RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 TMEM105Q8N8V8 129 aa11.71□□□□□ -0.53
RTF1-201ENST00000389629 FREM1Q5H8C1 2179 aa11.71□□□□□ -0.53
RTF1-201ENST00000389629 CREBBPQ92793 2442 aa11.71□□□□□ -0.53
RTF1-201ENST00000389629 IL4P05112 153 aa11.71□□□□□ -0.53
RTF1-201ENST00000389629 DEFB123Q8N688 67 aa11.71□□□□□ -0.53
RTF1-201ENST00000389629 DEFB124Q8NES8 71 aa11.71□□□□□ -0.53
RTF1-201ENST00000389629 YPEL4Q96NS1 127 aa11.71□□□□□ -0.53
RTF1-201ENST00000389629 ATP5IP56385 69 aaPredicted RBP11.71□□□□□ -0.54
RTF1-201ENST00000389629 RBPJQ06330 500 aa11.71□□□□□ -0.54
RTF1-201ENST00000389629 TMEM186Q96B77 213 aa11.71□□□□□ -0.54
RTF1-201ENST00000389629 SPRR3Q9UBC9 169 aa11.71□□□□□ -0.54
RTF1-201ENST00000389629 C2orf16Q68DN1 1984 aa11.71□□□□□ -0.54
RTF1-201ENST00000389629 TRAV8-1A0A0A6YYK1 113 aa11.7□□□□□ -0.54
RTF1-201ENST00000389629 PRCDQ00LT1 54 aa11.7□□□□□ -0.54
RTF1-201ENST00000389629 KIR3DL3Q8N743 410 aa11.7□□□□□ -0.54
RTF1-201ENST00000389629 FAM169BQ8N8A8 192 aa11.7□□□□□ -0.54
RTF1-201ENST00000389629 TIMD4Q96H15 378 aa11.7□□□□□ -0.54
RTF1-201ENST00000389629 MED13LQ71F56 2210 aa11.7□□□□□ -0.54
RTF1-201ENST00000389629 FAM90A9PA6NNJ1 464 aa11.7□□□□□ -0.54
RTF1-201ENST00000389629 FRMD6-AS1P0C7T7 363 aa11.7□□□□□ -0.54
RTF1-201ENST00000389629 KIR3DS1Q14943 382 aa11.7□□□□□ -0.54
RTF1-201ENST00000389629 CIARTQ8N365 385 aaPredicted RBP11.7□□□□□ -0.54
RTF1-201ENST00000389629 TRBV20OR9-2A0A075B6H5 130 aa11.7□□□□□ -0.54
RTF1-201ENST00000389629 C9orf172C9J069 976 aa11.7□□□□□ -0.54
RTF1-201ENST00000389629 MC5RP33032 325 aa11.7□□□□□ -0.54
RTF1-201ENST00000389629 BMI1P35226 326 aa11.7□□□□□ -0.54
RTF1-201ENST00000389629 Q6ZSR3 168 aa11.7□□□□□ -0.54
RTF1-201ENST00000389629 ATP5L2Q7Z4Y8 100 aa11.7□□□□□ -0.54
RTF1-201ENST00000389629 WDR86Q86TI4 376 aa11.7□□□□□ -0.54
RTF1-201ENST00000389629 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.7□□□□□ -0.54
RTF1-201ENST00000389629 OSR1Q8TAX0 266 aaPredicted RBP11.7□□□□□ -0.54
RTF1-201ENST00000389629 RNF138Q8WVD3 245 aa11.7□□□□□ -0.54
RTF1-201ENST00000389629 C11orf1Q9H5F2 150 aa11.7□□□□□ -0.54
RTF1-201ENST00000389629 MRPL16Q9NX20 251 aaKnown RBP11.7□□□□□ -0.54
RTF1-201ENST00000389629 OR5A1Q8NGJ0 315 aa11.7□□□□□ -0.54
RTF1-201ENST00000389629 OR1N2Q8NGR9 330 aa11.7□□□□□ -0.54
RTF1-201ENST00000389629 DPF1Q92782 380 aa11.7□□□□□ -0.54
RTF1-201ENST00000389629 SPTAN1Q13813 2472 aaKnown RBP11.7□□□□□ -0.54
RTF1-201ENST00000389629 IGHV2-26A0A0B4J1V2 119 aa11.69□□□□□ -0.54
RTF1-201ENST00000389629 ESDP10768 282 aa11.69□□□□□ -0.54
RTF1-201ENST00000389629 PRB3Q04118 309 aaPredicted RBP11.69□□□□□ -0.54
RTF1-201ENST00000389629 PCNX1Q96RV3 2341 aa11.69□□□□□ -0.54
RTF1-201ENST00000389629 CDKN1BP46527 198 aa11.69□□□□□ -0.54
RTF1-201ENST00000389629 HSD52Q0P140 79 aa11.69□□□□□ -0.54
RTF1-201ENST00000389629 HERVK_113P61574 105 aa11.69□□□□□ -0.54
RTF1-201ENST00000389629 TIMM23BQ5SRD1 257 aa11.69□□□□□ -0.54
RTF1-201ENST00000389629 Q8NFD4 153 aa11.69□□□□□ -0.54
RTF1-201ENST00000389629 OR4X2Q8NGF9 303 aa11.69□□□□□ -0.54
RTF1-201ENST00000389629 ASCL2Q99929 193 aa11.69□□□□□ -0.54
RTF1-201ENST00000389629 IGHV3OR16-8A0A075B7F1 116 aa11.69□□□□□ -0.54
RTF1-201ENST00000389629 TMEM238LA0A1B0GVL6 79 aa11.69□□□□□ -0.54
RTF1-201ENST00000389629 A6NJY4 79 aa11.69□□□□□ -0.54
RTF1-201ENST00000389629 OR11H12B2RN74 326 aa11.69□□□□□ -0.54
RTF1-201ENST00000389629 M0R3E3 92 aa11.69□□□□□ -0.54
RTF1-201ENST00000389629 C9orf106Q8NAJ2 232 aa11.69□□□□□ -0.54
RTF1-201ENST00000389629 OR11H1Q8NG94 326 aa11.69□□□□□ -0.54
RTF1-201ENST00000389629 OR11H2Q8NH07 326 aa11.69□□□□□ -0.54
RTF1-201ENST00000389629 Q6ZPA2 131 aa11.68□□□□□ -0.54
RTF1-201ENST00000389629 SPACA3Q8IXA5 215 aa11.68□□□□□ -0.54
RTF1-201ENST00000389629 AHRRA9YTQ3 701 aa11.68□□□□□ -0.54
RTF1-201ENST00000389629 CCL3L1P16619 93 aa11.68□□□□□ -0.54
RTF1-201ENST00000389629 TCRBV4S1A1TA0A5B7 111 aa11.68□□□□□ -0.54
RTF1-201ENST00000389629 GGTLC3B5MD39 225 aa11.68□□□□□ -0.54
RTF1-201ENST00000389629 BCL6BQ8N143 479 aaPredicted RBP11.68□□□□□ -0.54
RTF1-201ENST00000389629 IFI27L1Q96BM0 104 aa11.68□□□□□ -0.54
RTF1-201ENST00000389629 OR4A5Q8NH83 315 aa11.68□□□□□ -0.54
RTF1-201ENST00000389629 GTF3C1Q12789 2109 aa11.68□□□□□ -0.54
RTF1-201ENST00000389629 HBDP02042 147 aa11.67□□□□□ -0.54
RTF1-201ENST00000389629 DLX1P56177 255 aa11.67□□□□□ -0.54
RTF1-201ENST00000389629 PAX2Q02962 417 aa11.67□□□□□ -0.54
RTF1-201ENST00000389629 RASL11AQ6T310 242 aa11.67□□□□□ -0.54
RTF1-201ENST00000389629 GFRALQ6UXV0 394 aa11.67□□□□□ -0.54
RTF1-201ENST00000389629 ODF3L1Q8IXM7 274 aa11.67□□□□□ -0.54
RTF1-201ENST00000389629 TEX45Q8NA69 505 aa11.67□□□□□ -0.54
RTF1-201ENST00000389629 FER1L6-AS1Q8NA97 138 aa11.67□□□□□ -0.54
RTF1-201ENST00000389629 FDCSPQ8NFU4 85 aa11.67□□□□□ -0.54
RTF1-201ENST00000389629 IGHV3OR16-13A0A075B7E8 117 aa11.67□□□□□ -0.54
RTF1-201ENST00000389629 IGHV3-74A0A0B4J1X5 117 aa11.67□□□□□ -0.54
RTF1-201ENST00000389629 GLRXP35754 106 aa11.67□□□□□ -0.54
RTF1-201ENST00000389629 EXOC3-AS1Q8N2X6 119 aa11.67□□□□□ -0.54
RTF1-201ENST00000389629 NDUFA3O95167 84 aa11.67□□□□□ -0.54
RTF1-201ENST00000389629 LEPP41159 167 aa11.67□□□□□ -0.54
RTF1-201ENST00000389629 PRR7Q8TB68 274 aa11.67□□□□□ -0.54
RTF1-201ENST00000389629 APOMO95445 188 aa11.67□□□□□ -0.54
RTF1-201ENST00000389629 ZNF788Q6ZQV5 615 aa11.67□□□□□ -0.54
RTF1-201ENST00000389629 FOXA2Q9Y261 457 aaPredicted RBP11.67□□□□□ -0.54
RTF1-201ENST00000389629 LY6G6EA0A0G2JKS1 128 aa11.66□□□□□ -0.54
RTF1-201ENST00000389629 DKK1O94907 266 aa11.66□□□□□ -0.54
RTF1-201ENST00000389629 U3KQA8 63 aa11.66□□□□□ -0.54
RTF1-201ENST00000389629 TRGV8A0A0C4DH27 118 aa11.66□□□□□ -0.54
RTF1-201ENST00000389629 NCR2O95944 276 aa11.66□□□□□ -0.54
RTF1-201ENST00000389629 LOXL3P58215 753 aa11.66□□□□□ -0.54
RTF1-201ENST00000389629 VWC2Q2TAL6 325 aa11.66□□□□□ -0.54
RTF1-201ENST00000389629 CACNA1BQ00975 2339 aa11.66□□□□□ -0.54
RTF1-201ENST00000389629 OR5AN1Q8NGI8 311 aa11.66□□□□□ -0.54
RTF1-201ENST00000389629 FAM168AQ92567 244 aa11.66□□□□□ -0.54
RTF1-201ENST00000389629 PRDM6Q9NQX0 595 aa11.66□□□□□ -0.54
RTF1-201ENST00000389629 SRRM5B3KS81 715 aa11.66□□□□□ -0.54
RTF1-201ENST00000389629 SS18L1O75177 396 aaPredicted RBP11.66□□□□□ -0.54
RTF1-201ENST00000389629 ZNF479Q96JC4 524 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms