RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 U3KQ87 197 aa13.06□□□□□ -0.32
CXCL12-204ENST00000395793 ELOA3CA0A087WX78 387 aaPredicted RBP13.05□□□□□ -0.32
CXCL12-204ENST00000395793 PITX3O75364 302 aa13.05□□□□□ -0.32
CXCL12-204ENST00000395793 EIF2B2P49770 351 aaKnown RBP13.05□□□□□ -0.32
CXCL12-204ENST00000395793 PRR20EP86478 221 aa13.05□□□□□ -0.32
CXCL12-204ENST00000395793 PRR20CP86479 221 aa13.05□□□□□ -0.32
CXCL12-204ENST00000395793 PRR20DP86480 221 aa13.05□□□□□ -0.32
CXCL12-204ENST00000395793 PRR20BP86481 221 aa13.05□□□□□ -0.32
CXCL12-204ENST00000395793 PRR20AP86496 221 aa13.05□□□□□ -0.32
CXCL12-204ENST00000395793 ZNF79Q15937 498 aa13.05□□□□□ -0.32
CXCL12-204ENST00000395793 SIGLEC15Q6ZMC9 328 aa13.05□□□□□ -0.32
CXCL12-204ENST00000395793 NRN1Q9NPD7 142 aa13.05□□□□□ -0.32
CXCL12-204ENST00000395793 CACFD1Q9UGQ2 172 aa13.05□□□□□ -0.32
CXCL12-204ENST00000395793 VPS13DQ5THJ4 4388 aa13.04□□□□□ -0.32
CXCL12-204ENST00000395793 NOL3O60936 208 aaKnown RBP13.04□□□□□ -0.32
CXCL12-204ENST00000395793 IFNA4P05014 189 aa13.04□□□□□ -0.32
CXCL12-204ENST00000395793 AP2S1P53680 142 aaPredicted RBP13.04□□□□□ -0.32
CXCL12-204ENST00000395793 SRPXP78539 464 aa13.04□□□□□ -0.32
CXCL12-204ENST00000395793 ZNF90Q03938 601 aa13.04□□□□□ -0.32
CXCL12-204ENST00000395793 GAMTQ14353 236 aa13.04□□□□□ -0.32
CXCL12-204ENST00000395793 TMEM41BQ5BJD5 291 aa13.04□□□□□ -0.32
CXCL12-204ENST00000395793 GSG1LQ6UXU4 331 aa13.04□□□□□ -0.32
CXCL12-204ENST00000395793 TMED4Q7Z7H5 227 aa13.04□□□□□ -0.32
CXCL12-204ENST00000395793 OR1S1Q8NH92 325 aa13.04□□□□□ -0.32
CXCL12-204ENST00000395793 RNF125Q96EQ8 232 aa13.04□□□□□ -0.32
CXCL12-204ENST00000395793 HRH4Q9H3N8 390 aa13.04□□□□□ -0.32
CXCL12-204ENST00000395793 IAPPP10997 89 aa13.03□□□□□ -0.32
CXCL12-204ENST00000395793 ANXA3P12429 323 aa13.03□□□□□ -0.32
CXCL12-204ENST00000395793 MIFP14174 115 aa13.03□□□□□ -0.32
CXCL12-204ENST00000395793 DEFB1P60022 68 aa13.03□□□□□ -0.32
CXCL12-204ENST00000395793 C2CD4CQ8TF44 421 aa13.03□□□□□ -0.32
CXCL12-204ENST00000395793 PBDC1Q9BVG4 233 aa13.03□□□□□ -0.32
CXCL12-204ENST00000395793 DNAH10Q8IVF4 4471 aa13.02□□□□□ -0.32
CXCL12-204ENST00000395793 H3BMM0 161 aa13.02□□□□□ -0.33
CXCL12-204ENST00000395793 HLA-DMBP28068 263 aa13.02□□□□□ -0.33
CXCL12-204ENST00000395793 PYDC2Q56P42 97 aa13.02□□□□□ -0.33
CXCL12-204ENST00000395793 TMEM128Q5BJH2 165 aa13.02□□□□□ -0.33
CXCL12-204ENST00000395793 GDF5OSQ5U4N7 250 aa13.02□□□□□ -0.33
CXCL12-204ENST00000395793 WDR12Q9GZL7 423 aaKnown RBP13.02□□□□□ -0.33
CXCL12-204ENST00000395793 TBC1D24Q9ULP9 559 aa13.02□□□□□ -0.33
CXCL12-204ENST00000395793 APLNQ9ULZ1 77 aa13.02□□□□□ -0.33
CXCL12-204ENST00000395793 CELA1Q9UNI1 258 aa13.02□□□□□ -0.33
CXCL12-204ENST00000395793 IGKV1OR2-108A0A075B7D4 117 aa13.01□□□□□ -0.33
CXCL12-204ENST00000395793 DUXBA0A1W2PPF3 345 aa13.01□□□□□ -0.33
CXCL12-204ENST00000395793 ZFP92A6NM28 416 aa13.01□□□□□ -0.33
CXCL12-204ENST00000395793 FAUP35544 74 aaKnown RBP13.01□□□□□ -0.33
CXCL12-204ENST00000395793 GPX4P36969 197 aaPredicted RBP13.01□□□□□ -0.33
CXCL12-204ENST00000395793 Q6ZTC4 211 aa13.01□□□□□ -0.33
CXCL12-204ENST00000395793 TOMM5Q8N4H5 51 aa13.01□□□□□ -0.33
CXCL12-204ENST00000395793 LRTM2Q8N967 370 aa13.01□□□□□ -0.33
CXCL12-204ENST00000395793 SLC35E1Q96K37 410 aa13.01□□□□□ -0.33
CXCL12-204ENST00000395793 SEPSECSQ9HD40 501 aaKnown RBP13.01□□□□□ -0.33
CXCL12-204ENST00000395793 SOCS3O14543 225 aa13□□□□□ -0.33
CXCL12-204ENST00000395793 HLA-DRB4P13762 266 aa13□□□□□ -0.33
CXCL12-204ENST00000395793 VAMP1P23763 118 aa13□□□□□ -0.33
CXCL12-204ENST00000395793 SNRPD3P62318 126 aaKnown RBP13□□□□□ -0.33
CXCL12-204ENST00000395793 PPP1R1AQ13522 171 aa13□□□□□ -0.33
CXCL12-204ENST00000395793 OR8G2PQ6IF36 304 aa13□□□□□ -0.33
CXCL12-204ENST00000395793 XCL2Q9UBD3 114 aa13□□□□□ -0.33
CXCL12-204ENST00000395793 HLA-DRB4X5D2U9 266 aa13□□□□□ -0.33
CXCL12-204ENST00000395793 IGLL5B9A064 214 aa12.99□□□□□ -0.33
CXCL12-204ENST00000395793 PRSS46E5RG02 174 aa12.99□□□□□ -0.33
CXCL12-204ENST00000395793 ATP5IP56385 69 aaPredicted RBP12.99□□□□□ -0.33
CXCL12-204ENST00000395793 LYZP61626 148 aa12.99□□□□□ -0.33
CXCL12-204ENST00000395793 OR2F1Q13607 317 aa12.99□□□□□ -0.33
CXCL12-204ENST00000395793 CCDC190Q86UF4 302 aa12.99□□□□□ -0.33
CXCL12-204ENST00000395793 DNAH6Q9C0G6 4158 aa12.99□□□□□ -0.33
CXCL12-204ENST00000395793 C11orf94C9JXX5 98 aa12.98□□□□□ -0.33
CXCL12-204ENST00000395793 SFT2D2O95562 160 aa12.98□□□□□ -0.33
CXCL12-204ENST00000395793 SLC25A6P12236 298 aa12.98□□□□□ -0.33
CXCL12-204ENST00000395793 NKX2-1P43699 371 aaPredicted RBP12.98□□□□□ -0.33
CXCL12-204ENST00000395793 AP3S2P59780 193 aa12.98□□□□□ -0.33
CXCL12-204ENST00000395793 ZNF767PQ75MW2 155 aa12.98□□□□□ -0.33
CXCL12-204ENST00000395793 THAP8Q8NA92 274 aa12.98□□□□□ -0.33
CXCL12-204ENST00000395793 TRGV9Q99603 122 aa12.98□□□□□ -0.33
CXCL12-204ENST00000395793 MAGT1Q9H0U3 335 aa12.98□□□□□ -0.33
CXCL12-204ENST00000395793 RBM38Q9H0Z9 239 aaKnown RBP12.98□□□□□ -0.33
CXCL12-204ENST00000395793 NUP62P37198 522 aaPredicted RBP12.97□□□□□ -0.33
CXCL12-204ENST00000395793 TCTAP57738 103 aa12.97□□□□□ -0.33
CXCL12-204ENST00000395793 FXYD7P58549 80 aa12.97□□□□□ -0.33
CXCL12-204ENST00000395793 SLC25A21Q9BQT8 299 aaPredicted RBP12.97□□□□□ -0.33
CXCL12-204ENST00000395793 SCRT1Q9BWW7 348 aa12.97□□□□□ -0.33
CXCL12-204ENST00000395793 PAIP2BQ9ULR5 123 aaKnown RBP12.97□□□□□ -0.33
CXCL12-204ENST00000395793 TRAV10A0A0B4J240 114 aa12.96□□□□□ -0.33
CXCL12-204ENST00000395793 IGKV3-20P01619 116 aa12.96□□□□□ -0.33
CXCL12-204ENST00000395793 HOXB5P09067 269 aa12.96□□□□□ -0.33
CXCL12-204ENST00000395793 C12orf74Q32Q52 190 aa12.96□□□□□ -0.33
CXCL12-204ENST00000395793 C17orf77Q96MU5 243 aa12.96□□□□□ -0.33
CXCL12-204ENST00000395793 C1QTNF4Q9BXJ3 329 aa12.96□□□□□ -0.33
CXCL12-204ENST00000395793 SAV1Q9H4B6 383 aaPredicted RBP12.96□□□□□ -0.33
CXCL12-204ENST00000395793 TMED3Q9Y3Q3 217 aa12.96□□□□□ -0.33
CXCL12-204ENST00000395793 IGHV4-4A0A075B6R2 117 aa12.95□□□□□ -0.34
CXCL12-204ENST00000395793 WRBO00258 174 aa12.95□□□□□ -0.34
CXCL12-204ENST00000395793 NUTF2P61970 127 aaKnown RBP12.95□□□□□ -0.34
CXCL12-204ENST00000395793 RAB11AP62491 216 aa12.95□□□□□ -0.34
CXCL12-204ENST00000395793 GGNBP1Q5YKI7 109 aa12.95□□□□□ -0.34
CXCL12-204ENST00000395793 ZNF705AQ6ZN79 300 aaPredicted RBP12.95□□□□□ -0.34
CXCL12-204ENST00000395793 TMEM182Q6ZP80 229 aaPredicted RBP12.95□□□□□ -0.34
CXCL12-204ENST00000395793 CENPSQ8N2Z9 138 aa12.95□□□□□ -0.34
CXCL12-204ENST00000395793 ZNF709Q8N972 641 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms