RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 FXYD5Q96DB9 178 aa14.37□□□□□ -0.11
ACTN4-202ENST00000390009 RBM14Q96PK6 669 aaKnown RBP14.37□□□□□ -0.11
ACTN4-202ENST00000390009 RASL11BQ9BPW5 248 aa14.37□□□□□ -0.11
ACTN4-202ENST00000390009 C1RLQ9NZP8 487 aa14.37□□□□□ -0.11
ACTN4-202ENST00000390009 PSG1P11464 419 aa14.36□□□□□ -0.11
ACTN4-202ENST00000390009 TIGITQ495A1 244 aa14.36□□□□□ -0.11
ACTN4-202ENST00000390009 ZNF843Q8N446 348 aa14.36□□□□□ -0.11
ACTN4-202ENST00000390009 SFRP2Q96HF1 295 aa14.36□□□□□ -0.11
ACTN4-202ENST00000390009 PYGO2Q9BRQ0 406 aa14.36□□□□□ -0.11
ACTN4-202ENST00000390009 SPG11Q96JI7 2443 aa14.36□□□□□ -0.11
ACTN4-202ENST00000390009 HELTA6NFD8 242 aa14.36□□□□□ -0.11
ACTN4-202ENST00000390009 STXBP6Q8NFX7 210 aa14.36□□□□□ -0.11
ACTN4-202ENST00000390009 IGHV7-81A0A0B4J1V7 117 aa14.35□□□□□ -0.11
ACTN4-202ENST00000390009 MDFIC2A0A1B0GVS7 189 aa14.35□□□□□ -0.11
ACTN4-202ENST00000390009 PPP1R2P9O14990 202 aa14.35□□□□□ -0.11
ACTN4-202ENST00000390009 IGKV1-17P01599 117 aa14.35□□□□□ -0.11
ACTN4-202ENST00000390009 TRGC2P03986 189 aa14.35□□□□□ -0.11
ACTN4-202ENST00000390009 TTC9CQ8N5M4 171 aa14.35□□□□□ -0.11
ACTN4-202ENST00000390009 FANCD2OSQ96PS1 177 aa14.35□□□□□ -0.11
ACTN4-202ENST00000390009 LY96Q9Y6Y9 160 aa14.35□□□□□ -0.11
ACTN4-202ENST00000390009 ZNF462Q96JM2 2506 aa14.35□□□□□ -0.11
ACTN4-202ENST00000390009 IGLV11-55A0A075B6I3 123 aa14.35□□□□□ -0.11
ACTN4-202ENST00000390009 IGHV4-30-2A0A087WSY4 118 aa14.35□□□□□ -0.11
ACTN4-202ENST00000390009 K7EN84 100 aa14.35□□□□□ -0.11
ACTN4-202ENST00000390009 SRP14P37108 136 aaKnown RBP14.35□□□□□ -0.11
ACTN4-202ENST00000390009 LYZP61626 148 aa14.35□□□□□ -0.11
ACTN4-202ENST00000390009 TGOLN2O43493 480 aa14.34□□□□□ -0.11
ACTN4-202ENST00000390009 CLEC12BQ2HXU8 276 aa14.34□□□□□ -0.11
ACTN4-202ENST00000390009 TEX38Q6PEX7 206 aa14.34□□□□□ -0.11
ACTN4-202ENST00000390009 HIGD1AQ9Y241 93 aa14.34□□□□□ -0.11
ACTN4-202ENST00000390009 A0A1W2PPQ1 181 aa14.33□□□□□ -0.11
ACTN4-202ENST00000390009 HLA-DRB1P01911 266 aa14.33□□□□□ -0.11
ACTN4-202ENST00000390009 RD3LP0DJH9 198 aa14.33□□□□□ -0.11
ACTN4-202ENST00000390009 EGR2P11161 476 aaPredicted RBP14.33□□□□□ -0.11
ACTN4-202ENST00000390009 GNG4P50150 75 aa14.33□□□□□ -0.11
ACTN4-202ENST00000390009 CENPWQ5EE01 88 aa14.33□□□□□ -0.11
ACTN4-202ENST00000390009 SNRPCP09234 159 aaKnown RBP14.33□□□□□ -0.12
ACTN4-202ENST00000390009 HOXA5P20719 270 aa14.33□□□□□ -0.12
ACTN4-202ENST00000390009 KCNIP4Q6PIL6 250 aa14.33□□□□□ -0.12
ACTN4-202ENST00000390009 S4R3C0 116 aa14.33□□□□□ -0.12
ACTN4-202ENST00000390009 GGCTO75223 188 aaKnown RBP14.32□□□□□ -0.12
ACTN4-202ENST00000390009 LEMD1Q68G75 181 aa14.32□□□□□ -0.12
ACTN4-202ENST00000390009 ZNF329Q86UD4 541 aa14.32□□□□□ -0.12
ACTN4-202ENST00000390009 SRD5A3Q9H8P0 318 aa14.32□□□□□ -0.12
ACTN4-202ENST00000390009 UTP20O75691 2785 aaKnown RBP14.32□□□□□ -0.12
ACTN4-202ENST00000390009 CRYBG3Q68DQ2 2970 aa14.32□□□□□ -0.12
ACTN4-202ENST00000390009 IGHV3OR16-10A0A075B7F0 116 aa14.32□□□□□ -0.12
ACTN4-202ENST00000390009 IFITM10A6NMD0 228 aa14.32□□□□□ -0.12
ACTN4-202ENST00000390009 PYY3Q5JQD4 70 aa14.32□□□□□ -0.12
ACTN4-202ENST00000390009 OR10G8Q8NGN5 311 aa14.32□□□□□ -0.12
ACTN4-202ENST00000390009 NRGNQ92686 78 aa14.32□□□□□ -0.12
ACTN4-202ENST00000390009 HSPB9Q9BQS6 159 aa14.32□□□□□ -0.12
ACTN4-202ENST00000390009 PPP5D1E7EU14 171 aa14.31□□□□□ -0.12
ACTN4-202ENST00000390009 HIST1H2BKO60814 126 aa14.31□□□□□ -0.12
ACTN4-202ENST00000390009 HIST1H2BJP06899 126 aa14.31□□□□□ -0.12
ACTN4-202ENST00000390009 GP9P14770 177 aa14.31□□□□□ -0.12
ACTN4-202ENST00000390009 HIST1H2BOP23527 126 aa14.31□□□□□ -0.12
ACTN4-202ENST00000390009 HIST1H2BBP33778 126 aa14.31□□□□□ -0.12
ACTN4-202ENST00000390009 CDX1P47902 265 aaPredicted RBP14.31□□□□□ -0.12
ACTN4-202ENST00000390009 FAM3BP58499 235 aaPredicted RBP14.31□□□□□ -0.12
ACTN4-202ENST00000390009 HIST1H2BDP58876 126 aa14.31□□□□□ -0.12
ACTN4-202ENST00000390009 HIST1H2BCP62807 126 aa14.31□□□□□ -0.12
ACTN4-202ENST00000390009 HIST2H2BEQ16778 126 aa14.31□□□□□ -0.12
ACTN4-202ENST00000390009 C9orf152Q5JTZ5 239 aa14.31□□□□□ -0.12
ACTN4-202ENST00000390009 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.31□□□□□ -0.12
ACTN4-202ENST00000390009 BLNKQ8WV28 456 aa14.31□□□□□ -0.12
ACTN4-202ENST00000390009 HIST1H2BHQ93079 126 aa14.31□□□□□ -0.12
ACTN4-202ENST00000390009 IMMP2LQ96T52 175 aa14.31□□□□□ -0.12
ACTN4-202ENST00000390009 HIST1H2BNQ99877 126 aa14.31□□□□□ -0.12
ACTN4-202ENST00000390009 HIST1H2BMQ99879 126 aa14.31□□□□□ -0.12
ACTN4-202ENST00000390009 IGHV1-69DA0A0B4J2H0 117 aa14.3□□□□□ -0.12
ACTN4-202ENST00000390009 IGHV1-69P01742 117 aa14.3□□□□□ -0.12
ACTN4-202ENST00000390009 NBEAP1P0C6P0 100 aa14.3□□□□□ -0.12
ACTN4-202ENST00000390009 RANP62826 216 aaKnown RBP14.3□□□□□ -0.12
ACTN4-202ENST00000390009 SRSF1Q07955 248 aaKnown RBP eCLIP14.3□□□□□ -0.122e-6■■□□□ 11.4
ACTN4-202ENST00000390009 SLC25A39Q9BZJ4 359 aaPredicted RBP14.3□□□□□ -0.12
ACTN4-202ENST00000390009 THYN1Q9P016 225 aa14.3□□□□□ -0.12
ACTN4-202ENST00000390009 MRPL27Q9P0M9 148 aaKnown RBP14.3□□□□□ -0.12
ACTN4-202ENST00000390009 TRAV40A0A0B4J280 105 aa14.3□□□□□ -0.12
ACTN4-202ENST00000390009 GNG7O60262 68 aa14.3□□□□□ -0.12
ACTN4-202ENST00000390009 TOMM40O96008 361 aa14.3□□□□□ -0.12
ACTN4-202ENST00000390009 MYCNOSP40205 109 aa14.3□□□□□ -0.12
ACTN4-202ENST00000390009 MFAP4P55083 255 aa14.3□□□□□ -0.12
ACTN4-202ENST00000390009 FRZBQ92765 325 aa14.3□□□□□ -0.12
ACTN4-202ENST00000390009 TRAV30A0A087WSZ9 112 aa14.29□□□□□ -0.12
ACTN4-202ENST00000390009 PHOX2AO14813 284 aa14.29□□□□□ -0.12
ACTN4-202ENST00000390009 FOXL1Q12952 345 aa14.29□□□□□ -0.12
ACTN4-202ENST00000390009 OR5I1Q13606 314 aa14.29□□□□□ -0.12
ACTN4-202ENST00000390009 SGMS2Q8NHU3 365 aa14.29□□□□□ -0.12
ACTN4-202ENST00000390009 IGF2BP2-AS1Q96M15 143 aa14.29□□□□□ -0.12
ACTN4-202ENST00000390009 ZNF48Q96MX3 618 aaPredicted RBP14.29□□□□□ -0.12
ACTN4-202ENST00000390009 F8W735 103 aaPredicted RBP14.29□□□□□ -0.12
ACTN4-202ENST00000390009 OR2J3O76001 311 aa14.29□□□□□ -0.12
ACTN4-202ENST00000390009 S100A2P29034 98 aa14.29□□□□□ -0.12
ACTN4-202ENST00000390009 BRD3OSQ6XYD6 125 aa14.29□□□□□ -0.12
ACTN4-202ENST00000390009 ZNF491Q8N8L2 437 aa14.29□□□□□ -0.12
ACTN4-202ENST00000390009 CDC42EP3Q9UKI2 254 aa14.29□□□□□ -0.12
ACTN4-202ENST00000390009 PEX7O00628 323 aa14.28□□□□□ -0.12
ACTN4-202ENST00000390009 NDUFB8O95169 186 aa14.28□□□□□ -0.12
ACTN4-202ENST00000390009 TRGC1P0CF51 173 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms