RNA–Protein interactions for RNA: ENST00000394830.7

PBRM1-204, Transcript of polybromo 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PBRM1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-204ENST00000394830 LINC00311Q8N616 119 aa11.29□□□□□ -0.6
PBRM1-204ENST00000394830 CBY1Q9Y3M2 126 aa11.29□□□□□ -0.6
PBRM1-204ENST00000394830 SPTBN1Q01082 2364 aaKnown RBP11.29□□□□□ -0.6
PBRM1-204ENST00000394830 C5orf42Q9H799 3197 aa11.29□□□□□ -0.6
PBRM1-204ENST00000394830 A0A1B0GUT8 65 aa11.29□□□□□ -0.6
PBRM1-204ENST00000394830 PROP1O75360 226 aa11.29□□□□□ -0.6
PBRM1-204ENST00000394830 PSG9Q00887 426 aa11.29□□□□□ -0.6
PBRM1-204ENST00000394830 C11orf42Q8N5U0 333 aa11.29□□□□□ -0.6
PBRM1-204ENST00000394830 LYNX1G3V0Z9 82 aa11.29□□□□□ -0.6
PBRM1-204ENST00000394830 LYNX1P0DP58 116 aa11.29□□□□□ -0.6
PBRM1-204ENST00000394830 SSBP4Q9BWG4 385 aaPredicted RBP11.29□□□□□ -0.6
PBRM1-204ENST00000394830 A0A1W2PPI3 338 aa11.29□□□□□ -0.6
PBRM1-204ENST00000394830 GPX1P07203 203 aa11.29□□□□□ -0.6
PBRM1-204ENST00000394830 PVRIGQ6DKI7 326 aa11.29□□□□□ -0.6
PBRM1-204ENST00000394830 OR4C5Q8NGB2 326 aa11.29□□□□□ -0.6
PBRM1-204ENST00000394830 WNK2Q9Y3S1 2297 aa11.28□□□□□ -0.6
PBRM1-204ENST00000394830 FAM87AP0C7U9 286 aa11.28□□□□□ -0.6
PBRM1-204ENST00000394830 CD33P20138 364 aa11.28□□□□□ -0.6
PBRM1-204ENST00000394830 HINT1P49773 126 aaPredicted RBP11.28□□□□□ -0.6
PBRM1-204ENST00000394830 PRB3Q04118 309 aaPredicted RBP11.28□□□□□ -0.6
PBRM1-204ENST00000394830 TMEM155Q4W5P6 130 aa11.28□□□□□ -0.6
PBRM1-204ENST00000394830 IGHV1-3A0A0C4DH29 117 aa11.28□□□□□ -0.6
PBRM1-204ENST00000394830 NBR2O15453 112 aa11.28□□□□□ -0.6
PBRM1-204ENST00000394830 PDLIM4P50479 330 aa11.28□□□□□ -0.6
PBRM1-204ENST00000394830 HLA-DRB1P01911 266 aa11.28□□□□□ -0.6
PBRM1-204ENST00000394830 FAM106CPP0CH98 169 aa11.28□□□□□ -0.6
PBRM1-204ENST00000394830 ECSCRQ19T08 205 aa11.28□□□□□ -0.6
PBRM1-204ENST00000394830 RNF5Q99942 180 aa11.28□□□□□ -0.6
PBRM1-204ENST00000394830 SIGLEC9Q9Y336 463 aa11.28□□□□□ -0.6
PBRM1-204ENST00000394830 BMPR1BO00238 502 aa11.28□□□□□ -0.6
PBRM1-204ENST00000394830 CLEC3BP05452 202 aa11.28□□□□□ -0.6
PBRM1-204ENST00000394830 MSMPQ1L6U9 139 aa11.28□□□□□ -0.6
PBRM1-204ENST00000394830 SEM1Q6ZVN7 128 aa11.28□□□□□ -0.6
PBRM1-204ENST00000394830 ZNF329Q86UD4 541 aa11.28□□□□□ -0.6
PBRM1-204ENST00000394830 TMEM190Q8WZ59 177 aa11.28□□□□□ -0.6
PBRM1-204ENST00000394830 LINC00479Q96M42 142 aa11.28□□□□□ -0.6
PBRM1-204ENST00000394830 F11RQ9Y624 299 aaKnown RBP11.27□□□□□ -0.6
PBRM1-204ENST00000394830 LAMA2P24043 3122 aaKnown RBP11.27□□□□□ -0.6
PBRM1-204ENST00000394830 ABCA4P78363 2273 aa11.27□□□□□ -0.61
PBRM1-204ENST00000394830 RPS20P60866 119 aaKnown RBP11.27□□□□□ -0.61
PBRM1-204ENST00000394830 IGF2-ASQ6U949 168 aa11.27□□□□□ -0.61
PBRM1-204ENST00000394830 TNRC6AQ8NDV7 1962 aaKnown RBP11.27□□□□□ -0.61
PBRM1-204ENST00000394830 SAPCD1Q5SSQ6 148 aa11.27□□□□□ -0.61
PBRM1-204ENST00000394830 NUP35Q8NFH5 326 aa11.27□□□□□ -0.61
PBRM1-204ENST00000394830 AP5S1Q9NUS5 200 aa11.27□□□□□ -0.61
PBRM1-204ENST00000394830 MRPL27Q9P0M9 148 aaKnown RBP11.27□□□□□ -0.61
PBRM1-204ENST00000394830 RABAC1Q9UI14 185 aa11.27□□□□□ -0.61
PBRM1-204ENST00000394830 POLR3KQ9Y2Y1 108 aaPredicted RBP11.27□□□□□ -0.61
PBRM1-204ENST00000394830 PSG1P11464 419 aa11.27□□□□□ -0.61
PBRM1-204ENST00000394830 WT1-ASQ06250 92 aa11.27□□□□□ -0.61
PBRM1-204ENST00000394830 ZNF738Q8NE65 137 aa11.27□□□□□ -0.61
PBRM1-204ENST00000394830 TCRAP04437 139 aa11.26□□□□□ -0.61
PBRM1-204ENST00000394830 Q6AWC8 147 aa11.26□□□□□ -0.61
PBRM1-204ENST00000394830 OR8A1Q8NGG7 326 aa11.26□□□□□ -0.61
PBRM1-204ENST00000394830 A0A1B0GW15 77 aa11.26□□□□□ -0.61
PBRM1-204ENST00000394830 K7EN84 100 aa11.26□□□□□ -0.61
PBRM1-204ENST00000394830 TIMM23O14925 209 aa11.26□□□□□ -0.61
PBRM1-204ENST00000394830 NUTF2P61970 127 aaKnown RBP11.26□□□□□ -0.61
PBRM1-204ENST00000394830 OR10AG1Q8NH19 301 aa11.26□□□□□ -0.61
PBRM1-204ENST00000394830 NEU4Q8WWR8 484 aaPredicted RBP11.26□□□□□ -0.61
PBRM1-204ENST00000394830 RNF125Q96EQ8 232 aa11.26□□□□□ -0.61
PBRM1-204ENST00000394830 C21orf62Q9NYP8 219 aa11.26□□□□□ -0.61
PBRM1-204ENST00000394830 ZFP30Q9Y2G7 519 aa11.26□□□□□ -0.61
PBRM1-204ENST00000394830 ZGRF1Q86YA3 2104 aa11.26□□□□□ -0.61
PBRM1-204ENST00000394830 SLC25A34Q6PIV7 304 aa11.26□□□□□ -0.61
PBRM1-204ENST00000394830 TMEM136Q6ZRR5 245 aa11.26□□□□□ -0.61
PBRM1-204ENST00000394830 SPACA3Q8IXA5 215 aa11.26□□□□□ -0.61
PBRM1-204ENST00000394830 TRBV20OR9-2A0A075B6H5 130 aa11.26□□□□□ -0.61
PBRM1-204ENST00000394830 LOXP28300 417 aaPredicted RBP11.26□□□□□ -0.61
PBRM1-204ENST00000394830 CIARTQ8N365 385 aaPredicted RBP11.26□□□□□ -0.61
PBRM1-204ENST00000394830 SLC25A2Q9BXI2 301 aa11.26□□□□□ -0.61
PBRM1-204ENST00000394830 E7EQL1 145 aa11.25□□□□□ -0.61
PBRM1-204ENST00000394830 SMIM12Q96EX1 92 aa11.25□□□□□ -0.61
PBRM1-204ENST00000394830 MALRD1Q5VYJ5 2156 aa11.25□□□□□ -0.61
PBRM1-204ENST00000394830 S100A4P26447 101 aaKnown RBP11.25□□□□□ -0.61
PBRM1-204ENST00000394830 UNQ5815/PRO19632Q6UWF5 114 aa11.25□□□□□ -0.61
PBRM1-204ENST00000394830 UBTD1Q9HAC8 227 aa11.25□□□□□ -0.61
PBRM1-204ENST00000394830 BUB1B-PAK6H3BSN5 160 aa11.25□□□□□ -0.61
PBRM1-204ENST00000394830 CGB3P0DN86 165 aa11.25□□□□□ -0.61
PBRM1-204ENST00000394830 CGB7P0DN87 165 aa11.25□□□□□ -0.61
PBRM1-204ENST00000394830 RAB9AP51151 201 aa11.25□□□□□ -0.61
PBRM1-204ENST00000394830 ZNF672Q499Z4 452 aaPredicted RBP11.25□□□□□ -0.61
PBRM1-204ENST00000394830 FAM231DQ6ZW35 169 aa11.25□□□□□ -0.61
PBRM1-204ENST00000394830 C20orf144Q9BQM9 153 aa11.25□□□□□ -0.61
PBRM1-204ENST00000394830 ARHGAP21Q5T5U3 1957 aa11.25□□□□□ -0.61
PBRM1-204ENST00000394830 LOC389332A0A1B0GUA5 103 aa11.25□□□□□ -0.61
PBRM1-204ENST00000394830 OR4C46A6NHA9 309 aa11.25□□□□□ -0.61
PBRM1-204ENST00000394830 ARPC1AQ92747 370 aa11.25□□□□□ -0.61
PBRM1-204ENST00000394830 SLC25A39Q9BZJ4 359 aaPredicted RBP11.25□□□□□ -0.61
PBRM1-204ENST00000394830 A0A1B0GWJ7 208 aa11.24□□□□□ -0.61
PBRM1-204ENST00000394830 SIAH2O43255 324 aa11.24□□□□□ -0.61
PBRM1-204ENST00000394830 C12orf54Q6X4T0 127 aa11.24□□□□□ -0.61
PBRM1-204ENST00000394830 S4R3C0 116 aa11.24□□□□□ -0.61
PBRM1-204ENST00000394830 CKS2P33552 79 aa11.24□□□□□ -0.61
PBRM1-204ENST00000394830 RELQ04864 619 aaPredicted RBP11.24□□□□□ -0.61
PBRM1-204ENST00000394830 CYB5R2Q6BCY4 276 aa11.24□□□□□ -0.61
PBRM1-204ENST00000394830 MRPL52Q86TS9 123 aaKnown RBP11.24□□□□□ -0.61
PBRM1-204ENST00000394830 PIEZO1Q92508 2521 aa11.24□□□□□ -0.61
PBRM1-204ENST00000394830 KLRB1Q12918 225 aa11.24□□□□□ -0.61
PBRM1-204ENST00000394830 TRAV9-2A0A087WT02 112 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms