RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 PAIP2BQ9ULR5 123 aaKnown RBP11.91□□□□□ -0.5
DDR1-229ENST00000396342 A0A0B4J2A0 478 aa11.9□□□□□ -0.5
DDR1-229ENST00000396342 TEX48A0A1B0GUV7 120 aa11.9□□□□□ -0.5
DDR1-229ENST00000396342 RNF125Q96EQ8 232 aa11.9□□□□□ -0.5
DDR1-229ENST00000396342 LINC00052Q96N35 136 aa11.9□□□□□ -0.5
DDR1-229ENST00000396342 RNF126Q9BV68 326 aa11.9□□□□□ -0.5
DDR1-229ENST00000396342 XCL2Q9UBD3 114 aa11.9□□□□□ -0.5
DDR1-229ENST00000396342 SHPKQ9UHJ6 478 aa11.9□□□□□ -0.5
DDR1-229ENST00000396342 U3KQE9 123 aa11.9□□□□□ -0.5
DDR1-229ENST00000396342 EPPK1P58107 5090 aaKnown RBP11.9□□□□□ -0.5
DDR1-229ENST00000396342 SNRPGP15A8MWD9 76 aa11.89□□□□□ -0.51
DDR1-229ENST00000396342 MED6O75586 246 aa11.89□□□□□ -0.51
DDR1-229ENST00000396342 PSG1P11464 419 aa11.89□□□□□ -0.51
DDR1-229ENST00000396342 GPX4P36969 197 aaPredicted RBP11.89□□□□□ -0.51
DDR1-229ENST00000396342 NKX2-1P43699 371 aaPredicted RBP11.89□□□□□ -0.51
DDR1-229ENST00000396342 NMSQ5H8A3 153 aa11.89□□□□□ -0.51
DDR1-229ENST00000396342 SPATA31B1PQ5VZV4 182 aa11.89□□□□□ -0.51
DDR1-229ENST00000396342 EBLN2Q6P2I7 272 aa11.89□□□□□ -0.51
DDR1-229ENST00000396342 LHFPL5Q8TAF8 219 aa11.89□□□□□ -0.51
DDR1-229ENST00000396342 BCL7BQ9BQE9 202 aa11.89□□□□□ -0.51
DDR1-229ENST00000396342 NDUFAF3Q9BU61 184 aa11.89□□□□□ -0.51
DDR1-229ENST00000396342 MIXL1Q9H2W2 232 aa11.89□□□□□ -0.51
DDR1-229ENST00000396342 CCDC59Q9P031 241 aaKnown RBP11.89□□□□□ -0.51
DDR1-229ENST00000396342 IGHV4-4A0A075B6R2 117 aa11.88□□□□□ -0.51
DDR1-229ENST00000396342 DEFB131BA0A096LNP1 70 aa11.88□□□□□ -0.51
DDR1-229ENST00000396342 FABP12A6NFH5 140 aa11.88□□□□□ -0.51
DDR1-229ENST00000396342 BUB3O43684 328 aa11.88□□□□□ -0.51
DDR1-229ENST00000396342 CFDP00746 253 aaPredicted RBP11.88□□□□□ -0.51
DDR1-229ENST00000396342 SPART-AS1P0CW21 52 aa11.88□□□□□ -0.51
DDR1-229ENST00000396342 RBMY1A1P0DJD3 496 aaKnown RBP11.88□□□□□ -0.51
DDR1-229ENST00000396342 RBMY1CP0DJD4 496 aa11.88□□□□□ -0.51
DDR1-229ENST00000396342 P0DMU3 169 aa11.88□□□□□ -0.51
DDR1-229ENST00000396342 FAM231AP0DMU4 169 aa11.88□□□□□ -0.51
DDR1-229ENST00000396342 FAM231CP0DMU5 169 aa11.88□□□□□ -0.51
DDR1-229ENST00000396342 C4BPBP20851 252 aa11.88□□□□□ -0.51
DDR1-229ENST00000396342 RBMY1FQ15415 496 aaKnown RBP11.88□□□□□ -0.51
DDR1-229ENST00000396342 USF2Q15853 346 aaPredicted RBP11.88□□□□□ -0.51
DDR1-229ENST00000396342 C1orf194Q5T5A4 169 aa11.88□□□□□ -0.51
DDR1-229ENST00000396342 Q6ZTC4 211 aa11.88□□□□□ -0.51
DDR1-229ENST00000396342 CIB3Q96Q77 187 aaPredicted RBP11.88□□□□□ -0.51
DDR1-229ENST00000396342 RBKSQ9H477 322 aa11.88□□□□□ -0.51
DDR1-229ENST00000396342 HSPB7Q9UBY9 170 aa11.88□□□□□ -0.51
DDR1-229ENST00000396342 ALMS1Q8TCU4 4167 aa11.88□□□□□ -0.51
DDR1-229ENST00000396342 ANKRD20A5PA0PJZ0 165 aa11.87□□□□□ -0.51
DDR1-229ENST00000396342 SMIM9A6NGZ8 99 aa11.87□□□□□ -0.51
DDR1-229ENST00000396342 TMBIM6P55061 237 aa11.87□□□□□ -0.51
DDR1-229ENST00000396342 LYZP61626 148 aa11.87□□□□□ -0.51
DDR1-229ENST00000396342 SPCS2Q15005 226 aa11.87□□□□□ -0.51
DDR1-229ENST00000396342 GGNBP1Q5YKI7 109 aa11.87□□□□□ -0.51
DDR1-229ENST00000396342 OR8I2Q8N0Y5 310 aa11.87□□□□□ -0.51
DDR1-229ENST00000396342 C7orf50Q9BRJ6 194 aaKnown RBP11.87□□□□□ -0.51
DDR1-229ENST00000396342 APLNQ9ULZ1 77 aa11.87□□□□□ -0.51
DDR1-229ENST00000396342 GOLT1BQ9Y3E0 138 aa11.87□□□□□ -0.51
DDR1-229ENST00000396342 IGHV3OR16-12A0A075B7B8 117 aa11.86□□□□□ -0.51
DDR1-229ENST00000396342 DUXBA0A1W2PPF3 345 aa11.86□□□□□ -0.51
DDR1-229ENST00000396342 H3BMM0 161 aa11.86□□□□□ -0.51
DDR1-229ENST00000396342 IFNA21P01568 189 aa11.86□□□□□ -0.51
DDR1-229ENST00000396342 SMIM18P0DKX4 95 aa11.86□□□□□ -0.51
DDR1-229ENST00000396342 HLA-DRB4P13762 266 aa11.86□□□□□ -0.51
DDR1-229ENST00000396342 VAMP1P23763 118 aa11.86□□□□□ -0.51
DDR1-229ENST00000396342 PSMB3P49720 205 aa11.86□□□□□ -0.51
DDR1-229ENST00000396342 MEOX2P50222 304 aa11.86□□□□□ -0.51
DDR1-229ENST00000396342 TMED4Q7Z7H5 227 aa11.86□□□□□ -0.51
DDR1-229ENST00000396342 OR4B1Q8NGF8 309 aa11.86□□□□□ -0.51
DDR1-229ENST00000396342 HLA-DRB4X5D2U9 266 aa11.86□□□□□ -0.51
DDR1-229ENST00000396342 X6R8D5 127 aa11.86□□□□□ -0.51
DDR1-229ENST00000396342 IGKV3-20P01619 116 aa11.85□□□□□ -0.51
DDR1-229ENST00000396342 GIG44P09565 113 aaPredicted RBP11.85□□□□□ -0.51
DDR1-229ENST00000396342 GALR1P47211 349 aa11.85□□□□□ -0.51
DDR1-229ENST00000396342 EMP1P54849 157 aa11.85□□□□□ -0.51
DDR1-229ENST00000396342 SUPT4H1P63272 117 aaKnown RBP11.85□□□□□ -0.51
DDR1-229ENST00000396342 FOXI2Q6ZQN5 318 aa11.85□□□□□ -0.51
DDR1-229ENST00000396342 LINC00336Q6ZUF6 198 aa11.85□□□□□ -0.51
DDR1-229ENST00000396342 LYZL2Q7Z4W2 148 aa11.85□□□□□ -0.51
DDR1-229ENST00000396342 S100A7AQ86SG5 101 aa11.85□□□□□ -0.51
DDR1-229ENST00000396342 UBE2DNLQ8IWF7 75 aa11.85□□□□□ -0.51
DDR1-229ENST00000396342 RFNGQ9Y644 331 aa11.85□□□□□ -0.51
DDR1-229ENST00000396342 S100A5P33763 92 aa11.84□□□□□ -0.51
DDR1-229ENST00000396342 PYDC2Q56P42 97 aa11.84□□□□□ -0.51
DDR1-229ENST00000396342 TMEM128Q5BJH2 165 aa11.84□□□□□ -0.51
DDR1-229ENST00000396342 TOMM5Q8N4H5 51 aa11.84□□□□□ -0.51
DDR1-229ENST00000396342 MCFD2Q8NI22 146 aa11.84□□□□□ -0.51
DDR1-229ENST00000396342 TMEM208Q9BTX3 173 aa11.84□□□□□ -0.51
DDR1-229ENST00000396342 RPRMQ9NS64 109 aa11.84□□□□□ -0.51
DDR1-229ENST00000396342 ELOA3CA0A087WX78 387 aaPredicted RBP11.83□□□□□ -0.52
DDR1-229ENST00000396342 ISLRO14498 428 aa11.83□□□□□ -0.52
DDR1-229ENST00000396342 HBE1P02100 147 aa11.83□□□□□ -0.52
DDR1-229ENST00000396342 AMBPP02760 352 aa11.83□□□□□ -0.52
DDR1-229ENST00000396342 ALDH3B2P48448 385 aa11.83□□□□□ -0.52
DDR1-229ENST00000396342 INPP1P49441 399 aa11.83□□□□□ -0.52
DDR1-229ENST00000396342 GAMTQ14353 236 aa11.83□□□□□ -0.52
DDR1-229ENST00000396342 CSNK1G2-AS1Q8NCQ2 148 aa11.83□□□□□ -0.52
DDR1-229ENST00000396342 C16orf92Q96LL3 132 aa11.83□□□□□ -0.52
DDR1-229ENST00000396342 NEU1Q99519 415 aa11.83□□□□□ -0.52
DDR1-229ENST00000396342 SLC25A21Q9BQT8 299 aaPredicted RBP11.83□□□□□ -0.52
DDR1-229ENST00000396342 PRR13Q9NZ81 148 aa11.83□□□□□ -0.52
DDR1-229ENST00000396342 PSG9Q00887 426 aa11.82□□□□□ -0.52
DDR1-229ENST00000396342 OR2F1Q13607 317 aa11.82□□□□□ -0.52
DDR1-229ENST00000396342 BPIFCQ8NFQ6 507 aa11.82□□□□□ -0.52
DDR1-229ENST00000396342 DYNC2LI1Q8TCX1 351 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms