RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 GNB4Q9HAV0 340 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 CBLN4Q9NTU7 201 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 IGHV3OR16-13A0A075B7E8 117 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 IGHV3-74A0A0B4J1X5 117 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 IGHV1-3A0A0C4DH29 117 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 NBEAP1P0C6P0 100 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 GZMBP10144 247 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 BTF3P20290 206 aaKnown RBP8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 TMEM177Q53S58 311 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 IGF2-ASQ6U949 168 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 COL25A1Q9BXS0 654 aaPredicted RBP8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 DOPEY2Q9Y3R5 2298 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 USP9YO00507 2555 aaPredicted RBP8.4□□□□□ -1.06
CPSF1P1-201ENST00000397477 TCRBV4S1A1TA0A5B7 111 aa8.4□□□□□ -1.06
CPSF1P1-201ENST00000397477 ITGB1BP1O14713 200 aa8.4□□□□□ -1.06
CPSF1P1-201ENST00000397477 CSN3P07498 182 aa8.4□□□□□ -1.06
CPSF1P1-201ENST00000397477 ZNF25P17030 456 aaPredicted RBP8.4□□□□□ -1.06
CPSF1P1-201ENST00000397477 HTR1DP28221 377 aa8.4□□□□□ -1.06
CPSF1P1-201ENST00000397477 NBL1P41271 181 aa8.4□□□□□ -1.06
CPSF1P1-201ENST00000397477 LGALS7P47929 136 aa8.4□□□□□ -1.06
CPSF1P1-201ENST00000397477 FOXA3P55318 350 aaPredicted RBP8.4□□□□□ -1.06
CPSF1P1-201ENST00000397477 ETFRF1Q6IPR1 90 aa8.4□□□□□ -1.06
CPSF1P1-201ENST00000397477 RNASEKQ6P5S7 137 aaKnown RBP8.4□□□□□ -1.06
CPSF1P1-201ENST00000397477 FAM168AQ92567 244 aa8.4□□□□□ -1.06
CPSF1P1-201ENST00000397477 WNT10AQ9GZT5 417 aa8.4□□□□□ -1.06
CPSF1P1-201ENST00000397477 MUC21A0A0G2JKD1 596 aa8.4□□□□□ -1.06
CPSF1P1-201ENST00000397477 MUC21A0A140T8X8 626 aa8.4□□□□□ -1.06
CPSF1P1-201ENST00000397477 PEX7O00628 323 aa8.4□□□□□ -1.06
CPSF1P1-201ENST00000397477 MUC21Q5SSG8 566 aa8.4□□□□□ -1.06
CPSF1P1-201ENST00000397477 TCF24Q7RTU0 167 aa8.4□□□□□ -1.06
CPSF1P1-201ENST00000397477 CACNG8Q8WXS5 425 aa8.4□□□□□ -1.06
CPSF1P1-201ENST00000397477 EPG5Q9HCE0 2579 aa8.4□□□□□ -1.06
CPSF1P1-201ENST00000397477 RUSC1-AS1Q66K80 236 aa8.4□□□□□ -1.07
CPSF1P1-201ENST00000397477 GOLT1AQ6ZVE7 132 aa8.4□□□□□ -1.07
CPSF1P1-201ENST00000397477 EXOC3-AS1Q8N2X6 119 aa8.4□□□□□ -1.07
CPSF1P1-201ENST00000397477 CORTO00230 105 aa8.39□□□□□ -1.07
CPSF1P1-201ENST00000397477 GNG7O60262 68 aa8.39□□□□□ -1.07
CPSF1P1-201ENST00000397477 FCGR2BP31994 310 aaPredicted RBP8.39□□□□□ -1.07
CPSF1P1-201ENST00000397477 CDSNQ15517 529 aa8.39□□□□□ -1.07
CPSF1P1-201ENST00000397477 ZNF596Q8TC21 504 aa8.39□□□□□ -1.07
CPSF1P1-201ENST00000397477 ZNF503Q96F45 646 aa8.39□□□□□ -1.07
CPSF1P1-201ENST00000397477 PGLYRP4Q96LB8 373 aa8.39□□□□□ -1.07
CPSF1P1-201ENST00000397477 HIGD1AQ9Y241 93 aa8.39□□□□□ -1.07
CPSF1P1-201ENST00000397477 SH2D7A6NKC9 451 aaPredicted RBP8.39□□□□□ -1.07
CPSF1P1-201ENST00000397477 LIPFP07098 398 aa8.39□□□□□ -1.07
CPSF1P1-201ENST00000397477 SPOCK3Q9BQ16 436 aa8.39□□□□□ -1.07
CPSF1P1-201ENST00000397477 SLC25A2Q9BXI2 301 aa8.39□□□□□ -1.07
CPSF1P1-201ENST00000397477 PRDM13Q9H4Q3 707 aa8.39□□□□□ -1.07
CPSF1P1-201ENST00000397477 SIGLEC9Q9Y336 463 aa8.39□□□□□ -1.07
CPSF1P1-201ENST00000397477 CENPEQ02224 2701 aa8.39□□□□□ -1.07
CPSF1P1-201ENST00000397477 BUB1B-PAK6H3BSN5 160 aa8.39□□□□□ -1.07
CPSF1P1-201ENST00000397477 HSBP1O75506 76 aa8.39□□□□□ -1.07
CPSF1P1-201ENST00000397477 APCSP02743 223 aa8.39□□□□□ -1.07
CPSF1P1-201ENST00000397477 SELENOTP62341 195 aa8.39□□□□□ -1.07
CPSF1P1-201ENST00000397477 FOXL1Q12952 345 aa8.39□□□□□ -1.07
CPSF1P1-201ENST00000397477 JOSD1Q15040 202 aaPredicted RBP8.39□□□□□ -1.07
CPSF1P1-201ENST00000397477 ECSCRQ19T08 205 aa8.39□□□□□ -1.07
CPSF1P1-201ENST00000397477 REC114Q7Z4M0 266 aa8.39□□□□□ -1.07
CPSF1P1-201ENST00000397477 ZNF664Q8N3J9 261 aa8.39□□□□□ -1.07
CPSF1P1-201ENST00000397477 TMUB1Q9BVT8 246 aa8.39□□□□□ -1.07
CPSF1P1-201ENST00000397477 NAGKQ9UJ70 344 aa8.39□□□□□ -1.07
CPSF1P1-201ENST00000397477 LOC105371242A0A075B767 164 aa8.38□□□□□ -1.07
CPSF1P1-201ENST00000397477 IL4P05112 153 aa8.38□□□□□ -1.07
CPSF1P1-201ENST00000397477 PSG1P11464 419 aa8.38□□□□□ -1.07
CPSF1P1-201ENST00000397477 SFTPCP11686 197 aa8.38□□□□□ -1.07
CPSF1P1-201ENST00000397477 BORCS7Q96B45 105 aa8.38□□□□□ -1.07
CPSF1P1-201ENST00000397477 POLQO75417 2590 aa8.38□□□□□ -1.07
CPSF1P1-201ENST00000397477 COL8A1P27658 744 aa8.38□□□□□ -1.07
CPSF1P1-201ENST00000397477 POU2AF1Q16633 256 aa8.38□□□□□ -1.07
CPSF1P1-201ENST00000397477 C3orf36Q3SXR2 165 aa8.38□□□□□ -1.07
CPSF1P1-201ENST00000397477 PATE2Q6UY27 113 aa8.38□□□□□ -1.07
CPSF1P1-201ENST00000397477 RNASEH2CQ8TDP1 164 aaKnown RBP8.38□□□□□ -1.07
CPSF1P1-201ENST00000397477 ZNF586Q9NXT0 402 aa8.38□□□□□ -1.07
CPSF1P1-201ENST00000397477 IGHV3-49A0A0A0MS15 119 aa8.38□□□□□ -1.07
CPSF1P1-201ENST00000397477 C22orf46C9J442 243 aa8.38□□□□□ -1.07
CPSF1P1-201ENST00000397477 TMEM30BQ3MIR4 351 aa8.38□□□□□ -1.07
CPSF1P1-201ENST00000397477 GBGT1Q8N5D6 347 aa8.38□□□□□ -1.07
CPSF1P1-201ENST00000397477 PYGO2Q9BRQ0 406 aa8.38□□□□□ -1.07
CPSF1P1-201ENST00000397477 A0A1B0GWJ7 208 aa8.37□□□□□ -1.07
CPSF1P1-201ENST00000397477 P01737 135 aa8.37□□□□□ -1.07
CPSF1P1-201ENST00000397477 CD99P14209 185 aa8.37□□□□□ -1.07
CPSF1P1-201ENST00000397477 MRPL32Q9BYC8 188 aaKnown RBP8.37□□□□□ -1.07
CPSF1P1-201ENST00000397477 IGHV3-66A0A0C4DH42 116 aa8.37□□□□□ -1.07
CPSF1P1-201ENST00000397477 SERTM2A0A1B0GWG4 89 aa8.37□□□□□ -1.07
CPSF1P1-201ENST00000397477 A0A1W2PRE2 83 aa8.37□□□□□ -1.07
CPSF1P1-201ENST00000397477 RNF2Q99496 336 aa8.37□□□□□ -1.07
CPSF1P1-201ENST00000397477 HIGD1CA8MV81 97 aa8.37□□□□□ -1.07
CPSF1P1-201ENST00000397477 CHEK1O14757 476 aa8.37□□□□□ -1.07
CPSF1P1-201ENST00000397477 OR2J3O76001 311 aa8.37□□□□□ -1.07
CPSF1P1-201ENST00000397477 NUDT10Q8NFP7 164 aa8.37□□□□□ -1.07
CPSF1P1-201ENST00000397477 NUDT11Q96G61 164 aa8.37□□□□□ -1.07
CPSF1P1-201ENST00000397477 VAMP8Q9BV40 100 aa8.37□□□□□ -1.07
CPSF1P1-201ENST00000397477 Q9H3A6 140 aa8.37□□□□□ -1.07
CPSF1P1-201ENST00000397477 NCOR1P1Q9H4R4 102 aa8.37□□□□□ -1.07
CPSF1P1-201ENST00000397477 DPM3Q9P2X0 92 aa8.37□□□□□ -1.07
CPSF1P1-201ENST00000397477 V9GYV3 84 aa8.37□□□□□ -1.07
CPSF1P1-201ENST00000397477 M0QZ24 198 aa8.36□□□□□ -1.07
CPSF1P1-201ENST00000397477 KLRB1Q12918 225 aa8.36□□□□□ -1.07
CPSF1P1-201ENST00000397477 SELENOKQ9Y6D0 94 aa8.36□□□□□ -1.07
CPSF1P1-201ENST00000397477 RAI1Q7Z5J4 1906 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms