RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 ORM2P19652 201 aa-3.97□□□□□ -3.04
RNU6-1340P-201ENST00000384438 RAB5AP20339 215 aa-3.97□□□□□ -3.04
RNU6-1340P-201ENST00000384438 CDKN2CP42773 168 aa-3.97□□□□□ -3.04
RNU6-1340P-201ENST00000384438 DNASE1L1P49184 302 aa-3.97□□□□□ -3.04
RNU6-1340P-201ENST00000384438 PSMB3P49720 205 aa-3.97□□□□□ -3.04
RNU6-1340P-201ENST00000384438 AP1S2P56377 157 aa-3.97□□□□□ -3.04
RNU6-1340P-201ENST00000384438 C21orf59P57076 290 aa-3.97□□□□□ -3.04
RNU6-1340P-201ENST00000384438 RPL30P62888 115 aaKnown RBP-3.97□□□□□ -3.04
RNU6-1340P-201ENST00000384438 ZNHIT3Q15649 155 aaPredicted RBP-3.97□□□□□ -3.04
RNU6-1340P-201ENST00000384438 CCDC183Q5T5S1 534 aa-3.97□□□□□ -3.04
RNU6-1340P-201ENST00000384438 NDUFAF7Q7L592 441 aa-3.97□□□□□ -3.04
RNU6-1340P-201ENST00000384438 SSX8Q7RTT4 187 aa-3.97□□□□□ -3.04
RNU6-1340P-201ENST00000384438 SZRD1Q7Z422 152 aa-3.97□□□□□ -3.04
RNU6-1340P-201ENST00000384438 GRPEL2Q8TAA5 225 aa-3.97□□□□□ -3.04
RNU6-1340P-201ENST00000384438 RAB37Q96AX2 223 aa-3.97□□□□□ -3.04
RNU6-1340P-201ENST00000384438 JAKMIP1Q96N16 626 aaKnown RBP-3.97□□□□□ -3.04
RNU6-1340P-201ENST00000384438 NPVFQ9HCQ7 196 aa-3.97□□□□□ -3.04
RNU6-1340P-201ENST00000384438 C3orf18Q9UK00 162 aa-3.97□□□□□ -3.04
RNU6-1340P-201ENST00000384438 B9D1Q9UPM9 204 aa-3.97□□□□□ -3.04
RNU6-1340P-201ENST00000384438 CUX1P39880 1505 aa-3.97□□□□□ -3.05
RNU6-1340P-201ENST00000384438 A0A096LPI6 279 aa-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 TEX50A0A1B0GTY4 177 aa-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 PQLC2LA1A4F0 135 aa-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 A8MTW9 85 aa-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 FABP5P3A8MUU1 101 aa-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 H0YJX3 145 aa-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 KPNA4O00629 521 aaPredicted RBP-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 HSF2BPO75031 334 aa-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 CST1P01037 141 aa-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 CSN1S1P47710 185 aa-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 SULT1A1P50225 295 aa-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 CDK6Q00534 326 aa-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 SETQ01105 290 aaPredicted RBP-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 SPAG1Q07617 926 aa-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 TOMM34Q15785 309 aaPredicted RBP-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 C9orf152Q5JTZ5 239 aa-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 PYHIN1Q6K0P9 492 aa-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 KCNIP4Q6PIL6 250 aa-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 HEPN1Q6WQI6 88 aa-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 SPATA19Q7Z5L4 167 aa-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 KATNAL2Q8IYT4 538 aa-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 OR4K15Q8NH41 348 aa-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 GDAP1Q8TB36 358 aa-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 TRMT10AQ8TBZ6 339 aaKnown RBP-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 TMEM234Q8WY98 164 aa-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 DYNLL2Q96FJ2 89 aa-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 MTMR9Q96QG7 549 aa-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 FAM213AQ9BRX8 229 aa-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 NMRAL1Q9HBL8 299 aa-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 UQCC1Q9NVA1 299 aa-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 CHCHD3Q9NX63 227 aaKnown RBP-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 CRIPTQ9P021 101 aa-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 CHRNA9Q9UGM1 479 aa-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 LY96Q9Y6Y9 160 aa-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 ARHGEF28Q8N1W1 1705 aaKnown RBP-3.98□□□□□ -3.05
RNU6-1340P-201ENST00000384438 TRPM1Q7Z4N2 1603 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 TRAV27A0A087WT01 109 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 URADA6NGE7 173 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 TMEM238C9JI98 176 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 PDCD6O75340 191 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 PTP4A3O75365 173 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 CXCL10P02778 98 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 SERPINE1P05121 402 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 CCKP06307 115 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 MX1P20591 662 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 OR1E1P30953 314 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 PHBP35232 272 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 MARCKSL1P49006 195 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 RAB25P57735 213 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 PSMD5Q16401 504 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 CARTPTQ16568 116 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 AKAP14Q86UN6 197 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 CD302Q8IX05 232 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 Q8N8P6 123 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 OR5D18Q8NGL1 313 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 OR13C2Q8NGS9 318 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 OR13C9Q8NGT0 318 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 OR10X1Q8NGY0 326 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 OR5AK2Q8NH90 309 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 OR2M4Q96R27 311 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 NAA11Q9BSU3 229 aaPredicted RBP-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 XPO4Q9C0E2 1151 aaKnown RBP-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 SPC25Q9HBM1 224 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 BCL2L10Q9HD36 194 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 HIGD1BQ9P298 99 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 TCEAL9Q9UHQ7 104 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 NDUFA12Q9UI09 145 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 PIGLQ9Y2B2 252 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 SETBP1Q9Y6X0 1596 aa-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 POLA1P09884 1462 aaPredicted RBP-3.99□□□□□ -3.05
RNU6-1340P-201ENST00000384438 YTHDC2Q9H6S0 1430 aaKnown RBP-4□□□□□ -3.05
RNU6-1340P-201ENST00000384438 OR1F1O43749 312 aa-4□□□□□ -3.05
RNU6-1340P-201ENST00000384438 PRPSAP2O60256 369 aa-4□□□□□ -3.05
RNU6-1340P-201ENST00000384438 CRCPO75575 148 aa-4□□□□□ -3.05
RNU6-1340P-201ENST00000384438 IL11P20809 199 aa-4□□□□□ -3.05
RNU6-1340P-201ENST00000384438 MAN1A1P33908 653 aa-4□□□□□ -3.05
RNU6-1340P-201ENST00000384438 HBA1P69905 142 aa-4□□□□□ -3.05
RNU6-1340P-201ENST00000384438 RPL18AQ02543 176 aaKnown RBP-4□□□□□ -3.05
RNU6-1340P-201ENST00000384438 SLAMF1Q13291 335 aa-4□□□□□ -3.05
RNU6-1340P-201ENST00000384438 KRR1Q13601 381 aaKnown RBP-4□□□□□ -3.05
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms