RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 PRSS57Q6UWY2 283 aa10.13□□□□□ -0.79
SIN3A-202ENST00000394947 MDS2Q8NDY4 140 aa10.13□□□□□ -0.79
SIN3A-202ENST00000394947 C18orf12Q96KH6 178 aa10.13□□□□□ -0.79
SIN3A-202ENST00000394947 SHISA3A0PJX4 238 aa10.13□□□□□ -0.79
SIN3A-202ENST00000394947 GATA4P43694 442 aa10.13□□□□□ -0.79
SIN3A-202ENST00000394947 C15orf61A6NNL5 157 aa10.13□□□□□ -0.79
SIN3A-202ENST00000394947 SH2D1AO60880 128 aa10.13□□□□□ -0.79
SIN3A-202ENST00000394947 WNT2P09544 360 aa10.13□□□□□ -0.79
SIN3A-202ENST00000394947 C9orf153Q5TBE3 101 aa10.13□□□□□ -0.79
SIN3A-202ENST00000394947 LINC01590Q5TEZ4 76 aa10.13□□□□□ -0.79
SIN3A-202ENST00000394947 ASPHD1Q5U4P2 390 aa10.13□□□□□ -0.79
SIN3A-202ENST00000394947 RSPO3Q9BXY4 272 aaPredicted RBP10.13□□□□□ -0.79
SIN3A-202ENST00000394947 H3BMM0 161 aa10.12□□□□□ -0.79
SIN3A-202ENST00000394947 FAM90A2PQ658T7 463 aa10.12□□□□□ -0.79
SIN3A-202ENST00000394947 UBE2WQ96B02 151 aa10.12□□□□□ -0.79
SIN3A-202ENST00000394947 TMEM133Q9H2Q1 129 aa10.12□□□□□ -0.79
SIN3A-202ENST00000394947 KLF12Q9Y4X4 402 aa10.12□□□□□ -0.79
SIN3A-202ENST00000394947 TRAV41A0A0B4J266 112 aa10.12□□□□□ -0.79
SIN3A-202ENST00000394947 DKK1O94907 266 aa10.12□□□□□ -0.79
SIN3A-202ENST00000394947 NR2C2APQ86WQ0 139 aa10.12□□□□□ -0.79
SIN3A-202ENST00000394947 CHCHD2Q9Y6H1 151 aaPredicted RBP10.12□□□□□ -0.79
SIN3A-202ENST00000394947 CEACAM8P31997 349 aaPredicted RBP10.12□□□□□ -0.79
SIN3A-202ENST00000394947 PRIMA1Q86XR5 153 aa10.12□□□□□ -0.79
SIN3A-202ENST00000394947 TMEM158Q8WZ71 300 aa10.12□□□□□ -0.79
SIN3A-202ENST00000394947 LINC00312Q9Y6C7 94 aa10.12□□□□□ -0.79
SIN3A-202ENST00000394947 PQLC2LA1A4F0 135 aa10.12□□□□□ -0.79
SIN3A-202ENST00000394947 HAMPP81172 84 aa10.12□□□□□ -0.79
SIN3A-202ENST00000394947 THAP8Q8NA92 274 aa10.12□□□□□ -0.79
SIN3A-202ENST00000394947 MPDZO75970 2070 aa10.12□□□□□ -0.79
SIN3A-202ENST00000394947 IGHMP01871 453 aa10.12□□□□□ -0.79
SIN3A-202ENST00000394947 MORN5Q5VZ52 161 aa10.12□□□□□ -0.79
SIN3A-202ENST00000394947 POLR2AP24928 1970 aaKnown RBP10.12□□□□□ -0.79
SIN3A-202ENST00000394947 Q6AWC8 147 aa10.11□□□□□ -0.79
SIN3A-202ENST00000394947 TMEM144Q7Z5S9 345 aa10.11□□□□□ -0.79
SIN3A-202ENST00000394947 F5H768 121 aa10.11□□□□□ -0.79
SIN3A-202ENST00000394947 HSD52Q0P140 79 aa10.11□□□□□ -0.79
SIN3A-202ENST00000394947 HIST1H2BKO60814 126 aa10.11□□□□□ -0.79
SIN3A-202ENST00000394947 HIST1H2BJP06899 126 aa10.11□□□□□ -0.79
SIN3A-202ENST00000394947 HIST1H2BOP23527 126 aa10.11□□□□□ -0.79
SIN3A-202ENST00000394947 HIST1H2BBP33778 126 aa10.11□□□□□ -0.79
SIN3A-202ENST00000394947 HIST1H2BDP58876 126 aa10.11□□□□□ -0.79
SIN3A-202ENST00000394947 HIST1H2BCP62807 126 aa10.11□□□□□ -0.79
SIN3A-202ENST00000394947 HIST2H2BEQ16778 126 aa10.11□□□□□ -0.79
SIN3A-202ENST00000394947 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.11□□□□□ -0.79
SIN3A-202ENST00000394947 HIST1H2BHQ93079 126 aa10.11□□□□□ -0.79
SIN3A-202ENST00000394947 HIST1H2BNQ99877 126 aa10.11□□□□□ -0.79
SIN3A-202ENST00000394947 HIST1H2BMQ99879 126 aa10.11□□□□□ -0.79
SIN3A-202ENST00000394947 HGFACQ04756 655 aa10.11□□□□□ -0.79
SIN3A-202ENST00000394947 ADAMTSL5Q6ZMM2 481 aa10.11□□□□□ -0.79
SIN3A-202ENST00000394947 LYZL4Q96KX0 146 aa10.11□□□□□ -0.79
SIN3A-202ENST00000394947 KLK9Q9UKQ9 250 aa10.11□□□□□ -0.79
SIN3A-202ENST00000394947 TRAV3A0A0B4J244 114 aa10.11□□□□□ -0.79
SIN3A-202ENST00000394947 RP1L1Q8IWN7 2480 aaPredicted RBP10.11□□□□□ -0.79
SIN3A-202ENST00000394947 TINCRA0A1B0GVN0 87 aa10.11□□□□□ -0.79
SIN3A-202ENST00000394947 RPL36AP83881 106 aaKnown RBP10.11□□□□□ -0.79
SIN3A-202ENST00000394947 RNASE13Q5GAN3 156 aaKnown RBP10.11□□□□□ -0.79
SIN3A-202ENST00000394947 CACNG8Q8WXS5 425 aa10.11□□□□□ -0.79
SIN3A-202ENST00000394947 RASL10AQ92737 203 aa10.11□□□□□ -0.79
SIN3A-202ENST00000394947 RPL36ALQ969Q0 106 aaKnown RBP10.11□□□□□ -0.79
SIN3A-202ENST00000394947 ALS2Q96Q42 1657 aa10.11□□□□□ -0.79
SIN3A-202ENST00000394947 FANCMQ8IYD8 2048 aa10.1□□□□□ -0.79
SIN3A-202ENST00000394947 GAGE12JA6NER3 117 aa10.1□□□□□ -0.79
SIN3A-202ENST00000394947 GAGE1Q13065 139 aa10.1□□□□□ -0.79
SIN3A-202ENST00000394947 GAGE4Q13068 117 aa10.1□□□□□ -0.79
SIN3A-202ENST00000394947 GAGE5Q13069 117 aa10.1□□□□□ -0.79
SIN3A-202ENST00000394947 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.1□□□□□ -0.79
SIN3A-202ENST00000394947 A0A1B0GW15 77 aa10.1□□□□□ -0.79
SIN3A-202ENST00000394947 PMVKQ15126 192 aa10.1□□□□□ -0.79
SIN3A-202ENST00000394947 ATP6V0BQ99437 205 aa10.1□□□□□ -0.79
SIN3A-202ENST00000394947 KIR3DS1Q14943 382 aa10.1□□□□□ -0.79
SIN3A-202ENST00000394947 SS18Q15532 418 aa10.1□□□□□ -0.79
SIN3A-202ENST00000394947 RNF222A6NCQ9 220 aa10.1□□□□□ -0.79
SIN3A-202ENST00000394947 STPG4Q8N801 248 aa10.1□□□□□ -0.79
SIN3A-202ENST00000394947 C5orf67F2Z3F1 127 aa10.09□□□□□ -0.79
SIN3A-202ENST00000394947 COX5BP10606 129 aa10.09□□□□□ -0.79
SIN3A-202ENST00000394947 FOXF2Q12947 444 aa10.09□□□□□ -0.79
SIN3A-202ENST00000394947 SPRR3Q9UBC9 169 aa10.09□□□□□ -0.79
SIN3A-202ENST00000394947 KIAA1551Q9HCM1 1747 aa10.09□□□□□ -0.79
SIN3A-202ENST00000394947 MESP1Q9BRJ9 268 aa10.09□□□□□ -0.79
SIN3A-202ENST00000394947 TIMM21Q9BVV7 248 aa10.09□□□□□ -0.79
SIN3A-202ENST00000394947 ZNF561-AS1K7EIQ3 104 aa10.09□□□□□ -0.79
SIN3A-202ENST00000394947 PVRIGQ6DKI7 326 aa10.09□□□□□ -0.79
SIN3A-202ENST00000394947 FGFBP3Q8TAT2 258 aa10.09□□□□□ -0.79
SIN3A-202ENST00000394947 FAM110DQ8TAY7 271 aaPredicted RBP10.09□□□□□ -0.79
SIN3A-202ENST00000394947 RNF126Q9BV68 326 aa10.09□□□□□ -0.79
SIN3A-202ENST00000394947 IGHV1-18A0A0C4DH31 117 aa10.09□□□□□ -0.79
SIN3A-202ENST00000394947 H3BUX3 64 aa10.09□□□□□ -0.79
SIN3A-202ENST00000394947 TCTEX1D4Q5JR98 221 aa10.09□□□□□ -0.79
SIN3A-202ENST00000394947 C3orf56Q8N813 242 aa10.09□□□□□ -0.79
SIN3A-202ENST00000394947 XCL2Q9UBD3 114 aa10.09□□□□□ -0.79
SIN3A-202ENST00000394947 SYNJ2BPP57105 145 aa10.09□□□□□ -0.79
SIN3A-202ENST00000394947 RUSC1-AS1Q66K80 236 aa10.09□□□□□ -0.79
SIN3A-202ENST00000394947 TMEM256Q8N2U0 113 aa10.09□□□□□ -0.79
SIN3A-202ENST00000394947 NKAPP1Q8N9T2 125 aa10.09□□□□□ -0.79
SIN3A-202ENST00000394947 NABP1Q96AH0 204 aa10.09□□□□□ -0.79
SIN3A-202ENST00000394947 RASL11AQ6T310 242 aa10.08□□□□□ -0.8
SIN3A-202ENST00000394947 PIP4P2Q8N4L2 257 aa10.08□□□□□ -0.8
SIN3A-202ENST00000394947 IGHV4-28A0A0C4DH34 117 aa10.08□□□□□ -0.8
SIN3A-202ENST00000394947 PINLYPA6NC86 204 aa10.08□□□□□ -0.8
SIN3A-202ENST00000394947 MPV17L2Q567V2 206 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms