RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 FLVCR2Q9UPI3 526 aa6.43□□□□□ -1.38
ATG4A-205ENST00000394892 U3KQ87 197 aa6.43□□□□□ -1.38
ATG4A-205ENST00000394892 X6R8D5 127 aa6.43□□□□□ -1.38
ATG4A-205ENST00000394892 A0A1W2PS18 150 aa6.42□□□□□ -1.38
ATG4A-205ENST00000394892 FAM90A26D6RGX4 464 aa6.42□□□□□ -1.38
ATG4A-205ENST00000394892 NOL3O60936 208 aaKnown RBP6.42□□□□□ -1.38
ATG4A-205ENST00000394892 SFT2D2O95562 160 aa6.42□□□□□ -1.38
ATG4A-205ENST00000394892 HNRNPCP07910 306 aaKnown RBP eCLIP6.42□□□□□ -1.38
ATG4A-205ENST00000394892 RD3LP0DJH9 198 aa6.42□□□□□ -1.38
ATG4A-205ENST00000394892 PAFAH1B2P68402 229 aa6.42□□□□□ -1.38
ATG4A-205ENST00000394892 TOMM5Q8N4H5 51 aa6.42□□□□□ -1.38
ATG4A-205ENST00000394892 Q8WTZ3 238 aa6.42□□□□□ -1.38
ATG4A-205ENST00000394892 GATAD1Q8WUU5 269 aa6.42□□□□□ -1.38
ATG4A-205ENST00000394892 RAB40CQ96S21 281 aa6.42□□□□□ -1.38
ATG4A-205ENST00000394892 WDR12Q9GZL7 423 aaKnown RBP6.42□□□□□ -1.38
ATG4A-205ENST00000394892 MAGT1Q9H0U3 335 aa6.42□□□□□ -1.38
ATG4A-205ENST00000394892 ELOA3CA0A087WX78 387 aaPredicted RBP6.41□□□□□ -1.38
ATG4A-205ENST00000394892 SOCS3O14543 225 aa6.41□□□□□ -1.38
ATG4A-205ENST00000394892 ADAP1O75689 374 aa6.41□□□□□ -1.38
ATG4A-205ENST00000394892 SLC25A6P12236 298 aa6.41□□□□□ -1.38
ATG4A-205ENST00000394892 VAMP1P23763 118 aa6.41□□□□□ -1.38
ATG4A-205ENST00000394892 GPX4P36969 197 aaPredicted RBP6.41□□□□□ -1.38
ATG4A-205ENST00000394892 DHRS2Q13268 280 aa6.41□□□□□ -1.38
ATG4A-205ENST00000394892 PSMG4Q5JS54 123 aa6.41□□□□□ -1.38
ATG4A-205ENST00000394892 ACTL10Q5JWF8 245 aa6.41□□□□□ -1.38
ATG4A-205ENST00000394892 GDF5OSQ5U4N7 250 aa6.41□□□□□ -1.38
ATG4A-205ENST00000394892 GGNBP1Q5YKI7 109 aa6.41□□□□□ -1.38
ATG4A-205ENST00000394892 RPP25LQ8N5L8 163 aaKnown RBP6.41□□□□□ -1.38
ATG4A-205ENST00000394892 OR1S1Q8NH92 325 aa6.41□□□□□ -1.38
ATG4A-205ENST00000394892 PHLDA1Q8WV24 401 aaPredicted RBP6.41□□□□□ -1.38
ATG4A-205ENST00000394892 SLC25A21Q9BQT8 299 aaPredicted RBP6.41□□□□□ -1.38
ATG4A-205ENST00000394892 C11orf68Q9H3H3 251 aaKnown RBP6.41□□□□□ -1.38
ATG4A-205ENST00000394892 TMEM231Q9H6L2 316 aa6.41□□□□□ -1.38
ATG4A-205ENST00000394892 CLEC5AQ9NY25 188 aa6.41□□□□□ -1.38
ATG4A-205ENST00000394892 DNAH6Q9C0G6 4158 aa6.4□□□□□ -1.38
ATG4A-205ENST00000394892 IGHV4-28A0A0C4DH34 117 aa6.4□□□□□ -1.38
ATG4A-205ENST00000394892 DUXBA0A1W2PPF3 345 aa6.4□□□□□ -1.38
ATG4A-205ENST00000394892 C9orf170A2RU37 121 aa6.4□□□□□ -1.38
ATG4A-205ENST00000394892 CCDC160A6NGH7 325 aa6.4□□□□□ -1.38
ATG4A-205ENST00000394892 PMS2P5A8MQ11 134 aa6.4□□□□□ -1.38
ATG4A-205ENST00000394892 ZNF705EA8MWA4 302 aaPredicted RBP6.4□□□□□ -1.38
ATG4A-205ENST00000394892 H3BMM0 161 aa6.4□□□□□ -1.38
ATG4A-205ENST00000394892 ZNF701M0R085 212 aaPredicted RBP6.4□□□□□ -1.38
ATG4A-205ENST00000394892 CCNKO75909 580 aa6.4□□□□□ -1.38
ATG4A-205ENST00000394892 NDUFB6O95139 128 aa6.4□□□□□ -1.38
ATG4A-205ENST00000394892 IFNA4P05014 189 aa6.4□□□□□ -1.38
ATG4A-205ENST00000394892 HOXB5P09067 269 aa6.4□□□□□ -1.38
ATG4A-205ENST00000394892 GATA2P23769 480 aaPredicted RBP6.4□□□□□ -1.38
ATG4A-205ENST00000394892 PAX9P55771 341 aa6.4□□□□□ -1.38
ATG4A-205ENST00000394892 AP3S2P59780 193 aa6.4□□□□□ -1.38
ATG4A-205ENST00000394892 SRPXP78539 464 aa6.4□□□□□ -1.38
ATG4A-205ENST00000394892 PRR20EP86478 221 aa6.4□□□□□ -1.38
ATG4A-205ENST00000394892 PRR20CP86479 221 aa6.4□□□□□ -1.38
ATG4A-205ENST00000394892 PRR20DP86480 221 aa6.4□□□□□ -1.38
ATG4A-205ENST00000394892 PRR20BP86481 221 aa6.4□□□□□ -1.38
ATG4A-205ENST00000394892 PRR20AP86496 221 aa6.4□□□□□ -1.38
ATG4A-205ENST00000394892 OR2F1Q13607 317 aa6.4□□□□□ -1.38
ATG4A-205ENST00000394892 LGALS9CQ6DKI2 356 aa6.4□□□□□ -1.38
ATG4A-205ENST00000394892 ETFRF1Q6IPR1 90 aa6.4□□□□□ -1.38
ATG4A-205ENST00000394892 STHQ8IWL8 128 aa6.4□□□□□ -1.38
ATG4A-205ENST00000394892 THAP8Q8NA92 274 aa6.4□□□□□ -1.38
ATG4A-205ENST00000394892 RNF125Q96EQ8 232 aa6.4□□□□□ -1.38
ATG4A-205ENST00000394892 LINC00854A0A1B0GVQ3 168 aa6.39□□□□□ -1.39
ATG4A-205ENST00000394892 HELTA6NFD8 242 aa6.39□□□□□ -1.39
ATG4A-205ENST00000394892 WRBO00258 174 aa6.39□□□□□ -1.39
ATG4A-205ENST00000394892 PLA2G10O15496 165 aa6.39□□□□□ -1.39
ATG4A-205ENST00000394892 SYNGR2O43760 224 aa6.39□□□□□ -1.39
ATG4A-205ENST00000394892 DEDDO75618 318 aa6.39□□□□□ -1.39
ATG4A-205ENST00000394892 ANXA3P12429 323 aa6.39□□□□□ -1.39
ATG4A-205ENST00000394892 ANXA7P20073 488 aaKnown RBP6.39□□□□□ -1.39
ATG4A-205ENST00000394892 FAUP35544 74 aaKnown RBP6.39□□□□□ -1.39
ATG4A-205ENST00000394892 EIF2B2P49770 351 aaKnown RBP6.39□□□□□ -1.39
ATG4A-205ENST00000394892 ATP5IP56385 69 aaPredicted RBP6.39□□□□□ -1.39
ATG4A-205ENST00000394892 ID3Q02535 119 aa6.39□□□□□ -1.39
ATG4A-205ENST00000394892 SIGLEC15Q6ZMC9 328 aa6.39□□□□□ -1.39
ATG4A-205ENST00000394892 NOXA1Q86UR1 476 aa6.39□□□□□ -1.39
ATG4A-205ENST00000394892 CENPSQ8N2Z9 138 aa6.39□□□□□ -1.39
ATG4A-205ENST00000394892 DEDD2Q8WXF8 326 aa6.39□□□□□ -1.39
ATG4A-205ENST00000394892 C20orf173Q96LM9 149 aa6.39□□□□□ -1.39
ATG4A-205ENST00000394892 TRGV9Q99603 122 aa6.39□□□□□ -1.39
ATG4A-205ENST00000394892 PBDC1Q9BVG4 233 aa6.39□□□□□ -1.39
ATG4A-205ENST00000394892 SCRT1Q9BWW7 348 aa6.39□□□□□ -1.39
ATG4A-205ENST00000394892 NRN1Q9NPD7 142 aa6.39□□□□□ -1.39
ATG4A-205ENST00000394892 CELA1Q9UNI1 258 aa6.39□□□□□ -1.39
ATG4A-205ENST00000394892 TMED3Q9Y3Q3 217 aa6.39□□□□□ -1.39
ATG4A-205ENST00000394892 DNAH2Q9P225 4427 aa6.39□□□□□ -1.39
ATG4A-205ENST00000394892 AGRNO00468 2067 aa6.38□□□□□ -1.39
ATG4A-205ENST00000394892 ZFP92A6NM28 416 aa6.38□□□□□ -1.39
ATG4A-205ENST00000394892 H3BP45 60 aa6.38□□□□□ -1.39
ATG4A-205ENST00000394892 S100A5P33763 92 aa6.38□□□□□ -1.39
ATG4A-205ENST00000394892 LYZP61626 148 aa6.38□□□□□ -1.39
ATG4A-205ENST00000394892 POLR2GP62487 172 aaKnown RBP eCLIP6.38□□□□□ -1.39
ATG4A-205ENST00000394892 OR8G2PQ6IF36 304 aa6.38□□□□□ -1.39
ATG4A-205ENST00000394892 OR4D5Q8NGN0 318 aa6.38□□□□□ -1.39
ATG4A-205ENST00000394892 C11orf45Q8TAV5 145 aa6.38□□□□□ -1.39
ATG4A-205ENST00000394892 SLC35E1Q96K37 410 aa6.38□□□□□ -1.39
ATG4A-205ENST00000394892 MFFQ9GZY8 342 aa6.38□□□□□ -1.39
ATG4A-205ENST00000394892 SEPSECSQ9HD40 501 aaKnown RBP6.38□□□□□ -1.39
ATG4A-205ENST00000394892 FBXL17Q9UF56 701 aa6.38□□□□□ -1.39
ATG4A-205ENST00000394892 CACFD1Q9UGQ2 172 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms