RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 PRB4P10163 310 aaPredicted RBP11.91□□□□□ -0.5
GPC3-202ENST00000394299 TMEM11P17152 192 aa11.91□□□□□ -0.5
GPC3-202ENST00000394299 SAA4P35542 130 aa11.91□□□□□ -0.5
GPC3-202ENST00000394299 CENPWQ5EE01 88 aa11.91□□□□□ -0.5
GPC3-202ENST00000394299 TEX38Q6PEX7 206 aa11.91□□□□□ -0.5
GPC3-202ENST00000394299 Q8N6K4 173 aa11.91□□□□□ -0.5
GPC3-202ENST00000394299 NHLRC2Q8NBF2 726 aa11.91□□□□□ -0.5
GPC3-202ENST00000394299 TRAV34A0A0B4J273 112 aa11.9□□□□□ -0.5
GPC3-202ENST00000394299 IGHV4-61A0A0C4DH41 118 aa11.9□□□□□ -0.5
GPC3-202ENST00000394299 MDFIC2A0A1B0GVS7 189 aa11.9□□□□□ -0.5
GPC3-202ENST00000394299 A0A1W2PRE2 83 aa11.9□□□□□ -0.5
GPC3-202ENST00000394299 IGKV1-17P01599 117 aa11.9□□□□□ -0.5
GPC3-202ENST00000394299 LYZP61626 148 aa11.9□□□□□ -0.5
GPC3-202ENST00000394299 PDZD11Q5EBL8 140 aa11.9□□□□□ -0.5
GPC3-202ENST00000394299 SGMS2Q8NHU3 365 aa11.9□□□□□ -0.5
GPC3-202ENST00000394299 SGK494Q96LW2 274 aa11.9□□□□□ -0.5
GPC3-202ENST00000394299 RNF2Q99496 336 aa11.9□□□□□ -0.5
GPC3-202ENST00000394299 IFITM10A6NMD0 228 aa11.9□□□□□ -0.51
GPC3-202ENST00000394299 HYPMO75409 117 aa11.9□□□□□ -0.51
GPC3-202ENST00000394299 IGHV3-23P01764 117 aa11.9□□□□□ -0.51
GPC3-202ENST00000394299 GNG5P63218 68 aa11.9□□□□□ -0.51
GPC3-202ENST00000394299 MINOS1Q5TGZ0 78 aa11.9□□□□□ -0.51
GPC3-202ENST00000394299 CCDC144NLQ6NUI1 221 aa11.9□□□□□ -0.51
GPC3-202ENST00000394299 BCL6BQ8N143 479 aaPredicted RBP11.9□□□□□ -0.51
GPC3-202ENST00000394299 CCL19Q99731 98 aa11.9□□□□□ -0.51
GPC3-202ENST00000394299 MINOS1-NBL1R4GNA1 71 aa11.9□□□□□ -0.51
GPC3-202ENST00000394299 ELOA3CA0A087WX78 387 aaPredicted RBP11.89□□□□□ -0.51
GPC3-202ENST00000394299 UBE2E1P51965 193 aa11.89□□□□□ -0.51
GPC3-202ENST00000394299 ZNF562Q6V9R5 426 aa11.89□□□□□ -0.51
GPC3-202ENST00000394299 OR10G8Q8NGN5 311 aa11.89□□□□□ -0.51
GPC3-202ENST00000394299 RBM14Q96PK6 669 aaKnown RBP11.89□□□□□ -0.51
GPC3-202ENST00000394299 FANCD2OSQ96PS1 177 aa11.89□□□□□ -0.51
GPC3-202ENST00000394299 SRD5A3Q9H8P0 318 aa11.89□□□□□ -0.51
GPC3-202ENST00000394299 CENPEQ02224 2701 aa11.89□□□□□ -0.51
GPC3-202ENST00000394299 GGCTO75223 188 aaKnown RBP11.89□□□□□ -0.51
GPC3-202ENST00000394299 GNG4P50150 75 aa11.89□□□□□ -0.51
GPC3-202ENST00000394299 PDLIM4P50479 330 aa11.89□□□□□ -0.51
GPC3-202ENST00000394299 ARPC1AQ92747 370 aa11.89□□□□□ -0.51
GPC3-202ENST00000394299 PERPQ96FX8 193 aa11.89□□□□□ -0.51
GPC3-202ENST00000394299 RNASE7Q9H1E1 156 aaKnown RBP11.89□□□□□ -0.51
GPC3-202ENST00000394299 FAM208BQ5VWN6 2430 aa11.88□□□□□ -0.51
GPC3-202ENST00000394299 PPP5D1E7EU14 171 aa11.88□□□□□ -0.51
GPC3-202ENST00000394299 EGR2P11161 476 aaPredicted RBP11.88□□□□□ -0.51
GPC3-202ENST00000394299 HOXA5P20719 270 aa11.88□□□□□ -0.51
GPC3-202ENST00000394299 ZNF329Q86UD4 541 aa11.88□□□□□ -0.51
GPC3-202ENST00000394299 Q8N9W7 124 aa11.88□□□□□ -0.51
GPC3-202ENST00000394299 RASL11BQ9BPW5 248 aa11.88□□□□□ -0.51
GPC3-202ENST00000394299 HSPB9Q9BQS6 159 aa11.88□□□□□ -0.51
GPC3-202ENST00000394299 SOX21Q9Y651 276 aaPredicted RBP11.88□□□□□ -0.51
GPC3-202ENST00000394299 CENPVL3A0A0U1RRI6 287 aa11.87□□□□□ -0.51
GPC3-202ENST00000394299 ZNF320A2RRD8 509 aa11.87□□□□□ -0.51
GPC3-202ENST00000394299 IGLV2-8P01709 118 aa11.87□□□□□ -0.51
GPC3-202ENST00000394299 FRMD6-AS1P0C7T7 363 aa11.87□□□□□ -0.51
GPC3-202ENST00000394299 SRP14P37108 136 aaKnown RBP11.87□□□□□ -0.51
GPC3-202ENST00000394299 EBI3Q14213 229 aa11.87□□□□□ -0.51
GPC3-202ENST00000394299 FAM168AQ92567 244 aa11.87□□□□□ -0.51
GPC3-202ENST00000394299 NIT2Q9NQR4 276 aa11.87□□□□□ -0.51
GPC3-202ENST00000394299 ARL2-SNX15V9GYD0 113 aa11.87□□□□□ -0.51
GPC3-202ENST00000394299 IGHV7-81A0A0B4J1V7 117 aa11.87□□□□□ -0.51
GPC3-202ENST00000394299 LINC01548A6NM66 108 aa11.87□□□□□ -0.51
GPC3-202ENST00000394299 C9JCJ5 164 aa11.87□□□□□ -0.51
GPC3-202ENST00000394299 CD99P14209 185 aa11.87□□□□□ -0.51
GPC3-202ENST00000394299 ERVFC1-1P60608 527 aa11.87□□□□□ -0.51
GPC3-202ENST00000394299 RPH3ALQ9UNE2 315 aa11.87□□□□□ -0.51
GPC3-202ENST00000394299 FBN2P35556 2912 aa11.87□□□□□ -0.51
GPC3-202ENST00000394299 EPG5Q9HCE0 2579 aa11.87□□□□□ -0.51
GPC3-202ENST00000394299 RD3LP0DJH9 198 aa11.86□□□□□ -0.51
GPC3-202ENST00000394299 BRD3OSQ6XYD6 125 aa11.86□□□□□ -0.51
GPC3-202ENST00000394299 IGHV4-30-2A0A087WSY4 118 aa11.86□□□□□ -0.51
GPC3-202ENST00000394299 PGPA6NDG6 321 aa11.86□□□□□ -0.51
GPC3-202ENST00000394299 OOSP1A8MZH6 123 aa11.86□□□□□ -0.51
GPC3-202ENST00000394299 NBEAP1P0C6P0 100 aa11.86□□□□□ -0.51
GPC3-202ENST00000394299 SMIM6P0DI80 62 aa11.86□□□□□ -0.51
GPC3-202ENST00000394299 MGST1P10620 155 aaKnown RBP11.86□□□□□ -0.51
GPC3-202ENST00000394299 ATP5J2P56134 94 aa11.86□□□□□ -0.51
GPC3-202ENST00000394299 KCNIP4Q6PIL6 250 aa11.86□□□□□ -0.51
GPC3-202ENST00000394299 SRSF8Q9BRL6 282 aaKnown RBP11.86□□□□□ -0.51
GPC3-202ENST00000394299 GPR61Q9BZJ8 451 aa11.86□□□□□ -0.51
GPC3-202ENST00000394299 HIGD1AQ9Y241 93 aa11.86□□□□□ -0.51
GPC3-202ENST00000394299 POLQO75417 2590 aa11.86□□□□□ -0.51
GPC3-202ENST00000394299 NPFFO15130 113 aa11.85□□□□□ -0.51
GPC3-202ENST00000394299 OR2J3O76001 311 aa11.85□□□□□ -0.51
GPC3-202ENST00000394299 NDUFB8O95169 186 aa11.85□□□□□ -0.51
GPC3-202ENST00000394299 FAM106CPP0CH98 169 aa11.85□□□□□ -0.51
GPC3-202ENST00000394299 GP9P14770 177 aa11.85□□□□□ -0.51
GPC3-202ENST00000394299 IGF2BP2-AS1Q96M15 143 aa11.85□□□□□ -0.51
GPC3-202ENST00000394299 SLC25A39Q9BZJ4 359 aaPredicted RBP11.85□□□□□ -0.51
GPC3-202ENST00000394299 IGLV11-55A0A075B6I3 123 aa11.85□□□□□ -0.51
GPC3-202ENST00000394299 PPP1R2P9O14990 202 aa11.85□□□□□ -0.51
GPC3-202ENST00000394299 PLP1P60201 277 aa11.85□□□□□ -0.51
GPC3-202ENST00000394299 C10orf105Q8TEF2 133 aa11.85□□□□□ -0.51
GPC3-202ENST00000394299 TBL2Q9Y4P3 447 aaKnown RBP11.85□□□□□ -0.51
GPC3-202ENST00000394299 V9GYV3 84 aa11.85□□□□□ -0.51
GPC3-202ENST00000394299 F8W735 103 aaPredicted RBP11.84□□□□□ -0.51
GPC3-202ENST00000394299 ISLRO14498 428 aa11.84□□□□□ -0.51
GPC3-202ENST00000394299 SPINK4O60575 86 aa11.84□□□□□ -0.51
GPC3-202ENST00000394299 MYCNOSP40205 109 aa11.84□□□□□ -0.51
GPC3-202ENST00000394299 FOXL1Q12952 345 aa11.84□□□□□ -0.51
GPC3-202ENST00000394299 TMEM219Q86XT9 240 aa11.84□□□□□ -0.51
GPC3-202ENST00000394299 C17orf77Q96MU5 243 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms