RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 ZNF492Q9P255 531 aa12.81□□□□□ -0.36
GNE-202ENST00000396594 KAAG1Q9UBP8 84 aa12.81□□□□□ -0.36
GNE-202ENST00000396594 KNL1Q8NG31 2342 aa12.81□□□□□ -0.36
GNE-202ENST00000396594 NUP210Q8TEM1 1887 aaPredicted RBP12.81□□□□□ -0.36
GNE-202ENST00000396594 TRGV4A0A0C4DH28 118 aa12.8□□□□□ -0.36
GNE-202ENST00000396594 LINC00518Q8N0U6 118 aa12.8□□□□□ -0.36
GNE-202ENST00000396594 RPL36AP83881 106 aaKnown RBP12.8□□□□□ -0.36
GNE-202ENST00000396594 TMEM86BQ8N661 226 aa12.8□□□□□ -0.36
GNE-202ENST00000396594 RPL36ALQ969Q0 106 aaKnown RBP12.8□□□□□ -0.36
GNE-202ENST00000396594 TMEM160Q9NX00 188 aa12.8□□□□□ -0.36
GNE-202ENST00000396594 CKAP5Q14008 2032 aa12.8□□□□□ -0.36
GNE-202ENST00000396594 PLNP26678 52 aa12.8□□□□□ -0.36
GNE-202ENST00000396594 OR9G4Q8NGQ1 327 aa12.8□□□□□ -0.36
GNE-202ENST00000396594 IGKV1D-17A0A075B6S4 117 aa12.79□□□□□ -0.36
GNE-202ENST00000396594 PSPNO60542 156 aa12.79□□□□□ -0.36
GNE-202ENST00000396594 IGHV3-23P01764 117 aa12.79□□□□□ -0.36
GNE-202ENST00000396594 TCRAP04437 139 aa12.79□□□□□ -0.36
GNE-202ENST00000396594 LINC00614P0C842 121 aa12.79□□□□□ -0.36
GNE-202ENST00000396594 SCGB1A1P11684 91 aa12.79□□□□□ -0.36
GNE-202ENST00000396594 TDGF1P13385 188 aa12.79□□□□□ -0.36
GNE-202ENST00000396594 LY6DQ14210 128 aa12.79□□□□□ -0.36
GNE-202ENST00000396594 DPH3P1Q9H4G8 78 aa12.79□□□□□ -0.36
GNE-202ENST00000396594 RNF224P0DH78 156 aa12.79□□□□□ -0.36
GNE-202ENST00000396594 MALP21145 153 aa12.79□□□□□ -0.36
GNE-202ENST00000396594 COQ2Q96H96 371 aa12.79□□□□□ -0.36
GNE-202ENST00000396594 DAZ1Q9NQZ3 744 aaKnown RBP12.79□□□□□ -0.36
GNE-202ENST00000396594 OR10W1Q8NGF6 305 aa12.79□□□□□ -0.36
GNE-202ENST00000396594 MRPL27Q9P0M9 148 aaKnown RBP12.79□□□□□ -0.36
GNE-202ENST00000396594 H3BTX0 84 aa12.79□□□□□ -0.36
GNE-202ENST00000396594 ZNHIT1O43257 154 aa12.79□□□□□ -0.36
GNE-202ENST00000396594 ZNF833PQ6ZTB9 187 aa12.79□□□□□ -0.36
GNE-202ENST00000396594 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.78□□□□□ -0.36
GNE-202ENST00000396594 H0YIZ8 118 aa12.78□□□□□ -0.36
GNE-202ENST00000396594 C5orf30Q96GV9 206 aa12.78□□□□□ -0.36
GNE-202ENST00000396594 DMRTA2Q96SC8 542 aa12.78□□□□□ -0.36
GNE-202ENST00000396594 LY6G6EA0A0G2JKS1 128 aa12.78□□□□□ -0.36
GNE-202ENST00000396594 U3KQA8 63 aa12.78□□□□□ -0.36
GNE-202ENST00000396594 IGHV3-11P01762 117 aa12.78□□□□□ -0.36
GNE-202ENST00000396594 PSG3Q16557 428 aa12.78□□□□□ -0.36
GNE-202ENST00000396594 NPIPB5A8MRT5 1133 aa12.78□□□□□ -0.36
GNE-202ENST00000396594 PSG1P11464 419 aa12.78□□□□□ -0.36
GNE-202ENST00000396594 IGLV3-9A0A075B6K5 115 aa12.77□□□□□ -0.36
GNE-202ENST00000396594 VCYO14598 125 aa12.77□□□□□ -0.36
GNE-202ENST00000396594 ZNF585BQ52M93 769 aa12.77□□□□□ -0.36
GNE-202ENST00000396594 IL17RELQ6ZVW7 336 aa12.77□□□□□ -0.36
GNE-202ENST00000396594 SHANK2-AS3Q9BTD1 123 aa12.77□□□□□ -0.36
GNE-202ENST00000396594 PKIGQ9Y2B9 76 aa12.77□□□□□ -0.36
GNE-202ENST00000396594 PTPRZ1P23471 2315 aaPredicted RBP12.77□□□□□ -0.36
GNE-202ENST00000396594 IGHV2-70DA0A0C4DH43 119 aa12.77□□□□□ -0.36
GNE-202ENST00000396594 LAGE3Q14657 143 aa12.77□□□□□ -0.36
GNE-202ENST00000396594 FAM90A2PQ658T7 463 aa12.77□□□□□ -0.36
GNE-202ENST00000396594 LCN12Q6JVE5 192 aa12.77□□□□□ -0.36
GNE-202ENST00000396594 IGKV1-5P01602 117 aa12.77□□□□□ -0.37
GNE-202ENST00000396594 PLXNA2O75051 1894 aa12.77□□□□□ -0.37
GNE-202ENST00000396594 E7EQL1 145 aa12.77□□□□□ -0.37
GNE-202ENST00000396594 MLNRO43193 412 aa12.77□□□□□ -0.37
GNE-202ENST00000396594 VGLL1Q99990 258 aa12.77□□□□□ -0.37
GNE-202ENST00000396594 TRAV9-2A0A087WT02 112 aa12.76□□□□□ -0.37
GNE-202ENST00000396594 IGFL2Q6UWQ7 119 aa12.76□□□□□ -0.37
GNE-202ENST00000396594 TMEM75Q8N9X5 138 aa12.76□□□□□ -0.37
GNE-202ENST00000396594 RNASE2P10153 161 aaKnown RBP12.76□□□□□ -0.37
GNE-202ENST00000396594 IGHV1-69DA0A0B4J2H0 117 aa12.76□□□□□ -0.37
GNE-202ENST00000396594 TMEM238C9JI98 176 aa12.76□□□□□ -0.37
GNE-202ENST00000396594 H3BUX3 64 aa12.76□□□□□ -0.37
GNE-202ENST00000396594 IGHV1-69P01742 117 aa12.76□□□□□ -0.37
GNE-202ENST00000396594 EGR1P18146 543 aa12.76□□□□□ -0.37
GNE-202ENST00000396594 SRD5A1P18405 259 aa12.76□□□□□ -0.37
GNE-202ENST00000396594 KIAA1644Q3SXP7 199 aa12.76□□□□□ -0.37
GNE-202ENST00000396594 RASL10AQ92737 203 aa12.76□□□□□ -0.37
GNE-202ENST00000396594 SLC17A3O00476 420 aa12.76□□□□□ -0.37
GNE-202ENST00000396594 HAPLN4Q86UW8 402 aa12.76□□□□□ -0.37
GNE-202ENST00000396594 OR13C6PQ8NH95 151 aa12.76□□□□□ -0.37
GNE-202ENST00000396594 MGST2Q99735 147 aa12.76□□□□□ -0.37
GNE-202ENST00000396594 ZCCHC24Q8N2G6 241 aaKnown RBP12.75□□□□□ -0.37
GNE-202ENST00000396594 OR5A1Q8NGJ0 315 aa12.75□□□□□ -0.37
GNE-202ENST00000396594 MRPL16Q9NX20 251 aaKnown RBP12.75□□□□□ -0.37
GNE-202ENST00000396594 IGKV3-20P01619 116 aa12.75□□□□□ -0.37
GNE-202ENST00000396594 IGKV1D-8A0A087WSZ0 117 aa12.75□□□□□ -0.37
GNE-202ENST00000396594 ADARB2-AS1A8MUL3 147 aa12.75□□□□□ -0.37
GNE-202ENST00000396594 IGHV3-48P01763 117 aa12.75□□□□□ -0.37
GNE-202ENST00000396594 MDKP21741 143 aaPredicted RBP12.75□□□□□ -0.37
GNE-202ENST00000396594 HGFACQ04756 655 aa12.75□□□□□ -0.37
GNE-202ENST00000396594 TMEM14CQ9P0S9 112 aa12.75□□□□□ -0.37
GNE-202ENST00000396594 CHTOPQ9Y3Y2 248 aaKnown RBP12.75□□□□□ -0.37
GNE-202ENST00000396594 GRIFINA4D1Z8 144 aa12.75□□□□□ -0.37
GNE-202ENST00000396594 KLK15Q9H2R5 256 aa12.75□□□□□ -0.37
GNE-202ENST00000396594 SEPSECSQ9HD40 501 aaKnown RBP12.75□□□□□ -0.37
GNE-202ENST00000396594 CYTL1Q9NRR1 136 aa12.75□□□□□ -0.37
GNE-202ENST00000396594 CNTRLQ7Z7A1 2325 aa12.74□□□□□ -0.37
GNE-202ENST00000396594 SEC16AO15027 2179 aa12.74□□□□□ -0.37
GNE-202ENST00000396594 RCHY1Q96PM5 261 aa12.74□□□□□ -0.37
GNE-202ENST00000396594 CRIM1Q9NZV1 1036 aa12.74□□□□□ -0.37
GNE-202ENST00000396594 IGKCP01834 107 aa12.74□□□□□ -0.37
GNE-202ENST00000396594 KLF2Q9Y5W3 355 aaPredicted RBP12.74□□□□□ -0.37
GNE-202ENST00000396594 CABIN1Q9Y6J0 2220 aa12.74□□□□□ -0.37
GNE-202ENST00000396594 APOMO95445 188 aa12.74□□□□□ -0.37
GNE-202ENST00000396594 POU2AF1Q16633 256 aa12.74□□□□□ -0.37
GNE-202ENST00000396594 OCC1Q8TAD7 63 aa12.74□□□□□ -0.37
GNE-202ENST00000396594 IGHV3-35A0A0C4DH35 117 aa12.74□□□□□ -0.37
GNE-202ENST00000396594 TCF21O43680 179 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms