RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 FAM25AB3EWG3 89 aa8.48□□□□□ -1.05
SYNE4-203ENST00000397428 FAM25CB3EWG5 89 aa8.48□□□□□ -1.05
SYNE4-203ENST00000397428 FAM25GB3EWG6 89 aa8.48□□□□□ -1.05
SYNE4-203ENST00000397428 GSTZ1O43708 216 aaPredicted RBP8.48□□□□□ -1.05
SYNE4-203ENST00000397428 RAB3DO95716 219 aa8.48□□□□□ -1.05
SYNE4-203ENST00000397428 TAS2R19P59542 299 aa8.48□□□□□ -1.05
SYNE4-203ENST00000397428 STEAP1BQ6NZ63 245 aa8.48□□□□□ -1.05
SYNE4-203ENST00000397428 OR51G1Q8NGK1 321 aa8.48□□□□□ -1.05
SYNE4-203ENST00000397428 C15orf40Q8WUR7 153 aa8.48□□□□□ -1.05
SYNE4-203ENST00000397428 NIPSNAP3BQ9BS92 247 aa8.48□□□□□ -1.05
SYNE4-203ENST00000397428 WDR12Q9GZL7 423 aaKnown RBP8.48□□□□□ -1.05
SYNE4-203ENST00000397428 CACNG5Q9UF02 275 aa8.48□□□□□ -1.05
SYNE4-203ENST00000397428 GPR132Q9UNW8 380 aa8.48□□□□□ -1.05
SYNE4-203ENST00000397428 RFNGQ9Y644 331 aa8.48□□□□□ -1.05
SYNE4-203ENST00000397428 TMEM56-RWDD3S4R434 201 aa8.48□□□□□ -1.05
SYNE4-203ENST00000397428 MUC4Q99102 2169 aa8.48□□□□□ -1.05
SYNE4-203ENST00000397428 IGLV2-18A0A075B6J9 118 aa8.47□□□□□ -1.05
SYNE4-203ENST00000397428 CEBPZOSA8MTT3 80 aa8.47□□□□□ -1.05
SYNE4-203ENST00000397428 ZNF182P17025 639 aaPredicted RBP8.47□□□□□ -1.05
SYNE4-203ENST00000397428 EMP1P54849 157 aa8.47□□□□□ -1.05
SYNE4-203ENST00000397428 DEFB1P60022 68 aa8.47□□□□□ -1.05
SYNE4-203ENST00000397428 KLF9Q13886 244 aaPredicted RBP8.47□□□□□ -1.05
SYNE4-203ENST00000397428 MEF2DQ14814 521 aa8.47□□□□□ -1.05
SYNE4-203ENST00000397428 SURF2Q15527 256 aaPredicted RBP8.47□□□□□ -1.05
SYNE4-203ENST00000397428 SCGB2B2Q4G0G5 96 aa8.47□□□□□ -1.05
SYNE4-203ENST00000397428 C1orf194Q5T5A4 169 aa8.47□□□□□ -1.05
SYNE4-203ENST00000397428 FAM222AQ5U5X8 452 aa8.47□□□□□ -1.05
SYNE4-203ENST00000397428 SPATA31B1PQ5VZV4 182 aa8.47□□□□□ -1.05
SYNE4-203ENST00000397428 ZNF709Q8N972 641 aa8.47□□□□□ -1.05
SYNE4-203ENST00000397428 ACY3Q96HD9 319 aa8.47□□□□□ -1.05
SYNE4-203ENST00000397428 NAA60Q9H7X0 242 aa8.47□□□□□ -1.05
SYNE4-203ENST00000397428 EXTL2Q9UBQ6 330 aa8.47□□□□□ -1.05
SYNE4-203ENST00000397428 U3KQ87 197 aa8.47□□□□□ -1.05
SYNE4-203ENST00000397428 TEX48A0A1B0GUV7 120 aa8.46□□□□□ -1.06
SYNE4-203ENST00000397428 CRYM-AS1A6NIL9 109 aa8.46□□□□□ -1.06
SYNE4-203ENST00000397428 GABARAPH6UMI1 98 aa8.46□□□□□ -1.06
SYNE4-203ENST00000397428 SOCS3O14543 225 aa8.46□□□□□ -1.06
SYNE4-203ENST00000397428 GABARAPO95166 117 aa8.46□□□□□ -1.06
SYNE4-203ENST00000397428 IGKV3-20P01619 116 aa8.46□□□□□ -1.06
SYNE4-203ENST00000397428 GPX4P36969 197 aaPredicted RBP8.46□□□□□ -1.06
SYNE4-203ENST00000397428 ID1P41134 155 aa8.46□□□□□ -1.06
SYNE4-203ENST00000397428 PSMB3P49720 205 aa8.46□□□□□ -1.06
SYNE4-203ENST00000397428 PAX9P55771 341 aa8.46□□□□□ -1.06
SYNE4-203ENST00000397428 ATP5IP56385 69 aaPredicted RBP8.46□□□□□ -1.06
SYNE4-203ENST00000397428 FXYD7P58549 80 aa8.46□□□□□ -1.06
SYNE4-203ENST00000397428 SSBP1Q04837 148 aaKnown RBP8.46□□□□□ -1.06
SYNE4-203ENST00000397428 ZNF79Q15937 498 aa8.46□□□□□ -1.06
SYNE4-203ENST00000397428 CTF1Q16619 201 aa8.46□□□□□ -1.06
SYNE4-203ENST00000397428 TMEM268Q5VZI3 342 aa8.46□□□□□ -1.06
SYNE4-203ENST00000397428 OR8G2PQ6IF36 304 aa8.46□□□□□ -1.06
SYNE4-203ENST00000397428 FOXI2Q6ZQN5 318 aa8.46□□□□□ -1.06
SYNE4-203ENST00000397428 C1orf158Q8N1D5 194 aa8.46□□□□□ -1.06
SYNE4-203ENST00000397428 RNF125Q96EQ8 232 aa8.46□□□□□ -1.06
SYNE4-203ENST00000397428 LINC00052Q96N35 136 aa8.46□□□□□ -1.06
SYNE4-203ENST00000397428 PFDN2Q9UHV9 154 aa8.46□□□□□ -1.06
SYNE4-203ENST00000397428 C14orf166Q9Y224 244 aaKnown RBP8.46□□□□□ -1.06
SYNE4-203ENST00000397428 IGKV1D-37A0A075B6S9 117 aa8.45□□□□□ -1.06
SYNE4-203ENST00000397428 IGHV3OR16-12A0A075B7B8 117 aa8.45□□□□□ -1.06
SYNE4-203ENST00000397428 TNFAIP8O95379 198 aa8.45□□□□□ -1.06
SYNE4-203ENST00000397428 SULT1A3P0DMM9 295 aa8.45□□□□□ -1.06
SYNE4-203ENST00000397428 SULT1A4P0DMN0 295 aa8.45□□□□□ -1.06
SYNE4-203ENST00000397428 NUP62P37198 522 aaPredicted RBP8.45□□□□□ -1.06
SYNE4-203ENST00000397428 PSG9Q00887 426 aa8.45□□□□□ -1.06
SYNE4-203ENST00000397428 GAMTQ14353 236 aa8.45□□□□□ -1.06
SYNE4-203ENST00000397428 SOHLH1Q5JUK2 328 aa8.45□□□□□ -1.06
SYNE4-203ENST00000397428 C1orf134Q5TEV5 83 aa8.45□□□□□ -1.06
SYNE4-203ENST00000397428 GPR107Q5VW38 600 aa8.45□□□□□ -1.06
SYNE4-203ENST00000397428 UBE2DNLQ8IWF7 75 aa8.45□□□□□ -1.06
SYNE4-203ENST00000397428 AP3S1Q92572 193 aa8.45□□□□□ -1.06
SYNE4-203ENST00000397428 IL22RA2Q969J5 263 aa8.45□□□□□ -1.06
SYNE4-203ENST00000397428 SLC35B3Q9H1N7 401 aa8.45□□□□□ -1.06
SYNE4-203ENST00000397428 HSPB7Q9UBY9 170 aa8.45□□□□□ -1.06
SYNE4-203ENST00000397428 DYNC1H1Q14204 4646 aaKnown RBP8.45□□□□□ -1.06
SYNE4-203ENST00000397428 A8MTW9 85 aa8.44□□□□□ -1.06
SYNE4-203ENST00000397428 FAM3BP58499 235 aaPredicted RBP8.44□□□□□ -1.06
SYNE4-203ENST00000397428 ZNF90Q03938 601 aa8.44□□□□□ -1.06
SYNE4-203ENST00000397428 ZNF575Q86XF7 245 aa8.44□□□□□ -1.06
SYNE4-203ENST00000397428 OR4B1Q8NGF8 309 aa8.44□□□□□ -1.06
SYNE4-203ENST00000397428 MIXL1Q9H2W2 232 aa8.44□□□□□ -1.06
SYNE4-203ENST00000397428 RBKSQ9H477 322 aa8.44□□□□□ -1.06
SYNE4-203ENST00000397428 GOLT1BQ9Y3E0 138 aa8.44□□□□□ -1.06
SYNE4-203ENST00000397428 A0A0J9YX75 114 aa8.43□□□□□ -1.06
SYNE4-203ENST00000397428 SNRPGP15A8MWD9 76 aa8.43□□□□□ -1.06
SYNE4-203ENST00000397428 DISC1C4P0D8 188 aa8.43□□□□□ -1.06
SYNE4-203ENST00000397428 ISLRO14498 428 aa8.43□□□□□ -1.06
SYNE4-203ENST00000397428 HBE1P02100 147 aa8.43□□□□□ -1.06
SYNE4-203ENST00000397428 CCR6P51684 374 aa8.43□□□□□ -1.06
SYNE4-203ENST00000397428 SUPT4H1P63272 117 aaKnown RBP8.43□□□□□ -1.06
SYNE4-203ENST00000397428 FAM78BQ5VT40 261 aa8.43□□□□□ -1.06
SYNE4-203ENST00000397428 FAAP20Q6NZ36 180 aa8.43□□□□□ -1.06
SYNE4-203ENST00000397428 LGI3Q8N145 548 aa8.43□□□□□ -1.06
SYNE4-203ENST00000397428 C17orf77Q96MU5 243 aa8.43□□□□□ -1.06
SYNE4-203ENST00000397428 NAA50Q9GZZ1 169 aaKnown RBP8.43□□□□□ -1.06
SYNE4-203ENST00000397428 KCNIP3Q9Y2W7 256 aa8.43□□□□□ -1.06
SYNE4-203ENST00000397428 YTHDF2Q9Y5A9 579 aaKnown RBP8.43□□□□□ -1.06
SYNE4-203ENST00000397428 LOC102723971A0A1B0GUV8 181 aa8.42□□□□□ -1.06
SYNE4-203ENST00000397428 ZFP92A6NM28 416 aa8.42□□□□□ -1.06
SYNE4-203ENST00000397428 F6UB75 175 aa8.42□□□□□ -1.06
SYNE4-203ENST00000397428 HTN3P15516 51 aa8.42□□□□□ -1.06
SYNE4-203ENST00000397428 MRPS10P82664 201 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms