RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 RD3LP0DJH9 198 aa20.34■□□□□ 0.85
SHARPIN-202ENST00000398712 HNF1AP20823 631 aa20.34■□□□□ 0.85
SHARPIN-202ENST00000398712 CENPWQ5EE01 88 aa20.34■□□□□ 0.85
SHARPIN-202ENST00000398712 TRAV30A0A087WSZ9 112 aa20.33■□□□□ 0.84
SHARPIN-202ENST00000398712 FABP9Q0Z7S8 132 aa20.33■□□□□ 0.84
SHARPIN-202ENST00000398712 THYN1Q9P016 225 aa20.33■□□□□ 0.84
SHARPIN-202ENST00000398712 IGHV7-81A0A0B4J1V7 117 aa20.32■□□□□ 0.84
SHARPIN-202ENST00000398712 K7EN84 100 aa20.32■□□□□ 0.84
SHARPIN-202ENST00000398712 ZNF329Q86UD4 541 aa20.32■□□□□ 0.84
SHARPIN-202ENST00000398712 PIP4P2Q8N4L2 257 aa20.32■□□□□ 0.84
SHARPIN-202ENST00000398712 ZNF48Q96MX3 618 aaPredicted RBP20.32■□□□□ 0.84
SHARPIN-202ENST00000398712 FANCD2OSQ96PS1 177 aa20.32■□□□□ 0.84
SHARPIN-202ENST00000398712 FOXL1Q12952 345 aa20.31■□□□□ 0.84
SHARPIN-202ENST00000398712 KLF17Q5JT82 389 aaPredicted RBP20.31■□□□□ 0.84
SHARPIN-202ENST00000398712 TOMM40O96008 361 aa20.31■□□□□ 0.84
SHARPIN-202ENST00000398712 MFAP4P55083 255 aa20.31■□□□□ 0.84
SHARPIN-202ENST00000398712 HIST1H2BKO60814 126 aa20.3■□□□□ 0.84
SHARPIN-202ENST00000398712 HIST1H2BJP06899 126 aa20.3■□□□□ 0.84
SHARPIN-202ENST00000398712 GP9P14770 177 aa20.3■□□□□ 0.84
SHARPIN-202ENST00000398712 HIST1H2BOP23527 126 aa20.3■□□□□ 0.84
SHARPIN-202ENST00000398712 HIST1H2BBP33778 126 aa20.3■□□□□ 0.84
SHARPIN-202ENST00000398712 FAM3BP58499 235 aaPredicted RBP20.3■□□□□ 0.84
SHARPIN-202ENST00000398712 HIST1H2BDP58876 126 aa20.3■□□□□ 0.84
SHARPIN-202ENST00000398712 TAS2R60P59551 318 aa20.3■□□□□ 0.84
SHARPIN-202ENST00000398712 HIST1H2BCP62807 126 aa20.3■□□□□ 0.84
SHARPIN-202ENST00000398712 HIST2H2BEQ16778 126 aa20.3■□□□□ 0.84
SHARPIN-202ENST00000398712 HIST2H2BFQ5QNW6 126 aaPredicted RBP20.3■□□□□ 0.84
SHARPIN-202ENST00000398712 HIST1H2BHQ93079 126 aa20.3■□□□□ 0.84
SHARPIN-202ENST00000398712 HIST1H2BNQ99877 126 aa20.3■□□□□ 0.84
SHARPIN-202ENST00000398712 HIST1H2BMQ99879 126 aa20.3■□□□□ 0.84
SHARPIN-202ENST00000398712 DOPEY1Q5JWR5 2465 aa20.3■□□□□ 0.84
SHARPIN-202ENST00000398712 GNG7O60262 68 aa20.29■□□□□ 0.84
SHARPIN-202ENST00000398712 TYMSP04818 313 aa20.29■□□□□ 0.84
SHARPIN-202ENST00000398712 NBEAP1P0C6P0 100 aa20.29■□□□□ 0.84
SHARPIN-202ENST00000398712 CNN1P51911 297 aaKnown RBP20.29■□□□□ 0.84
SHARPIN-202ENST00000398712 LINC00518Q8N0U6 118 aa20.29■□□□□ 0.84
SHARPIN-202ENST00000398712 SLC25A39Q9BZJ4 359 aaPredicted RBP20.29■□□□□ 0.84
SHARPIN-202ENST00000398712 MRPL27Q9P0M9 148 aaKnown RBP20.29■□□□□ 0.84
SHARPIN-202ENST00000398712 CDC42EP3Q9UKI2 254 aa20.29■□□□□ 0.84
SHARPIN-202ENST00000398712 EGR2P11161 476 aaPredicted RBP20.29■□□□□ 0.84
SHARPIN-202ENST00000398712 CLEC12BQ2HXU8 276 aa20.29■□□□□ 0.84
SHARPIN-202ENST00000398712 AKAP6Q13023 2319 aa20.28■□□□□ 0.84
SHARPIN-202ENST00000398712 IGHV4-30-2A0A087WSY4 118 aa20.28■□□□□ 0.84
SHARPIN-202ENST00000398712 IGHV1-69DA0A0B4J2H0 117 aa20.28■□□□□ 0.84
SHARPIN-202ENST00000398712 PEX7O00628 323 aa20.28■□□□□ 0.84
SHARPIN-202ENST00000398712 IGHV1-69P01742 117 aa20.28■□□□□ 0.84
SHARPIN-202ENST00000398712 MYCNOSP40205 109 aa20.28■□□□□ 0.84
SHARPIN-202ENST00000398712 DSCR9P59020 149 aa20.28■□□□□ 0.84
SHARPIN-202ENST00000398712 YPEL3P61236 119 aaPredicted RBP20.28■□□□□ 0.84
SHARPIN-202ENST00000398712 SGMS2Q8NHU3 365 aa20.28■□□□□ 0.84
SHARPIN-202ENST00000398712 BLNKQ8WV28 456 aa20.28■□□□□ 0.84
SHARPIN-202ENST00000398712 FRZBQ92765 325 aa20.28■□□□□ 0.84
SHARPIN-202ENST00000398712 IGF2BP2-AS1Q96M15 143 aa20.28■□□□□ 0.84
SHARPIN-202ENST00000398712 TMEM14CQ9P0S9 112 aa20.28■□□□□ 0.84
SHARPIN-202ENST00000398712 NDUFA6P56556 154 aa20.27■□□□□ 0.84
SHARPIN-202ENST00000398712 RANP62826 216 aaKnown RBP20.27■□□□□ 0.84
SHARPIN-202ENST00000398712 PHOX2AO14813 284 aa20.26■□□□□ 0.83
SHARPIN-202ENST00000398712 TRGC1P0CF51 173 aa20.26■□□□□ 0.83
SHARPIN-202ENST00000398712 HIST1H1BP16401 226 aaKnown RBP20.26■□□□□ 0.83
SHARPIN-202ENST00000398712 ERVFC1-1P60608 527 aa20.26■□□□□ 0.83
SHARPIN-202ENST00000398712 S100A7AQ86SG5 101 aa20.26■□□□□ 0.83
SHARPIN-202ENST00000398712 C21orf62Q9NYP8 219 aa20.26■□□□□ 0.83
SHARPIN-202ENST00000398712 SCGB2A1O75556 95 aa20.26■□□□□ 0.83
SHARPIN-202ENST00000398712 IL36BQ9NZH7 164 aa20.26■□□□□ 0.83
SHARPIN-202ENST00000398712 TRAV9-1A0A075B6T8 112 aa20.25■□□□□ 0.83
SHARPIN-202ENST00000398712 GCGP01275 180 aa20.25■□□□□ 0.83
SHARPIN-202ENST00000398712 S100A8P05109 93 aa20.25■□□□□ 0.83
SHARPIN-202ENST00000398712 Q56UQ5 140 aa20.25■□□□□ 0.83
SHARPIN-202ENST00000398712 LEMD1Q68G75 181 aa20.25■□□□□ 0.83
SHARPIN-202ENST00000398712 FAM110DQ8TAY7 271 aaPredicted RBP20.25■□□□□ 0.83
SHARPIN-202ENST00000398712 RNF125Q96EQ8 232 aa20.25■□□□□ 0.83
SHARPIN-202ENST00000398712 HSPB9Q9BQS6 159 aa20.25■□□□□ 0.83
SHARPIN-202ENST00000398712 SLC25A5P05141 298 aaKnown RBP20.24■□□□□ 0.83
SHARPIN-202ENST00000398712 COX6B1P14854 86 aa20.24■□□□□ 0.83
SHARPIN-202ENST00000398712 PAX1P15863 534 aa20.24■□□□□ 0.83
SHARPIN-202ENST00000398712 HOXA5P20719 270 aa20.24■□□□□ 0.83
SHARPIN-202ENST00000398712 ZNF600Q6ZNG1 722 aa20.24■□□□□ 0.83
SHARPIN-202ENST00000398712 ZNF491Q8N8L2 437 aa20.24■□□□□ 0.83
SHARPIN-202ENST00000398712 SHANK2-AS3Q9BTD1 123 aa20.24■□□□□ 0.83
SHARPIN-202ENST00000398712 MYO18BQ8IUG5 2567 aa20.24■□□□□ 0.83
SHARPIN-202ENST00000398712 MED13LQ71F56 2210 aa20.24■□□□□ 0.83
SHARPIN-202ENST00000398712 WI2-2373I1.2A0A1W2PRP0 233 aa20.23■□□□□ 0.83
SHARPIN-202ENST00000398712 PGPA6NDG6 321 aa20.23■□□□□ 0.83
SHARPIN-202ENST00000398712 OR5I1Q13606 314 aa20.23■□□□□ 0.83
SHARPIN-202ENST00000398712 TMEM68Q96MH6 324 aa20.23■□□□□ 0.83
SHARPIN-202ENST00000398712 OSTCQ9NRP0 149 aa20.23■□□□□ 0.83
SHARPIN-202ENST00000398712 EPDR1Q9UM22 224 aa20.23■□□□□ 0.83
SHARPIN-202ENST00000398712 S4R3C0 116 aa20.23■□□□□ 0.83
SHARPIN-202ENST00000398712 TRAV40A0A0B4J280 105 aa20.23■□□□□ 0.83
SHARPIN-202ENST00000398712 A0A0U1RQK1 487 aa20.23■□□□□ 0.83
SHARPIN-202ENST00000398712 ZNF320A2RRD8 509 aa20.23■□□□□ 0.83
SHARPIN-202ENST00000398712 H3BRN7 92 aa20.23■□□□□ 0.83
SHARPIN-202ENST00000398712 OR2J3O76001 311 aa20.23■□□□□ 0.83
SHARPIN-202ENST00000398712 NDUFB8O95169 186 aa20.23■□□□□ 0.83
SHARPIN-202ENST00000398712 IGLV2-8P01709 118 aa20.23■□□□□ 0.83
SHARPIN-202ENST00000398712 IL4P05112 153 aa20.23■□□□□ 0.83
SHARPIN-202ENST00000398712 UNQ5815/PRO19632Q6UWF5 114 aa20.23■□□□□ 0.83
SHARPIN-202ENST00000398712 TXN2Q99757 166 aa20.23■□□□□ 0.83
SHARPIN-202ENST00000398712 RNF24Q9Y225 148 aa20.23■□□□□ 0.83
SHARPIN-202ENST00000398712 MSMBP08118 114 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms