RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 LHFPL5Q8TAF8 219 aa15.01□□□□□ -0.01
TRAF4-203ENST00000394925 MARCH1Q8TCQ1 289 aa15.01□□□□□ -0.01
TRAF4-203ENST00000394925 TMEM222Q9H0R3 208 aa15.01□□□□□ -0.01
TRAF4-203ENST00000394925 CACNG5Q9UF02 275 aa15.01□□□□□ -0.01
TRAF4-203ENST00000394925 TEX48A0A1B0GUV7 120 aa15□□□□□ -0.01
TRAF4-203ENST00000394925 B3GALNT1O75752 331 aa15□□□□□ -0.01
TRAF4-203ENST00000394925 CDS2O95674 445 aa15□□□□□ -0.01
TRAF4-203ENST00000394925 OR5AC1P0C628 307 aa15□□□□□ -0.01
TRAF4-203ENST00000394925 OR4B1Q8NGF8 309 aa15□□□□□ -0.01
TRAF4-203ENST00000394925 GPR146Q96CH1 333 aa15□□□□□ -0.01
TRAF4-203ENST00000394925 WDR12Q9GZL7 423 aaKnown RBP15□□□□□ -0.01
TRAF4-203ENST00000394925 SAV1Q9H4B6 383 aaPredicted RBP15□□□□□ -0.01
TRAF4-203ENST00000394925 TBPP20226 339 aa14.99□□□□□ -0.01
TRAF4-203ENST00000394925 VBP1P61758 197 aa14.99□□□□□ -0.01
TRAF4-203ENST00000394925 ZNF709Q8N972 641 aa14.99□□□□□ -0.01
TRAF4-203ENST00000394925 GLYATL2Q8WU03 294 aa14.99□□□□□ -0.01
TRAF4-203ENST00000394925 RBPMSQ93062 196 aaKnown RBP14.99□□□□□ -0.01
TRAF4-203ENST00000394925 PBDC1Q9BVG4 233 aa14.99□□□□□ -0.01
TRAF4-203ENST00000394925 SLC35B3Q9H1N7 401 aa14.99□□□□□ -0.01
TRAF4-203ENST00000394925 VCX3AQ9NNX9 186 aa14.99□□□□□ -0.01
TRAF4-203ENST00000394925 MTFP1Q9UDX5 166 aa14.99□□□□□ -0.01
TRAF4-203ENST00000394925 TEX13DA0A0J9YY54 714 aaPredicted RBP14.98□□□□□ -0.01
TRAF4-203ENST00000394925 ID1P41134 155 aa14.98□□□□□ -0.01
TRAF4-203ENST00000394925 MEF2DQ14814 521 aa14.98□□□□□ -0.01
TRAF4-203ENST00000394925 TMEM88Q6PEY1 159 aa14.98□□□□□ -0.01
TRAF4-203ENST00000394925 FOXI2Q6ZQN5 318 aa14.98□□□□□ -0.01
TRAF4-203ENST00000394925 SELENOHQ8IZQ5 122 aaKnown RBP14.98□□□□□ -0.01
TRAF4-203ENST00000394925 GOLT1BQ9Y3E0 138 aa14.98□□□□□ -0.01
TRAF4-203ENST00000394925 TNFAIP8O95379 198 aa14.97□□□□□ -0.01
TRAF4-203ENST00000394925 GSG1LQ6UXU4 331 aa14.97□□□□□ -0.01
TRAF4-203ENST00000394925 COQ8AQ8NI60 647 aa14.97□□□□□ -0.01
TRAF4-203ENST00000394925 RNF125Q96EQ8 232 aa14.97□□□□□ -0.01
TRAF4-203ENST00000394925 C7orf50Q9BRJ6 194 aaKnown RBP14.97□□□□□ -0.01
TRAF4-203ENST00000394925 YTHDF2Q9Y5A9 579 aaKnown RBP14.97□□□□□ -0.01
TRAF4-203ENST00000394925 LOC102723971A0A1B0GUV8 181 aa14.96□□□□□ -0.01
TRAF4-203ENST00000394925 RAB3DO95716 219 aa14.96□□□□□ -0.01
TRAF4-203ENST00000394925 HBE1P02100 147 aa14.96□□□□□ -0.01
TRAF4-203ENST00000394925 NUP62P37198 522 aaPredicted RBP14.96□□□□□ -0.01
TRAF4-203ENST00000394925 OXA1LQ15070 435 aa14.96□□□□□ -0.01
TRAF4-203ENST00000394925 TMEM268Q5VZI3 342 aa14.96□□□□□ -0.01
TRAF4-203ENST00000394925 NOXA1Q86UR1 476 aa14.96□□□□□ -0.01
TRAF4-203ENST00000394925 C1orf158Q8N1D5 194 aa14.96□□□□□ -0.01
TRAF4-203ENST00000394925 TMEM229BQ8NBD8 167 aa14.96□□□□□ -0.01
TRAF4-203ENST00000394925 CLUHP3Q96NS8 147 aa14.96□□□□□ -0.01
TRAF4-203ENST00000394925 ABHD1Q96SE0 405 aa14.96□□□□□ -0.01
TRAF4-203ENST00000394925 RTBDNQ9BSG5 229 aaPredicted RBP14.96□□□□□ -0.01
TRAF4-203ENST00000394925 NAA60Q9H7X0 242 aa14.96□□□□□ -0.01
TRAF4-203ENST00000394925 PFDN2Q9UHV9 154 aa14.96□□□□□ -0.01
TRAF4-203ENST00000394925 C14orf166Q9Y224 244 aaKnown RBP14.96□□□□□ -0.01
TRAF4-203ENST00000394925 A0A087WXM4 84 aa14.95□□□□□ -0.02
TRAF4-203ENST00000394925 PSMB3P49720 205 aa14.95□□□□□ -0.02
TRAF4-203ENST00000394925 RORCP51449 518 aa14.95□□□□□ -0.02
TRAF4-203ENST00000394925 TAS2R19P59542 299 aa14.95□□□□□ -0.02
TRAF4-203ENST00000394925 DAD1P61803 113 aa14.95□□□□□ -0.02
TRAF4-203ENST00000394925 PSG9Q00887 426 aa14.95□□□□□ -0.02
TRAF4-203ENST00000394925 NMSQ5H8A3 153 aa14.95□□□□□ -0.02
TRAF4-203ENST00000394925 STEAP1BQ6NZ63 245 aa14.95□□□□□ -0.02
TRAF4-203ENST00000394925 MZT2AQ6P582 158 aa14.95□□□□□ -0.02
TRAF4-203ENST00000394925 FUNDC2Q9BWH2 189 aa14.95□□□□□ -0.02
TRAF4-203ENST00000394925 EXTL2Q9UBQ6 330 aa14.95□□□□□ -0.02
TRAF4-203ENST00000394925 TMED3Q9Y3Q3 217 aa14.95□□□□□ -0.02
TRAF4-203ENST00000394925 F6UB75 175 aa14.94□□□□□ -0.02
TRAF4-203ENST00000394925 SOCS3O14543 225 aa14.94□□□□□ -0.02
TRAF4-203ENST00000394925 KLF9Q13886 244 aaPredicted RBP14.94□□□□□ -0.02
TRAF4-203ENST00000394925 ZNF79Q15937 498 aa14.94□□□□□ -0.02
TRAF4-203ENST00000394925 RRN3P1Q2M238 152 aa14.94□□□□□ -0.02
TRAF4-203ENST00000394925 FAM78BQ5VT40 261 aa14.94□□□□□ -0.02
TRAF4-203ENST00000394925 OR8G2PQ6IF36 304 aa14.94□□□□□ -0.02
TRAF4-203ENST00000394925 FAAP20Q6NZ36 180 aa14.94□□□□□ -0.02
TRAF4-203ENST00000394925 C16orf90A8MZG2 172 aa14.93□□□□□ -0.02
TRAF4-203ENST00000394925 TNP2Q05952 138 aa14.93□□□□□ -0.02
TRAF4-203ENST00000394925 SPATA31B1PQ5VZV4 182 aa14.93□□□□□ -0.02
TRAF4-203ENST00000394925 EBLN2Q6P2I7 272 aa14.93□□□□□ -0.02
TRAF4-203ENST00000394925 LRP1BQ9NZR2 4599 aa14.92□□□□□ -0.02
TRAF4-203ENST00000394925 ZFP92A6NM28 416 aa14.92□□□□□ -0.02
TRAF4-203ENST00000394925 LYZP61626 148 aa14.92□□□□□ -0.02
TRAF4-203ENST00000394925 ZNF90Q03938 601 aa14.92□□□□□ -0.02
TRAF4-203ENST00000394925 ATG101Q9BSB4 218 aa14.92□□□□□ -0.02
TRAF4-203ENST00000394925 MAGT1Q9H0U3 335 aa14.92□□□□□ -0.02
TRAF4-203ENST00000394925 U3KQ87 197 aa14.92□□□□□ -0.02
TRAF4-203ENST00000394925 SULT1A3P0DMM9 295 aa14.91□□□□□ -0.02
TRAF4-203ENST00000394925 SULT1A4P0DMN0 295 aa14.91□□□□□ -0.02
TRAF4-203ENST00000394925 PAX9P55771 341 aa14.91□□□□□ -0.02
TRAF4-203ENST00000394925 SUPT4H1P63272 117 aaKnown RBP14.91□□□□□ -0.02
TRAF4-203ENST00000394925 C1orf194Q5T5A4 169 aa14.91□□□□□ -0.02
TRAF4-203ENST00000394925 GPR107Q5VW38 600 aa14.91□□□□□ -0.02
TRAF4-203ENST00000394925 LGI3Q8N145 548 aa14.91□□□□□ -0.02
TRAF4-203ENST00000394925 C15orf53Q8NAA6 179 aa14.91□□□□□ -0.02
TRAF4-203ENST00000394925 A0A0J9YX75 114 aa14.9□□□□□ -0.02
TRAF4-203ENST00000394925 CRYM-AS1A6NIL9 109 aa14.9□□□□□ -0.02
TRAF4-203ENST00000394925 ISLRO14498 428 aa14.9□□□□□ -0.02
TRAF4-203ENST00000394925 FAM3BP58499 235 aaPredicted RBP14.9□□□□□ -0.02
TRAF4-203ENST00000394925 MAPKAPK5-AS1Q8N8E1 139 aa14.9□□□□□ -0.02
TRAF4-203ENST00000394925 AP3S1Q92572 193 aa14.9□□□□□ -0.02
TRAF4-203ENST00000394925 PPP1R14BQ96C90 147 aa14.9□□□□□ -0.02
TRAF4-203ENST00000394925 TMEM208Q9BTX3 173 aa14.9□□□□□ -0.02
TRAF4-203ENST00000394925 PRR13Q9NZ81 148 aa14.9□□□□□ -0.02
TRAF4-203ENST00000394925 CACFD1Q9UGQ2 172 aa14.9□□□□□ -0.02
TRAF4-203ENST00000394925 TMEM56-RWDD3S4R434 201 aa14.9□□□□□ -0.02
TRAF4-203ENST00000394925 IGKV1D-37A0A075B6S9 117 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms