RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 TRAV8-1A0A0A6YYK1 113 aa10.78□□□□□ -0.68
TRAPPC9-201ENST00000389328 SYS1-DBNDD2H3BUS1 97 aa10.78□□□□□ -0.68
TRAPPC9-201ENST00000389328 K7EN84 100 aa10.78□□□□□ -0.68
TRAPPC9-201ENST00000389328 FXYD7P58549 80 aa10.78□□□□□ -0.68
TRAPPC9-201ENST00000389328 C11orf1Q9H5F2 150 aa10.78□□□□□ -0.68
TRAPPC9-201ENST00000389328 MRPS16Q9Y3D3 137 aaKnown RBP10.78□□□□□ -0.68
TRAPPC9-201ENST00000389328 CRIP3Q6Q6R5 217 aa10.78□□□□□ -0.68
TRAPPC9-201ENST00000389328 PRR7Q8TB68 274 aa10.78□□□□□ -0.68
TRAPPC9-201ENST00000389328 IGKV1-16P04430 117 aa10.78□□□□□ -0.68
TRAPPC9-201ENST00000389328 MGPP08493 103 aa10.78□□□□□ -0.68
TRAPPC9-201ENST00000389328 IGLL1P15814 213 aa10.78□□□□□ -0.68
TRAPPC9-201ENST00000389328 CIARTQ8N365 385 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC9-201ENST00000389328 Q8NFD4 153 aa10.78□□□□□ -0.68
TRAPPC9-201ENST00000389328 ZNRD1Q9P1U0 126 aa10.78□□□□□ -0.68
TRAPPC9-201ENST00000389328 ABCA4P78363 2273 aa10.78□□□□□ -0.68
TRAPPC9-201ENST00000389328 FAM90A27PA6NNH2 459 aa10.77□□□□□ -0.68
TRAPPC9-201ENST00000389328 GGTLC3B5MD39 225 aa10.77□□□□□ -0.68
TRAPPC9-201ENST00000389328 Q6ZPA2 131 aa10.77□□□□□ -0.68
TRAPPC9-201ENST00000389328 TEX45Q8NA69 505 aa10.77□□□□□ -0.68
TRAPPC9-201ENST00000389328 KIAA1549LQ6ZVL6 1849 aa10.77□□□□□ -0.68
TRAPPC9-201ENST00000389328 IGKV1D-17A0A075B6S4 117 aa10.77□□□□□ -0.69
TRAPPC9-201ENST00000389328 IGHV1-18A0A0C4DH31 117 aa10.77□□□□□ -0.69
TRAPPC9-201ENST00000389328 ODF3L1Q8IXM7 274 aa10.77□□□□□ -0.69
TRAPPC9-201ENST00000389328 OR2K2Q8NGT1 345 aa10.77□□□□□ -0.69
TRAPPC9-201ENST00000389328 CHCHD1Q96BP2 118 aaKnown RBP10.77□□□□□ -0.69
TRAPPC9-201ENST00000389328 YPEL4Q96NS1 127 aa10.77□□□□□ -0.69
TRAPPC9-201ENST00000389328 IGHV3OR16-13A0A075B7E8 117 aa10.77□□□□□ -0.69
TRAPPC9-201ENST00000389328 TRAV30A0A087WSZ9 112 aa10.77□□□□□ -0.69
TRAPPC9-201ENST00000389328 IGHV3-74A0A0B4J1X5 117 aa10.77□□□□□ -0.69
TRAPPC9-201ENST00000389328 ATP5L2Q7Z4Y8 100 aa10.77□□□□□ -0.69
TRAPPC9-201ENST00000389328 PRDM6Q9NQX0 595 aa10.77□□□□□ -0.69
TRAPPC9-201ENST00000389328 PSMB2P49721 201 aa10.76□□□□□ -0.69
TRAPPC9-201ENST00000389328 ECSCRQ19T08 205 aa10.76□□□□□ -0.69
TRAPPC9-201ENST00000389328 ORMDL3Q8N138 153 aa10.76□□□□□ -0.69
TRAPPC9-201ENST00000389328 PCDH15Q96QU1 1955 aa10.76□□□□□ -0.69
TRAPPC9-201ENST00000389328 YLPM1P49750 1951 aaKnown RBP10.76□□□□□ -0.69
TRAPPC9-201ENST00000389328 VDAC2P45880 294 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC9-201ENST00000389328 FAM90A1Q86YD7 464 aa10.76□□□□□ -0.69
TRAPPC9-201ENST00000389328 EXOC3-AS1Q8N2X6 119 aa10.76□□□□□ -0.69
TRAPPC9-201ENST00000389328 JKAMPQ9P055 326 aa10.76□□□□□ -0.69
TRAPPC9-201ENST00000389328 TM4SF5O14894 197 aa10.76□□□□□ -0.69
TRAPPC9-201ENST00000389328 SS18L1O75177 396 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC9-201ENST00000389328 CENPVQ7Z7K6 275 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC9-201ENST00000389328 ZNF257Q9Y2Q1 563 aa10.76□□□□□ -0.69
TRAPPC9-201ENST00000389328 NUP210Q8TEM1 1887 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC9-201ENST00000389328 TRBV20OR9-2A0A075B6H5 130 aa10.76□□□□□ -0.69
TRAPPC9-201ENST00000389328 GAGE12BA1L429 117 aa10.76□□□□□ -0.69
TRAPPC9-201ENST00000389328 CD3EP07766 207 aa10.76□□□□□ -0.69
TRAPPC9-201ENST00000389328 TIMM23BQ5SRD1 257 aa10.76□□□□□ -0.69
TRAPPC9-201ENST00000389328 C1orf185Q5T7R7 199 aa10.76□□□□□ -0.69
TRAPPC9-201ENST00000389328 Q6ZSR3 168 aa10.76□□□□□ -0.69
TRAPPC9-201ENST00000389328 ASCL2Q99929 193 aa10.76□□□□□ -0.69
TRAPPC9-201ENST00000389328 OBSL1O75147 1896 aa10.75□□□□□ -0.69
TRAPPC9-201ENST00000389328 FRMD6-AS1P0C7T7 363 aa10.75□□□□□ -0.69
TRAPPC9-201ENST00000389328 ERVK11-1P61568 191 aa10.75□□□□□ -0.69
TRAPPC9-201ENST00000389328 C1orf162Q8NEQ5 155 aaPredicted RBP10.75□□□□□ -0.69
TRAPPC9-201ENST00000389328 IGHV3-23P01764 117 aa10.75□□□□□ -0.69
TRAPPC9-201ENST00000389328 TMEM30BQ3MIR4 351 aa10.75□□□□□ -0.69
TRAPPC9-201ENST00000389328 LINC00312Q9Y6C7 94 aa10.75□□□□□ -0.69
TRAPPC9-201ENST00000389328 RPUSD1Q9UJJ7 312 aaKnown RBP10.75□□□□□ -0.69
TRAPPC9-201ENST00000389328 PRR14LQ5THK1 2151 aa10.74□□□□□ -0.69
TRAPPC9-201ENST00000389328 GUSBP1Q15486 140 aa10.74□□□□□ -0.69
TRAPPC9-201ENST00000389328 RASL11AQ6T310 242 aa10.74□□□□□ -0.69
TRAPPC9-201ENST00000389328 FOXC2Q99958 501 aa10.74□□□□□ -0.69
TRAPPC9-201ENST00000389328 LSM4Q9Y4Z0 139 aaKnown RBP10.74□□□□□ -0.69
TRAPPC9-201ENST00000389328 NHP2Q9NX24 153 aaKnown RBP10.74□□□□□ -0.69
TRAPPC9-201ENST00000389328 SPACA3Q8IXA5 215 aa10.74□□□□□ -0.69
TRAPPC9-201ENST00000389328 RNF138Q8WVD3 245 aa10.74□□□□□ -0.69
TRAPPC9-201ENST00000389328 C5orf30Q96GV9 206 aa10.74□□□□□ -0.69
TRAPPC9-201ENST00000389328 GOSR1O95249 250 aa10.74□□□□□ -0.69
TRAPPC9-201ENST00000389328 MFAP4P55083 255 aa10.74□□□□□ -0.69
TRAPPC9-201ENST00000389328 OTORQ9NRC9 128 aa10.74□□□□□ -0.69
TRAPPC9-201ENST00000389328 BPTFQ12830 3046 aa10.73□□□□□ -0.69
TRAPPC9-201ENST00000389328 RNASE2P10153 161 aaKnown RBP10.73□□□□□ -0.69
TRAPPC9-201ENST00000389328 LYRM7Q5U5X0 104 aa10.73□□□□□ -0.69
TRAPPC9-201ENST00000389328 CST9LQ9H4G1 147 aa10.73□□□□□ -0.69
TRAPPC9-201ENST00000389328 Q5PR19 223 aa10.73□□□□□ -0.69
TRAPPC9-201ENST00000389328 FAM168AQ92567 244 aa10.73□□□□□ -0.69
TRAPPC9-201ENST00000389328 PSG8Q9UQ74 426 aa10.73□□□□□ -0.69
TRAPPC9-201ENST00000389328 TCRAP04437 139 aa10.73□□□□□ -0.69
TRAPPC9-201ENST00000389328 TMEM78Q5T7P6 136 aa10.73□□□□□ -0.69
TRAPPC9-201ENST00000389328 MS4A6AQ9H2W1 248 aa10.73□□□□□ -0.69
TRAPPC9-201ENST00000389328 SEC11AP67812 179 aa10.72□□□□□ -0.69
TRAPPC9-201ENST00000389328 OR5AN1Q8NGI8 311 aa10.72□□□□□ -0.69
TRAPPC9-201ENST00000389328 PPIAL4CA0A0B4J2A2 164 aa10.72□□□□□ -0.69
TRAPPC9-201ENST00000389328 H7C2G1 150 aa10.72□□□□□ -0.69
TRAPPC9-201ENST00000389328 CCL25O15444 150 aa10.72□□□□□ -0.69
TRAPPC9-201ENST00000389328 PPIAL4GP0DN37 164 aa10.72□□□□□ -0.69
TRAPPC9-201ENST00000389328 OCIAD2Q56VL3 154 aa10.72□□□□□ -0.69
TRAPPC9-201ENST00000389328 SFTA2Q6UW10 78 aa10.72□□□□□ -0.69
TRAPPC9-201ENST00000389328 ZNF788Q6ZQV5 615 aa10.72□□□□□ -0.69
TRAPPC9-201ENST00000389328 IGHV3-49A0A0A0MS15 119 aa10.72□□□□□ -0.69
TRAPPC9-201ENST00000389328 LY6G6EA0A0G2JKS1 128 aa10.72□□□□□ -0.69
TRAPPC9-201ENST00000389328 ZNF329Q86UD4 541 aa10.72□□□□□ -0.69
TRAPPC9-201ENST00000389328 U3KQA8 63 aa10.72□□□□□ -0.69
TRAPPC9-201ENST00000389328 DKK1O94907 266 aa10.72□□□□□ -0.69
TRAPPC9-201ENST00000389328 HBDP02042 147 aa10.72□□□□□ -0.69
TRAPPC9-201ENST00000389328 PPIFP30405 207 aaKnown RBP10.72□□□□□ -0.69
TRAPPC9-201ENST00000389328 ZNF134P52741 427 aa10.72□□□□□ -0.69
TRAPPC9-201ENST00000389328 RPS20P60866 119 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms