RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 SRP14P37108 136 aaKnown RBP6.77□□□□□ -1.33
TDP1-203ENST00000393454 MEF2BQ02080 365 aaPredicted RBP6.77□□□□□ -1.33
TDP1-203ENST00000393454 KIAA0141Q14154 515 aaPredicted RBP6.77□□□□□ -1.33
TDP1-203ENST00000393454 C15orf32Q32M92 178 aa6.77□□□□□ -1.33
TDP1-203ENST00000393454 ATRAIDQ6UW56 229 aa6.77□□□□□ -1.33
TDP1-203ENST00000393454 Q6YL49 198 aa6.77□□□□□ -1.33
TDP1-203ENST00000393454 LINC00305Q7Z4B0 112 aa6.77□□□□□ -1.33
TDP1-203ENST00000393454 ZNF48Q96MX3 618 aaPredicted RBP6.77□□□□□ -1.33
TDP1-203ENST00000393454 NOL4LQ96MY1 436 aaPredicted RBP6.77□□□□□ -1.33
TDP1-203ENST00000393454 C11orf94C9JXX5 98 aa6.76□□□□□ -1.33
TDP1-203ENST00000393454 HOXA3O43365 443 aaPredicted RBP6.76□□□□□ -1.33
TDP1-203ENST00000393454 SCGB2A1O75556 95 aa6.76□□□□□ -1.33
TDP1-203ENST00000393454 SNAPINO95295 136 aa6.76□□□□□ -1.33
TDP1-203ENST00000393454 IGKV1-17P01599 117 aa6.76□□□□□ -1.33
TDP1-203ENST00000393454 OR10J4P0C629 311 aa6.76□□□□□ -1.33
TDP1-203ENST00000393454 PQLC2Q6ZP29 291 aa6.76□□□□□ -1.33
TDP1-203ENST00000393454 Q6ZS46 218 aa6.76□□□□□ -1.33
TDP1-203ENST00000393454 TEX29Q8N6K0 151 aa6.76□□□□□ -1.33
TDP1-203ENST00000393454 NECAP1Q8NC96 275 aa6.76□□□□□ -1.33
TDP1-203ENST00000393454 OR5AU1Q8NGC0 362 aa6.76□□□□□ -1.33
TDP1-203ENST00000393454 VN1R17PQ8TDU5 208 aa6.76□□□□□ -1.33
TDP1-203ENST00000393454 NKX6-2Q9C056 277 aaPredicted RBP6.76□□□□□ -1.33
TDP1-203ENST00000393454 YAE1D1Q9NRH1 226 aa6.76□□□□□ -1.33
TDP1-203ENST00000393454 HIGD1AQ9Y241 93 aa6.76□□□□□ -1.33
TDP1-203ENST00000393454 PUS1Q9Y606 427 aaKnown RBP eCLIP6.76□□□□□ -1.33
TDP1-203ENST00000393454 ZFHX3Q15911 3703 aa6.76□□□□□ -1.33
TDP1-203ENST00000393454 M0R036 132 aa6.75□□□□□ -1.33
TDP1-203ENST00000393454 AP4M1O00189 453 aa6.75□□□□□ -1.33
TDP1-203ENST00000393454 TOMM40O96008 361 aa6.75□□□□□ -1.33
TDP1-203ENST00000393454 IGF1P05019 195 aa6.75□□□□□ -1.33
TDP1-203ENST00000393454 CD81P60033 236 aa6.75□□□□□ -1.33
TDP1-203ENST00000393454 ATP5G2Q06055 141 aa6.75□□□□□ -1.33
TDP1-203ENST00000393454 MORN5Q5VZ52 161 aa6.75□□□□□ -1.33
TDP1-203ENST00000393454 OR51G1Q8NGK1 321 aa6.75□□□□□ -1.33
TDP1-203ENST00000393454 SLC25A2Q9BXI2 301 aa6.75□□□□□ -1.33
TDP1-203ENST00000393454 GNB4Q9HAV0 340 aa6.75□□□□□ -1.33
TDP1-203ENST00000393454 TMEM167BQ9NRX6 74 aa6.75□□□□□ -1.33
TDP1-203ENST00000393454 VPREB3Q9UKI3 123 aa6.75□□□□□ -1.33
TDP1-203ENST00000393454 TRBV9A0A0B4J1U6 114 aa6.75□□□□□ -1.33
TDP1-203ENST00000393454 TRGV3P03979 118 aa6.75□□□□□ -1.33
TDP1-203ENST00000393454 IL4P05112 153 aa6.75□□□□□ -1.33
TDP1-203ENST00000393454 GPR183P32249 361 aa6.75□□□□□ -1.33
TDP1-203ENST00000393454 ATP5G3P48201 142 aa6.75□□□□□ -1.33
TDP1-203ENST00000393454 CRIP2P52943 208 aaPredicted RBP6.75□□□□□ -1.33
TDP1-203ENST00000393454 UBE2L3P68036 154 aaKnown RBP6.75□□□□□ -1.33
TDP1-203ENST00000393454 ZNF674Q2M3X9 581 aa6.75□□□□□ -1.33
TDP1-203ENST00000393454 SIGLECL1Q8N7X8 197 aa6.75□□□□□ -1.33
TDP1-203ENST00000393454 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.75□□□□□ -1.33
TDP1-203ENST00000393454 Q8WTZ3 238 aa6.75□□□□□ -1.33
TDP1-203ENST00000393454 EEF1AKMT3Q96AZ1 226 aa6.75□□□□□ -1.33
TDP1-203ENST00000393454 TXN2Q99757 166 aa6.75□□□□□ -1.33
TDP1-203ENST00000393454 PAXXQ9BUH6 204 aa6.75□□□□□ -1.33
TDP1-203ENST00000393454 C20orf24Q9BUV8 137 aa6.75□□□□□ -1.33
TDP1-203ENST00000393454 MXRA5Q9NR99 2828 aa6.74□□□□□ -1.33
TDP1-203ENST00000393454 F8W735 103 aaPredicted RBP6.74□□□□□ -1.33
TDP1-203ENST00000393454 NUPL2O15504 423 aaKnown RBP6.74□□□□□ -1.33
TDP1-203ENST00000393454 CD5LO43866 347 aa6.74□□□□□ -1.33
TDP1-203ENST00000393454 CLEC3BP05452 202 aa6.74□□□□□ -1.33
TDP1-203ENST00000393454 PYYP10082 97 aa6.74□□□□□ -1.33
TDP1-203ENST00000393454 PF4V1P10720 104 aa6.74□□□□□ -1.33
TDP1-203ENST00000393454 TPPP2P59282 170 aa6.74□□□□□ -1.33
TDP1-203ENST00000393454 PLP1P60201 277 aa6.74□□□□□ -1.33
TDP1-203ENST00000393454 YPEL3P61236 119 aaPredicted RBP6.74□□□□□ -1.33
TDP1-203ENST00000393454 BTN1A1Q13410 526 aa6.74□□□□□ -1.33
TDP1-203ENST00000393454 CLEC19AQ6UXS0 136 aa6.74□□□□□ -1.33
TDP1-203ENST00000393454 CLRN3Q8NCR9 226 aa6.74□□□□□ -1.33
TDP1-203ENST00000393454 ZNF502Q8TBZ5 544 aa6.74□□□□□ -1.33
TDP1-203ENST00000393454 RPUSD4Q96CM3 377 aaKnown RBP6.74□□□□□ -1.33
TDP1-203ENST00000393454 ZNF503Q96F45 646 aa6.74□□□□□ -1.33
TDP1-203ENST00000393454 FAM167A-AS1Q96KT0 104 aa6.74□□□□□ -1.33
TDP1-203ENST00000393454 DUX5Q96PT3 197 aa6.74□□□□□ -1.33
TDP1-203ENST00000393454 OR51M1Q9H341 326 aa6.74□□□□□ -1.33
TDP1-203ENST00000393454 YTHDF2Q9Y5A9 579 aaKnown RBP6.74□□□□□ -1.33
TDP1-203ENST00000393454 FAM74A7A6NL05 159 aa6.73□□□□□ -1.33
TDP1-203ENST00000393454 H3BQ15 152 aa6.73□□□□□ -1.33
TDP1-203ENST00000393454 CTSGP08311 255 aa6.73□□□□□ -1.33
TDP1-203ENST00000393454 SNRPCP09234 159 aaKnown RBP6.73□□□□□ -1.33
TDP1-203ENST00000393454 KLK9Q2XQG4 91 aa6.73□□□□□ -1.33
TDP1-203ENST00000393454 TMEM95Q3KNT9 176 aa6.73□□□□□ -1.33
TDP1-203ENST00000393454 C19orf54Q5BKX5 351 aa6.73□□□□□ -1.33
TDP1-203ENST00000393454 LEMD1Q68G75 181 aa6.73□□□□□ -1.33
TDP1-203ENST00000393454 ZNF491Q8N8L2 437 aa6.73□□□□□ -1.33
TDP1-203ENST00000393454 RNF125Q96EQ8 232 aa6.73□□□□□ -1.33
TDP1-203ENST00000393454 NIPSNAP3BQ9BS92 247 aa6.73□□□□□ -1.33
TDP1-203ENST00000393454 CHRDL1Q9BU40 450 aa6.73□□□□□ -1.33
TDP1-203ENST00000393454 SLC25A39Q9BZJ4 359 aaPredicted RBP6.73□□□□□ -1.33
TDP1-203ENST00000393454 KLK9Q9UKQ9 250 aa6.73□□□□□ -1.33
TDP1-203ENST00000393454 ACANP16112 2415 aa6.73□□□□□ -1.33
TDP1-203ENST00000393454 TRBV7-1A0A0A6YYK4 115 aa6.73□□□□□ -1.33
TDP1-203ENST00000393454 IGHV3-35A0A0C4DH35 117 aa6.73□□□□□ -1.33
TDP1-203ENST00000393454 FAM223BA6NKX1 122 aa6.73□□□□□ -1.33
TDP1-203ENST00000393454 ZNF727A8MUV8 499 aa6.73□□□□□ -1.33
TDP1-203ENST00000393454 TMEM250H0YL14 139 aa6.73□□□□□ -1.33
TDP1-203ENST00000393454 PDE6DO43924 150 aa6.73□□□□□ -1.33
TDP1-203ENST00000393454 FCGR2BP31994 310 aaPredicted RBP6.73□□□□□ -1.33
TDP1-203ENST00000393454 FAM90A2PQ658T7 463 aa6.73□□□□□ -1.33
TDP1-203ENST00000393454 FAM223AQ8IWN6 122 aa6.73□□□□□ -1.33
TDP1-203ENST00000393454 STXBP6Q8NFX7 210 aa6.73□□□□□ -1.33
TDP1-203ENST00000393454 TVP23CQ96ET8 276 aa6.73□□□□□ -1.33
TDP1-203ENST00000393454 TXNDC17Q9BRA2 123 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms