RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 C10orf113Q5VZT2 155 aa11.97□□□□□ -0.49
VAMP1-202ENST00000396308 RNF152Q8N8N0 203 aa11.97□□□□□ -0.49
VAMP1-202ENST00000396308 GATAD1Q8WUU5 269 aa11.97□□□□□ -0.49
VAMP1-202ENST00000396308 MRPL32Q9BYC8 188 aaKnown RBP11.97□□□□□ -0.49
VAMP1-202ENST00000396308 RNF24Q9Y225 148 aa11.97□□□□□ -0.49
VAMP1-202ENST00000396308 RFNGQ9Y644 331 aa11.97□□□□□ -0.49
VAMP1-202ENST00000396308 ZNF469Q96JG9 3925 aaPredicted RBP11.97□□□□□ -0.49
VAMP1-202ENST00000396308 CTXND1A0A1B0GTU2 59 aa11.96□□□□□ -0.49
VAMP1-202ENST00000396308 BMPR1BO00238 502 aa11.96□□□□□ -0.49
VAMP1-202ENST00000396308 HYPMO75409 117 aa11.96□□□□□ -0.49
VAMP1-202ENST00000396308 IGKV1-17P01599 117 aa11.96□□□□□ -0.49
VAMP1-202ENST00000396308 IGHV3-11P01762 117 aa11.96□□□□□ -0.49
VAMP1-202ENST00000396308 RPLP1P05386 114 aaKnown RBP11.96□□□□□ -0.49
VAMP1-202ENST00000396308 H2AFB1P0C5Y9 115 aa11.96□□□□□ -0.49
VAMP1-202ENST00000396308 PSG1P11464 419 aa11.96□□□□□ -0.49
VAMP1-202ENST00000396308 TAS2R45P59539 299 aa11.96□□□□□ -0.49
VAMP1-202ENST00000396308 ZNF343Q6P1L6 599 aa11.96□□□□□ -0.49
VAMP1-202ENST00000396308 OR1B1Q8NGR6 318 aa11.96□□□□□ -0.49
VAMP1-202ENST00000396308 LINC01006Q8NI28 216 aa11.96□□□□□ -0.49
VAMP1-202ENST00000396308 UBE2E2Q96LR5 201 aa11.96□□□□□ -0.49
VAMP1-202ENST00000396308 PBDC1Q9BVG4 233 aa11.96□□□□□ -0.49
VAMP1-202ENST00000396308 SLC25A22Q9H936 323 aa11.96□□□□□ -0.49
VAMP1-202ENST00000396308 RPRMQ9NS64 109 aa11.96□□□□□ -0.49
VAMP1-202ENST00000396308 PFDN2Q9UHV9 154 aa11.96□□□□□ -0.49
VAMP1-202ENST00000396308 RNF114Q9Y508 228 aa11.96□□□□□ -0.49
VAMP1-202ENST00000396308 CLPSL1A2RUU4 121 aa11.95□□□□□ -0.5
VAMP1-202ENST00000396308 ANKRD34BA5PLL1 514 aa11.95□□□□□ -0.5
VAMP1-202ENST00000396308 F8W735 103 aaPredicted RBP11.95□□□□□ -0.5
VAMP1-202ENST00000396308 YIF1AO95070 293 aa11.95□□□□□ -0.5
VAMP1-202ENST00000396308 IL4P05112 153 aa11.95□□□□□ -0.5
VAMP1-202ENST00000396308 CTSGP08311 255 aa11.95□□□□□ -0.5
VAMP1-202ENST00000396308 NMBP08949 121 aa11.95□□□□□ -0.5
VAMP1-202ENST00000396308 LGALS1P09382 135 aaKnown RBP11.95□□□□□ -0.5
VAMP1-202ENST00000396308 ORM2P19652 201 aa11.95□□□□□ -0.5
VAMP1-202ENST00000396308 GATA2P23769 480 aaPredicted RBP11.95□□□□□ -0.5
VAMP1-202ENST00000396308 NDUFA5Q16718 116 aa11.95□□□□□ -0.5
VAMP1-202ENST00000396308 LCNL1Q6ZST4 164 aa11.95□□□□□ -0.5
VAMP1-202ENST00000396308 ZNF491Q8N8L2 437 aa11.95□□□□□ -0.5
VAMP1-202ENST00000396308 RNF125Q96EQ8 232 aa11.95□□□□□ -0.5
VAMP1-202ENST00000396308 RCC1LQ96I51 464 aaKnown RBP11.95□□□□□ -0.5
VAMP1-202ENST00000396308 VSIRQ9H7M9 311 aa11.95□□□□□ -0.5
VAMP1-202ENST00000396308 DNAJC4Q9NNZ3 241 aa11.95□□□□□ -0.5
VAMP1-202ENST00000396308 DOK5Q9P104 306 aa11.95□□□□□ -0.5
VAMP1-202ENST00000396308 PEF1Q9UBV8 284 aaKnown RBP11.95□□□□□ -0.5
VAMP1-202ENST00000396308 HIGD1AQ9Y241 93 aa11.95□□□□□ -0.5
VAMP1-202ENST00000396308 NIPBLQ6KC79 2804 aaeCLIP11.94□□□□□ -0.5
VAMP1-202ENST00000396308 MAP1LC3B2A6NCE7 125 aa11.94□□□□□ -0.5
VAMP1-202ENST00000396308 NUDT19A8MXV4 375 aa11.94□□□□□ -0.5
VAMP1-202ENST00000396308 HAX1O00165 279 aa11.94□□□□□ -0.5
VAMP1-202ENST00000396308 GGCTO75223 188 aaKnown RBP11.94□□□□□ -0.5
VAMP1-202ENST00000396308 OR2C1O95371 312 aa11.94□□□□□ -0.5
VAMP1-202ENST00000396308 PLP1P60201 277 aa11.94□□□□□ -0.5
VAMP1-202ENST00000396308 FAM78BQ5VT40 261 aa11.94□□□□□ -0.5
VAMP1-202ENST00000396308 C10orf99Q6UWK7 81 aa11.94□□□□□ -0.5
VAMP1-202ENST00000396308 MYOZ3Q8TDC0 251 aa11.94□□□□□ -0.5
VAMP1-202ENST00000396308 SFT2D1Q8WV19 159 aa11.94□□□□□ -0.5
VAMP1-202ENST00000396308 NARS2Q96I59 477 aaKnown RBP11.94□□□□□ -0.5
VAMP1-202ENST00000396308 MAP1LC3BQ9GZQ8 125 aa11.94□□□□□ -0.5
VAMP1-202ENST00000396308 PUS1Q9Y606 427 aaKnown RBP eCLIP11.94□□□□□ -0.5
VAMP1-202ENST00000396308 NSD1Q96L73 2696 aaPredicted RBP11.94□□□□□ -0.5
VAMP1-202ENST00000396308 SEC14L6B5MCN3 397 aa11.93□□□□□ -0.5
VAMP1-202ENST00000396308 PPP5D1E7EU14 171 aa11.93□□□□□ -0.5
VAMP1-202ENST00000396308 FHITP49789 147 aa11.93□□□□□ -0.5
VAMP1-202ENST00000396308 KHDC3LQ587J8 217 aa11.93□□□□□ -0.5
VAMP1-202ENST00000396308 IQCF2Q8IXL9 164 aa11.93□□□□□ -0.5
VAMP1-202ENST00000396308 PCNPQ8WW12 178 aaKnown RBP11.93□□□□□ -0.5
VAMP1-202ENST00000396308 WFDC12Q8WWY7 111 aa11.93□□□□□ -0.5
VAMP1-202ENST00000396308 OR5B12Q96R08 314 aa11.93□□□□□ -0.5
VAMP1-202ENST00000396308 CHRDL1Q9BU40 450 aa11.93□□□□□ -0.5
VAMP1-202ENST00000396308 HRH4Q9H3N8 390 aa11.93□□□□□ -0.5
VAMP1-202ENST00000396308 TECRQ9NZ01 308 aaKnown RBP11.93□□□□□ -0.5
VAMP1-202ENST00000396308 RABAC1Q9UI14 185 aa11.93□□□□□ -0.5
VAMP1-202ENST00000396308 FUT9Q9Y231 359 aa11.93□□□□□ -0.5
VAMP1-202ENST00000396308 IFNA1P01562 189 aa11.92□□□□□ -0.5
VAMP1-202ENST00000396308 ADMP35318 185 aa11.92□□□□□ -0.5
VAMP1-202ENST00000396308 CDX1P47902 265 aaPredicted RBP11.92□□□□□ -0.5
VAMP1-202ENST00000396308 FOXL1Q12952 345 aa11.92□□□□□ -0.5
VAMP1-202ENST00000396308 GCSAMLQ5JQS6 135 aa11.92□□□□□ -0.5
VAMP1-202ENST00000396308 LCN15Q6UWW0 184 aa11.92□□□□□ -0.5
VAMP1-202ENST00000396308 RPP25LQ8N5L8 163 aaKnown RBP11.92□□□□□ -0.5
VAMP1-202ENST00000396308 C4orf3Q8WVX3 66 aa11.92□□□□□ -0.5
VAMP1-202ENST00000396308 RAB24Q969Q5 203 aa11.92□□□□□ -0.5
VAMP1-202ENST00000396308 PLA2G2EQ9NZK7 142 aa11.92□□□□□ -0.5
VAMP1-202ENST00000396308 WI2-2373I1.2A0A1W2PRP0 233 aa11.91□□□□□ -0.5
VAMP1-202ENST00000396308 NDUFA4O00483 81 aa11.91□□□□□ -0.5
VAMP1-202ENST00000396308 CXorf1O96002 111 aa11.91□□□□□ -0.5
VAMP1-202ENST00000396308 ZP3P21754 424 aa11.91□□□□□ -0.5
VAMP1-202ENST00000396308 PPT1P50897 306 aa11.91□□□□□ -0.5
VAMP1-202ENST00000396308 RPEL1Q2QD12 228 aa11.91□□□□□ -0.5
VAMP1-202ENST00000396308 FAM106AQ4KMX7 169 aa11.91□□□□□ -0.5
VAMP1-202ENST00000396308 LINC00305Q7Z4B0 112 aa11.91□□□□□ -0.5
VAMP1-202ENST00000396308 KLHL30-AS1Q8NEE0 82 aa11.91□□□□□ -0.5
VAMP1-202ENST00000396308 STXBP6Q8NFX7 210 aa11.91□□□□□ -0.5
VAMP1-202ENST00000396308 MBD3L1Q8WWY6 194 aa11.91□□□□□ -0.5
VAMP1-202ENST00000396308 METTL26Q96S19 204 aa11.91□□□□□ -0.5
VAMP1-202ENST00000396308 TRAV1-1A0A0B4J248 108 aa11.9□□□□□ -0.5
VAMP1-202ENST00000396308 C8orf88P0DMB2 117 aa11.9□□□□□ -0.5
VAMP1-202ENST00000396308 IL34Q6ZMJ4 242 aa11.9□□□□□ -0.5
VAMP1-202ENST00000396308 PQLC2Q6ZP29 291 aa11.9□□□□□ -0.5
VAMP1-202ENST00000396308 DPF1Q92782 380 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms