RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 K7EMT4 169 aa12.5□□□□□ -0.41
CXCL1-201ENST00000395761 CST7O76096 145 aa12.5□□□□□ -0.41
CXCL1-201ENST00000395761 IGLC1P0CG04 106 aa12.5□□□□□ -0.41
CXCL1-201ENST00000395761 HBG1P69891 147 aa12.5□□□□□ -0.41
CXCL1-201ENST00000395761 HBG2P69892 147 aa12.5□□□□□ -0.41
CXCL1-201ENST00000395761 ATP6V1FQ16864 119 aa12.5□□□□□ -0.41
CXCL1-201ENST00000395761 DEFB121Q5J5C9 76 aa12.5□□□□□ -0.41
CXCL1-201ENST00000395761 OR8G2PQ6IF36 304 aa12.5□□□□□ -0.41
CXCL1-201ENST00000395761 ACOT7LQ6ZUV0 252 aa12.5□□□□□ -0.41
CXCL1-201ENST00000395761 DAZ1Q9NQZ3 744 aaKnown RBP12.5□□□□□ -0.41
CXCL1-201ENST00000395761 TECRQ9NZ01 308 aaKnown RBP12.5□□□□□ -0.41
CXCL1-201ENST00000395761 MRPL27Q9P0M9 148 aaKnown RBP12.5□□□□□ -0.41
CXCL1-201ENST00000395761 PUS1Q9Y606 427 aaKnown RBP eCLIP12.5□□□□□ -0.41
CXCL1-201ENST00000395761 TRAV30A0A087WSZ9 112 aa12.49□□□□□ -0.41
CXCL1-201ENST00000395761 ZNF785A8K8V0 405 aa12.49□□□□□ -0.41
CXCL1-201ENST00000395761 OR10J1P30954 320 aa12.49□□□□□ -0.41
CXCL1-201ENST00000395761 OR2F1Q13607 317 aa12.49□□□□□ -0.41
CXCL1-201ENST00000395761 GAMTQ14353 236 aa12.49□□□□□ -0.41
CXCL1-201ENST00000395761 BTNL8Q6UX41 500 aa12.49□□□□□ -0.41
CXCL1-201ENST00000395761 ZNF600Q6ZNG1 722 aa12.49□□□□□ -0.41
CXCL1-201ENST00000395761 MARC2Q969Z3 335 aa12.49□□□□□ -0.41
CXCL1-201ENST00000395761 MFFQ9GZY8 342 aa12.49□□□□□ -0.41
CXCL1-201ENST00000395761 ZFAND3Q9H8U3 227 aa12.49□□□□□ -0.41
CXCL1-201ENST00000395761 LSM4Q9Y4Z0 139 aaKnown RBP12.49□□□□□ -0.41
CXCL1-201ENST00000395761 SORL1Q92673 2214 aa12.48□□□□□ -0.41
CXCL1-201ENST00000395761 IGHV3-49A0A0A0MS15 119 aa12.48□□□□□ -0.41
CXCL1-201ENST00000395761 SLC38A11Q08AI6 406 aa12.48□□□□□ -0.41
CXCL1-201ENST00000395761 ZNF345Q14585 488 aa12.48□□□□□ -0.41
CXCL1-201ENST00000395761 VWC2Q2TAL6 325 aa12.48□□□□□ -0.41
CXCL1-201ENST00000395761 ZFP69Q49AA0 526 aa12.48□□□□□ -0.41
CXCL1-201ENST00000395761 LCN12Q6JVE5 192 aa12.48□□□□□ -0.41
CXCL1-201ENST00000395761 OR1S2Q8NGQ3 325 aa12.48□□□□□ -0.41
CXCL1-201ENST00000395761 OR2K2Q8NGT1 345 aa12.48□□□□□ -0.41
CXCL1-201ENST00000395761 A0A0D9SG52 128 aa12.47□□□□□ -0.41
CXCL1-201ENST00000395761 IGHV7-4-1A0A0J9YVY3 117 aa12.47□□□□□ -0.41
CXCL1-201ENST00000395761 ARPC5O15511 151 aa12.47□□□□□ -0.41
CXCL1-201ENST00000395761 TMEM61Q8N0U2 210 aa12.47□□□□□ -0.41
CXCL1-201ENST00000395761 TMEM217Q8N7C4 229 aa12.47□□□□□ -0.41
CXCL1-201ENST00000395761 OR5C1Q8NGR4 320 aa12.47□□□□□ -0.41
CXCL1-201ENST00000395761 PPP1R14BQ96C90 147 aa12.47□□□□□ -0.41
CXCL1-201ENST00000395761 SLC35E1Q96K37 410 aa12.47□□□□□ -0.41
CXCL1-201ENST00000395761 NPVFQ9HCQ7 196 aa12.47□□□□□ -0.41
CXCL1-201ENST00000395761 SMPXQ9UHP9 88 aa12.47□□□□□ -0.41
CXCL1-201ENST00000395761 IGKV1D-37A0A075B6S9 117 aa12.46□□□□□ -0.41
CXCL1-201ENST00000395761 IGHV3OR16-13A0A075B7E8 117 aa12.46□□□□□ -0.41
CXCL1-201ENST00000395761 IGHV3-74A0A0B4J1X5 117 aa12.46□□□□□ -0.41
CXCL1-201ENST00000395761 SCGB2A1O75556 95 aa12.46□□□□□ -0.41
CXCL1-201ENST00000395761 YPEL3P61236 119 aaPredicted RBP12.46□□□□□ -0.41
CXCL1-201ENST00000395761 GUCA2BQ16661 112 aa12.46□□□□□ -0.41
CXCL1-201ENST00000395761 TMEM144Q7Z5S9 345 aa12.46□□□□□ -0.41
CXCL1-201ENST00000395761 Q8N1Y9 231 aa12.46□□□□□ -0.41
CXCL1-201ENST00000395761 KCNRGQ8N5I3 272 aa12.46□□□□□ -0.41
CXCL1-201ENST00000395761 TMEM147Q9BVK8 224 aa12.46□□□□□ -0.41
CXCL1-201ENST00000395761 CHEK1O14757 476 aa12.45□□□□□ -0.42
CXCL1-201ENST00000395761 TAAR5O14804 337 aa12.45□□□□□ -0.42
CXCL1-201ENST00000395761 DFFBO76075 338 aa12.45□□□□□ -0.42
CXCL1-201ENST00000395761 APOHP02749 345 aaPredicted RBP12.45□□□□□ -0.42
CXCL1-201ENST00000395761 CXCL2P19875 107 aa12.45□□□□□ -0.42
CXCL1-201ENST00000395761 EIF2B2P49770 351 aaKnown RBP12.45□□□□□ -0.42
CXCL1-201ENST00000395761 LGALSLQ3ZCW2 172 aaPredicted RBP12.45□□□□□ -0.42
CXCL1-201ENST00000395761 LILRB2Q8N423 598 aa12.45□□□□□ -0.42
CXCL1-201ENST00000395761 RHPN1-AS1Q9BWJ2 59 aa12.45□□□□□ -0.42
CXCL1-201ENST00000395761 UQCC1Q9NVA1 299 aa12.45□□□□□ -0.42
CXCL1-201ENST00000395761 AP2S1P53680 142 aaPredicted RBP12.44□□□□□ -0.42
CXCL1-201ENST00000395761 ZNF90Q03938 601 aa12.44□□□□□ -0.42
CXCL1-201ENST00000395761 THAP8Q8NA92 274 aa12.44□□□□□ -0.42
CXCL1-201ENST00000395761 Q8WTZ3 238 aa12.44□□□□□ -0.42
CXCL1-201ENST00000395761 RNF2Q99496 336 aa12.44□□□□□ -0.42
CXCL1-201ENST00000395761 ATP5SQ99766 215 aa12.44□□□□□ -0.42
CXCL1-201ENST00000395761 GINS3Q9BRX5 216 aa12.44□□□□□ -0.42
CXCL1-201ENST00000395761 PARD6GQ9BYG4 376 aaPredicted RBP12.44□□□□□ -0.42
CXCL1-201ENST00000395761 WFDC1Q9HC57 220 aa12.44□□□□□ -0.42
CXCL1-201ENST00000395761 FBXL17Q9UF56 701 aa12.44□□□□□ -0.42
CXCL1-201ENST00000395761 IGKV1OR2-108A0A075B7D4 117 aa12.43□□□□□ -0.42
CXCL1-201ENST00000395761 IGHV3-66A0A0C4DH42 116 aa12.43□□□□□ -0.42
CXCL1-201ENST00000395761 ZFP92A6NM28 416 aa12.43□□□□□ -0.42
CXCL1-201ENST00000395761 TOMM40O96008 361 aa12.43□□□□□ -0.42
CXCL1-201ENST00000395761 RD3LP0DJH9 198 aa12.43□□□□□ -0.42
CXCL1-201ENST00000395761 PSG1P11464 419 aa12.43□□□□□ -0.42
CXCL1-201ENST00000395761 RBPMS2Q6ZRY4 209 aaKnown RBP12.43□□□□□ -0.42
CXCL1-201ENST00000395761 ST8SIA2Q92186 375 aa12.43□□□□□ -0.42
CXCL1-201ENST00000395761 WDR83OSQ9Y284 106 aa12.43□□□□□ -0.42
CXCL1-201ENST00000395761 TGP01266 2768 aa12.42□□□□□ -0.42
CXCL1-201ENST00000395761 TRAV25A0A0B4J276 109 aa12.42□□□□□ -0.42
CXCL1-201ENST00000395761 CD7P09564 240 aa12.42□□□□□ -0.42
CXCL1-201ENST00000395761 NPPCP23582 126 aa12.42□□□□□ -0.42
CXCL1-201ENST00000395761 CLINT1Q14677 625 aa12.42□□□□□ -0.42
CXCL1-201ENST00000395761 LAMTOR1Q6IAA8 161 aa12.42□□□□□ -0.42
CXCL1-201ENST00000395761 TEPPQ6URK8 271 aa12.42□□□□□ -0.42
CXCL1-201ENST00000395761 TMUB2Q71RG4 321 aa12.42□□□□□ -0.42
CXCL1-201ENST00000395761 C9orf62Q8N4C0 152 aa12.42□□□□□ -0.42
CXCL1-201ENST00000395761 TRGV9Q99603 122 aa12.42□□□□□ -0.42
CXCL1-201ENST00000395761 SMIM3Q9BZL3 60 aa12.42□□□□□ -0.42
CXCL1-201ENST00000395761 VSIRQ9H7M9 311 aa12.42□□□□□ -0.42
CXCL1-201ENST00000395761 SMAD5-AS1Q9Y6J3 95 aa12.42□□□□□ -0.42
CXCL1-201ENST00000395761 MPDU1O75352 247 aa12.41□□□□□ -0.42
CXCL1-201ENST00000395761 IL4P05112 153 aa12.41□□□□□ -0.42
CXCL1-201ENST00000395761 CRYBB3P26998 211 aa12.41□□□□□ -0.42
CXCL1-201ENST00000395761 CD81P60033 236 aa12.41□□□□□ -0.42
CXCL1-201ENST00000395761 AKR1C1Q04828 323 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms