ -1.27
CTNND1-205ENST00000399050 RBMY1BA6NDE4 496 aaKnown RBP7.1□□□□□ -1.27
CTNND1-205ENST00000399050 RBMY1EA6NEQ0 496 aaKnown RBP7.1□□□□□ -1.27
CTNND1-205ENST00000399050 RBMY1DP0C7P1 496 aaKnown RBP7.1□□□□□ -1.27
CTNND1-205ENST00000399050 RBMY1A1P0DJD3 496 aaKnown RBP7.1□□□□□ -1.27
CTNND1-205ENST00000399050 RBMY1CP0DJD4 496 aa7.1□□□□□ -1.27
CTNND1-205ENST00000399050 KLF17Q5JT82 389 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-205ENST00000399050 C10orf55Q5SWW7 151 aa7.1□□□□□ -1.27
CTNND1-205ENST00000399050 Q6ZS49 121 aa7.1□□□□□ -1.27
CTNND1-205ENST00000399050 TRAV21A0A0B4J279 112 aa7.1□□□□□ -1.27
CTNND1-205ENST00000399050 FAM231BA6NCW3 169 aa7.1□□□□□ -1.27
CTNND1-205ENST00000399050 GAGE1Q13065 139 aa7.1□□□□□ -1.27
CTNND1-205ENST00000399050 PSG3Q16557 428 aa7.1□□□□□ -1.27
CTNND1-205ENST00000399050 DLX4Q92988 240 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-205ENST00000399050 TOMM7Q9P0U1 55 aa7.1□□□□□ -1.27
CTNND1-205ENST00000399050 WDR81Q562E7 1941 aa7.1□□□□□ -1.27
CTNND1-205ENST00000399050 E9PLN8 166 aa7.1□□□□□ -1.27
CTNND1-205ENST00000399050 SMAD7O15105 426 aaKnown RBP7.1□□□□□ -1.27
CTNND1-205ENST00000399050 SH2D1AO60880 128 aa7.1□□□□□ -1.27
CTNND1-205ENST00000399050 C20orf204Q6ZNR8 217 aa7.1□□□□□ -1.27
CTNND1-205ENST00000399050 TET1Q8NFU7 2136 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms