RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 NOTCH3Q9UM47 2321 aa9.1□□□□□ -0.95
HPS4-202ENST00000398145 C9orf172C9J069 976 aa9.09□□□□□ -0.95
HPS4-202ENST00000398145 FNDC10F2Z333 226 aa9.09□□□□□ -0.95
HPS4-202ENST00000398145 RIPPLY3P57055 190 aa9.09□□□□□ -0.95
HPS4-202ENST00000398145 ZNF114Q8NC26 417 aa9.09□□□□□ -0.95
HPS4-202ENST00000398145 OR9G4Q8NGQ1 327 aa9.09□□□□□ -0.95
HPS4-202ENST00000398145 SSC4DQ8WTU2 575 aa9.09□□□□□ -0.95
HPS4-202ENST00000398145 S4R3C0 116 aa9.09□□□□□ -0.95
HPS4-202ENST00000398145 ALPK3Q96L96 1907 aa9.09□□□□□ -0.95
HPS4-202ENST00000398145 A0A087X0K7 114 aa9.09□□□□□ -0.95
HPS4-202ENST00000398145 C18orf32Q8TCD1 76 aa9.09□□□□□ -0.95
HPS4-202ENST00000398145 CYYR1Q96J86 154 aa9.09□□□□□ -0.95
HPS4-202ENST00000398145 PRSS2P07478 247 aa9.09□□□□□ -0.95
HPS4-202ENST00000398145 ZNF883P0CG24 379 aa9.09□□□□□ -0.95
HPS4-202ENST00000398145 PPP1R27Q86WC6 154 aa9.09□□□□□ -0.95
HPS4-202ENST00000398145 C21orf62Q9NYP8 219 aa9.09□□□□□ -0.95
HPS4-202ENST00000398145 MED13LQ71F56 2210 aa9.09□□□□□ -0.95
HPS4-202ENST00000398145 PPBPP02775 128 aa9.09□□□□□ -0.95
HPS4-202ENST00000398145 C8orf46Q8TAG6 207 aa9.09□□□□□ -0.95
HPS4-202ENST00000398145 LINC00479Q96M42 142 aa9.09□□□□□ -0.95
HPS4-202ENST00000398145 SPRR3Q9UBC9 169 aa9.09□□□□□ -0.95
HPS4-202ENST00000398145 ABCA4P78363 2273 aa9.09□□□□□ -0.95
HPS4-202ENST00000398145 IGHV1-18A0A0C4DH31 117 aa9.08□□□□□ -0.96
HPS4-202ENST00000398145 C17orf100A8MU93 164 aa9.08□□□□□ -0.96
HPS4-202ENST00000398145 TCRAP04437 139 aa9.08□□□□□ -0.96
HPS4-202ENST00000398145 LOXL3P58215 753 aa9.08□□□□□ -0.96
HPS4-202ENST00000398145 PRR31Q5SQ13 230 aa9.08□□□□□ -0.96
HPS4-202ENST00000398145 DPF1Q92782 380 aa9.08□□□□□ -0.96
HPS4-202ENST00000398145 DPM3Q9P2X0 92 aa9.08□□□□□ -0.96
HPS4-202ENST00000398145 NCOA6Q14686 2063 aaPredicted RBP9.08□□□□□ -0.96
HPS4-202ENST00000398145 THADAQ6YHU6 1953 aa9.08□□□□□ -0.96
HPS4-202ENST00000398145 MYOD1P15172 320 aa9.08□□□□□ -0.96
HPS4-202ENST00000398145 DLX6P56179 175 aa9.08□□□□□ -0.96
HPS4-202ENST00000398145 Q0VFX4 171 aa9.08□□□□□ -0.96
HPS4-202ENST00000398145 RNF125Q96EQ8 232 aa9.08□□□□□ -0.96
HPS4-202ENST00000398145 GAGE12BA1L429 117 aa9.08□□□□□ -0.96
HPS4-202ENST00000398145 FABP5P3A8MUU1 101 aa9.08□□□□□ -0.96
HPS4-202ENST00000398145 NPPCP23582 126 aa9.08□□□□□ -0.96
HPS4-202ENST00000398145 LEPP41159 167 aa9.08□□□□□ -0.96
HPS4-202ENST00000398145 TEX43Q6ZNM6 134 aa9.08□□□□□ -0.96
HPS4-202ENST00000398145 NXT2Q9NPJ8 142 aaKnown RBP9.08□□□□□ -0.96
HPS4-202ENST00000398145 PLCE1Q9P212 2302 aa9.08□□□□□ -0.96
HPS4-202ENST00000398145 CD5LO43866 347 aa9.07□□□□□ -0.96
HPS4-202ENST00000398145 SNCGO76070 127 aa9.07□□□□□ -0.96
HPS4-202ENST00000398145 FTH1P19P0C7X4 201 aa9.07□□□□□ -0.96
HPS4-202ENST00000398145 HTN1P15515 57 aa9.07□□□□□ -0.96
HPS4-202ENST00000398145 IGHV3OR16-13A0A075B7E8 117 aa9.07□□□□□ -0.96
HPS4-202ENST00000398145 IGHV3-74A0A0B4J1X5 117 aa9.07□□□□□ -0.96
HPS4-202ENST00000398145 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.07□□□□□ -0.96
HPS4-202ENST00000398145 MLNRO43193 412 aa9.07□□□□□ -0.96
HPS4-202ENST00000398145 LGALS3P17931 250 aaKnown RBP9.07□□□□□ -0.96
HPS4-202ENST00000398145 GUSBP1Q15486 140 aa9.07□□□□□ -0.96
HPS4-202ENST00000398145 PVRIGQ6DKI7 326 aa9.07□□□□□ -0.96
HPS4-202ENST00000398145 KIR2DL4Q99706 377 aa9.07□□□□□ -0.96
HPS4-202ENST00000398145 SCRT1Q9BWW7 348 aa9.07□□□□□ -0.96
HPS4-202ENST00000398145 PSG1P11464 419 aa9.07□□□□□ -0.96
HPS4-202ENST00000398145 FOXC1Q12948 553 aa9.07□□□□□ -0.96
HPS4-202ENST00000398145 DMRTC2Q8IXT2 367 aaPredicted RBP9.07□□□□□ -0.96
HPS4-202ENST00000398145 Q8NFD4 153 aa9.07□□□□□ -0.96
HPS4-202ENST00000398145 SCGB3A1Q96QR1 104 aa9.07□□□□□ -0.96
HPS4-202ENST00000398145 NAA38Q9BRA0 125 aaKnown RBP9.07□□□□□ -0.96
HPS4-202ENST00000398145 ZNF256Q9Y2P7 627 aaPredicted RBP9.07□□□□□ -0.96
HPS4-202ENST00000398145 A0A0G2JLM5 398 aa9.07□□□□□ -0.96
HPS4-202ENST00000398145 LMO1P25800 156 aa9.07□□□□□ -0.96
HPS4-202ENST00000398145 ID1P41134 155 aa9.07□□□□□ -0.96
HPS4-202ENST00000398145 MLANAQ16655 118 aa9.07□□□□□ -0.96
HPS4-202ENST00000398145 TPTE2P1Q5T6R2 138 aa9.07□□□□□ -0.96
HPS4-202ENST00000398145 FAM53AQ6NSI3 398 aaPredicted RBP9.07□□□□□ -0.96
HPS4-202ENST00000398145 SELENOKQ9Y6D0 94 aa9.07□□□□□ -0.96
HPS4-202ENST00000398145 DPM2O94777 84 aa9.06□□□□□ -0.96
HPS4-202ENST00000398145 SAMD5Q5TGI4 173 aa9.06□□□□□ -0.96
HPS4-202ENST00000398145 CENPVQ7Z7K6 275 aaPredicted RBP9.06□□□□□ -0.96
HPS4-202ENST00000398145 V9GYV3 84 aa9.06□□□□□ -0.96
HPS4-202ENST00000398145 KIR2DL5BA0A0G2JN68 375 aa9.06□□□□□ -0.96
HPS4-202ENST00000398145 KIR2DL5BA0A0G2JPC4 375 aa9.06□□□□□ -0.96
HPS4-202ENST00000398145 ZNF138P52744 262 aa9.06□□□□□ -0.96
HPS4-202ENST00000398145 UNQ6494/PRO21346Q6UXR6 183 aa9.06□□□□□ -0.96
HPS4-202ENST00000398145 KIR2DL5AQ8N109 375 aa9.06□□□□□ -0.96
HPS4-202ENST00000398145 SIGMAR1Q99720 223 aa9.06□□□□□ -0.96
HPS4-202ENST00000398145 M0R381 172 aa9.06□□□□□ -0.96
HPS4-202ENST00000398145 MMP23AO75900 390 aa9.06□□□□□ -0.96
HPS4-202ENST00000398145 TTC32Q5I0X7 151 aa9.06□□□□□ -0.96
HPS4-202ENST00000398145 ZNF418Q8TF45 676 aaPredicted RBP9.06□□□□□ -0.96
HPS4-202ENST00000398145 RAXQ9Y2V3 346 aa9.06□□□□□ -0.96
HPS4-202ENST00000398145 B9A039 149 aa9.05□□□□□ -0.96
HPS4-202ENST00000398145 RNASE2P10153 161 aaKnown RBP9.05□□□□□ -0.96
HPS4-202ENST00000398145 TDGF1P13385 188 aa9.05□□□□□ -0.96
HPS4-202ENST00000398145 ERVK11-1P61568 191 aa9.05□□□□□ -0.96
HPS4-202ENST00000398145 EXOC3-AS1Q8N2X6 119 aa9.05□□□□□ -0.96
HPS4-202ENST00000398145 RPRMLQ8N4K4 120 aa9.05□□□□□ -0.96
HPS4-202ENST00000398145 TMEM167AQ8TBQ9 72 aa9.05□□□□□ -0.96
HPS4-202ENST00000398145 COL4A3Q01955 1670 aa9.05□□□□□ -0.96
HPS4-202ENST00000398145 IGKV1D-17A0A075B6S4 117 aa9.05□□□□□ -0.96
HPS4-202ENST00000398145 LHFPL4Q7Z7J7 247 aa9.05□□□□□ -0.96
HPS4-202ENST00000398145 TMEM133Q9H2Q1 129 aa9.05□□□□□ -0.96
HPS4-202ENST00000398145 PROK2Q9HC23 129 aa9.05□□□□□ -0.96
HPS4-202ENST00000398145 PMS2P5A8MQ11 134 aa9.05□□□□□ -0.96
HPS4-202ENST00000398145 VDAC2P45880 294 aaPredicted RBP9.05□□□□□ -0.96
HPS4-202ENST00000398145 RPL15P61313 204 aaKnown RBP9.05□□□□□ -0.96
HPS4-202ENST00000398145 TMEM170BQ5T4T1 132 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms