RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 C16orf54Q6UWD8 224 aa10.31□□□□□ -0.76
SEC13-204ENST00000397099 RNF183Q96D59 192 aa10.31□□□□□ -0.76
SEC13-204ENST00000397099 SDHCQ99643 169 aaPredicted RBP10.31□□□□□ -0.76
SEC13-204ENST00000397099 DYNC2H1Q8NCM8 4307 aaKnown RBP10.31□□□□□ -0.76
SEC13-204ENST00000397099 STARD9Q9P2P6 4700 aa10.31□□□□□ -0.76
SEC13-204ENST00000397099 IGHV3-66A0A0C4DH42 116 aa10.3□□□□□ -0.76
SEC13-204ENST00000397099 SNRPGP15A8MWD9 76 aa10.3□□□□□ -0.76
SEC13-204ENST00000397099 K7EQG2 157 aa10.3□□□□□ -0.76
SEC13-204ENST00000397099 WRBO00258 174 aa10.3□□□□□ -0.76
SEC13-204ENST00000397099 NKX2-1P43699 371 aaPredicted RBP10.3□□□□□ -0.76
SEC13-204ENST00000397099 APRG1Q8IVJ8 170 aa10.3□□□□□ -0.76
SEC13-204ENST00000397099 STHQ8IWL8 128 aa10.3□□□□□ -0.76
SEC13-204ENST00000397099 LILRB2Q8N423 598 aa10.3□□□□□ -0.76
SEC13-204ENST00000397099 STXBP6Q8NFX7 210 aa10.3□□□□□ -0.76
SEC13-204ENST00000397099 S100ZQ8WXG8 99 aa10.3□□□□□ -0.76
SEC13-204ENST00000397099 RNF125Q96EQ8 232 aa10.3□□□□□ -0.76
SEC13-204ENST00000397099 TRGV9Q99603 122 aa10.3□□□□□ -0.76
SEC13-204ENST00000397099 FBXL17Q9UF56 701 aa10.3□□□□□ -0.76
SEC13-204ENST00000397099 STRAPQ9Y3F4 350 aaKnown RBP10.3□□□□□ -0.76
SEC13-204ENST00000397099 LYRM1O43325 122 aa10.29□□□□□ -0.76
SEC13-204ENST00000397099 BUB3O43684 328 aa10.29□□□□□ -0.76
SEC13-204ENST00000397099 IAPPP10997 89 aa10.29□□□□□ -0.76
SEC13-204ENST00000397099 RPL35AP18077 110 aaKnown RBP10.29□□□□□ -0.76
SEC13-204ENST00000397099 BTCP35070 178 aa10.29□□□□□ -0.76
SEC13-204ENST00000397099 DEFB131AP59861 70 aa10.29□□□□□ -0.76
SEC13-204ENST00000397099 SNRPD3P62318 126 aaKnown RBP10.29□□□□□ -0.76
SEC13-204ENST00000397099 ID3Q02535 119 aa10.29□□□□□ -0.76
SEC13-204ENST00000397099 DEFB135Q30KP9 77 aa10.29□□□□□ -0.76
SEC13-204ENST00000397099 C1orf194Q5T5A4 169 aa10.29□□□□□ -0.76
SEC13-204ENST00000397099 SAMD13Q5VXD3 122 aa10.29□□□□□ -0.76
SEC13-204ENST00000397099 THAP8Q8NA92 274 aa10.29□□□□□ -0.76
SEC13-204ENST00000397099 DCANP1Q8TF63 244 aa10.29□□□□□ -0.76
SEC13-204ENST00000397099 MITD1Q8WV92 249 aa10.29□□□□□ -0.76
SEC13-204ENST00000397099 GLMPQ8WWB7 406 aa10.29□□□□□ -0.76
SEC13-204ENST00000397099 PAIP2BQ9ULR5 123 aaKnown RBP10.29□□□□□ -0.76
SEC13-204ENST00000397099 SLC45A2Q9UMX9 530 aa10.29□□□□□ -0.76
SEC13-204ENST00000397099 LINC00854A0A1B0GVQ3 168 aa10.28□□□□□ -0.76
SEC13-204ENST00000397099 USF2Q15853 346 aaPredicted RBP10.28□□□□□ -0.76
SEC13-204ENST00000397099 MORN3Q6PF18 240 aaPredicted RBP10.28□□□□□ -0.76
SEC13-204ENST00000397099 SIGLEC15Q6ZMC9 328 aa10.28□□□□□ -0.76
SEC13-204ENST00000397099 S100A7AQ86SG5 101 aa10.28□□□□□ -0.76
SEC13-204ENST00000397099 C20orf85Q9H1P6 137 aa10.28□□□□□ -0.76
SEC13-204ENST00000397099 NRN1Q9NPD7 142 aa10.28□□□□□ -0.76
SEC13-204ENST00000397099 FLVCR2Q9UPI3 526 aa10.28□□□□□ -0.76
SEC13-204ENST00000397099 ADAP1O75689 374 aa10.27□□□□□ -0.77
SEC13-204ENST00000397099 SPP1P10451 314 aa10.27□□□□□ -0.77
SEC13-204ENST00000397099 TAS2R30P59541 319 aa10.27□□□□□ -0.77
SEC13-204ENST00000397099 SPANXN5Q5MJ07 72 aa10.27□□□□□ -0.77
SEC13-204ENST00000397099 SMIM8Q96KF7 97 aa10.27□□□□□ -0.77
SEC13-204ENST00000397099 RAB40CQ96S21 281 aa10.27□□□□□ -0.77
SEC13-204ENST00000397099 PBDC1Q9BVG4 233 aa10.27□□□□□ -0.77
SEC13-204ENST00000397099 MAGT1Q9H0U3 335 aa10.27□□□□□ -0.77
SEC13-204ENST00000397099 FNDC10F2Z333 226 aa10.26□□□□□ -0.77
SEC13-204ENST00000397099 PLA2G10O15496 165 aa10.26□□□□□ -0.77
SEC13-204ENST00000397099 JTBO76095 146 aa10.26□□□□□ -0.77
SEC13-204ENST00000397099 ANXA7P20073 488 aaKnown RBP10.26□□□□□ -0.77
SEC13-204ENST00000397099 MZT2BQ6NZ67 158 aa10.26□□□□□ -0.77
SEC13-204ENST00000397099 BPIFCQ8NFQ6 507 aa10.26□□□□□ -0.77
SEC13-204ENST00000397099 OR4D5Q8NGN0 318 aa10.26□□□□□ -0.77
SEC13-204ENST00000397099 RNF24Q9Y225 148 aa10.26□□□□□ -0.77
SEC13-204ENST00000397099 IGKV1D-37A0A075B6S9 117 aa10.25□□□□□ -0.77
SEC13-204ENST00000397099 PRSS46E5RG02 174 aa10.25□□□□□ -0.77
SEC13-204ENST00000397099 TSC22D2O75157 780 aa10.25□□□□□ -0.77
SEC13-204ENST00000397099 CA1P00915 261 aaPredicted RBP10.25□□□□□ -0.77
SEC13-204ENST00000397099 TCRBP04435 133 aa10.25□□□□□ -0.77
SEC13-204ENST00000397099 ZNF688P0C7X2 276 aa10.25□□□□□ -0.77
SEC13-204ENST00000397099 ID1P41134 155 aa10.25□□□□□ -0.77
SEC13-204ENST00000397099 NUTF2P61970 127 aaKnown RBP10.25□□□□□ -0.77
SEC13-204ENST00000397099 ZNF90Q03938 601 aa10.25□□□□□ -0.77
SEC13-204ENST00000397099 ZNF846Q147U1 533 aa10.25□□□□□ -0.77
SEC13-204ENST00000397099 IAH1Q2TAA2 248 aaPredicted RBP10.25□□□□□ -0.77
SEC13-204ENST00000397099 TMEM144Q7Z5S9 345 aa10.25□□□□□ -0.77
SEC13-204ENST00000397099 PSENENQ9NZ42 101 aa10.25□□□□□ -0.77
SEC13-204ENST00000397099 SSSCA1O60232 199 aa10.24□□□□□ -0.77
SEC13-204ENST00000397099 MEOX2P50222 304 aa10.24□□□□□ -0.77
SEC13-204ENST00000397099 LYZP61626 148 aa10.24□□□□□ -0.77
SEC13-204ENST00000397099 SELENOTP62341 195 aa10.24□□□□□ -0.77
SEC13-204ENST00000397099 POLR2GP62487 172 aaKnown RBP eCLIP10.24□□□□□ -0.77
SEC13-204ENST00000397099 AKR1C1Q04828 323 aa10.24□□□□□ -0.77
SEC13-204ENST00000397099 ZNF124Q15973 351 aa10.24□□□□□ -0.77
SEC13-204ENST00000397099 LEMD1Q68G75 181 aa10.24□□□□□ -0.77
SEC13-204ENST00000397099 TRPT1Q86TN4 253 aaKnown RBP10.24□□□□□ -0.77
SEC13-204ENST00000397099 ZBTB8BQ8NAP8 495 aaPredicted RBP10.24□□□□□ -0.77
SEC13-204ENST00000397099 PPP1R14BQ96C90 147 aa10.24□□□□□ -0.77
SEC13-204ENST00000397099 GPR82Q96P67 336 aa10.24□□□□□ -0.77
SEC13-204ENST00000397099 RARRES2Q99969 163 aa10.24□□□□□ -0.77
SEC13-204ENST00000397099 C1QTNF4Q9BXJ3 329 aa10.24□□□□□ -0.77
SEC13-204ENST00000397099 WDR12Q9GZL7 423 aaKnown RBP10.24□□□□□ -0.77
SEC13-204ENST00000397099 C11orf68Q9H3H3 251 aaKnown RBP10.24□□□□□ -0.77
SEC13-204ENST00000397099 SACSQ9NZJ4 4579 aa10.24□□□□□ -0.77
SEC13-204ENST00000397099 IGKV1OR2-108A0A075B7D4 117 aa10.23□□□□□ -0.77
SEC13-204ENST00000397099 A0A0J9YWU9 116 aa10.23□□□□□ -0.77
SEC13-204ENST00000397099 FAM240BA0A1B0GVZ2 78 aa10.23□□□□□ -0.77
SEC13-204ENST00000397099 NUPR2A6NF83 97 aa10.23□□□□□ -0.77
SEC13-204ENST00000397099 SPATA31B1PQ5VZV4 182 aa10.23□□□□□ -0.77
SEC13-204ENST00000397099 OR8I2Q8N0Y5 310 aa10.23□□□□□ -0.77
SEC13-204ENST00000397099 FAM24BQ8N5W8 94 aa10.23□□□□□ -0.77
SEC13-204ENST00000397099 OR10P1Q8NGE3 313 aa10.23□□□□□ -0.77
SEC13-204ENST00000397099 ZNF431Q8TF32 576 aaPredicted RBP10.23□□□□□ -0.77
SEC13-204ENST00000397099 GGACTQ9BVM4 153 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms